BLASTX nr result

ID: Coptis21_contig00010837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010837
         (1149 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94018.1| unknown [Populus trichocarpa]                          163   7e-38
ref|XP_002319603.1| predicted protein [Populus trichocarpa] gi|2...   161   3e-37
emb|CBI34242.3| unnamed protein product [Vitis vinifera]              148   3e-33
ref|XP_002328522.1| predicted protein [Populus trichocarpa] gi|2...   120   6e-25
ref|XP_002512272.1| conserved hypothetical protein [Ricinus comm...   112   1e-22

>gb|ABK94018.1| unknown [Populus trichocarpa]
          Length = 295

 Score =  163 bits (413), Expect = 7e-38
 Identities = 118/333 (35%), Positives = 163/333 (48%), Gaps = 8/333 (2%)
 Frame = -3

Query: 1129 MADYSYTNGGYMSQERTARGPRSDGWESKYGSETHSPGWGKPGFATNGVAHQDHVCKPII 950
            MA   Y+  GY S +     P SD + SK G   + P               DHVC+P+I
Sbjct: 1    MAGIGYSYRGYSSYDP----PSSDDYGSKTG---YVP---------------DHVCRPVI 38

Query: 949  VDAQGRKRPIISFGPSVDHQLNAIVTKTETIIEQLHVPQATYGNGSPTKVGQMKDYGALN 770
            +DA GRKRPIIS+   VD   +  VTKTET  +Q   P   Y +    +  +  +Y    
Sbjct: 39   IDADGRKRPIISY--RVDQNADQYVTKTETYYQQHVHPPKEYEDKEVPRWSE--EYHGAE 94

Query: 769  HGWNKPLNPSHDRPPKVDEFVSKVQSEASRANNTNPANSRYWGQXXXXXXXXXXXXXXXX 590
            + + +PL  +  RP KV+EF++KVQ EASR     P ++ Y  Q                
Sbjct: 95   NKFRRPLASADGRPQKVEEFITKVQVEASRPQEYAPWDASYRRQTPKSTGYDGYTGGYDE 154

Query: 589  XXXXXSR-WNKTSGNNVRDPYFGGYQGKNHMERDTNEEPTIITSGGWTRPSHLGWAIPPN 413
                 ++   K  GN  R+  +  Y  K    + +N EPT+ TSGGW RPSH  WA PPN
Sbjct: 155  RSGFSNKDLLKPGGNAHRNDNYDDYYRK----QGSNMEPTMNTSGGWARPSHSTWAAPPN 210

Query: 412  KDGSLTKPTNNIGAAIDYLKDATVHTAVNTPAKPWFTVPTPT-------VATIDSREARR 254
                L+  TN+I AA+  L++          AKP F+   P+         TIDS+EA R
Sbjct: 211  --APLSGATNDISAAVGLLREV---------AKPSFSTSPPSRYREPTHANTIDSKEAAR 259

Query: 253  RYGSISESPQALNRESTYSSAIDSREAVRRYGG 155
            RYG+ + S +   R+ +Y+S IDSREA R+Y G
Sbjct: 260  RYGNFNYSSRPYTRDDSYTSTIDSREAARKYSG 292


>ref|XP_002319603.1| predicted protein [Populus trichocarpa] gi|222857979|gb|EEE95526.1|
            predicted protein [Populus trichocarpa]
          Length = 296

 Score =  161 bits (407), Expect = 3e-37
 Identities = 119/328 (36%), Positives = 164/328 (50%), Gaps = 3/328 (0%)
 Frame = -3

Query: 1129 MADYSYTNGGYMSQERTARGPRSDGWESKYGSETHSPGWGKPGFATNGVAHQDHVCKPII 950
            MA   Y+  GY S +     P SD + SK G   + P               DHVC+P+I
Sbjct: 1    MAGIGYSYRGYSSYDP----PSSDDYGSKTG---YVP---------------DHVCRPVI 38

Query: 949  VDAQGRKRPIISFGPSVDHQLNAIVTKTETIIEQLHVPQATYGNGSPTKVGQMKDYGALN 770
            +DA GRKRPIIS+   VD   +  VTKTET  +Q   P   Y +    +  +  +Y    
Sbjct: 39   IDADGRKRPIISY--RVDQNADQYVTKTETYYQQHVHPPMEYEDKEVPRWSE--EYHGAE 94

Query: 769  HGWNKPLNPSHDRPPKVDEFVSKVQSEASRANNTNPANSRYWGQXXXXXXXXXXXXXXXX 590
            + + +PL  +  RP KV+EF++KVQ EASR     P ++ Y  Q                
Sbjct: 95   NKFRRPLASADGRPQKVEEFITKVQIEASRPQEYAPWDASYQRQTPKSTGYDGYTDGYDE 154

Query: 589  XXXXXSR-WNKTSGNNVR-DPYFGGYQGKNHMERDTNEEPTIITSGGWTRPSHLGWAIPP 416
                 ++   K SGN  R D  +  Y  K    + +N EPT+ TSGGW RPSH  WA PP
Sbjct: 155  RSGFSNKDLLKPSGNAHRNDNNYDDYYRK----QGSNMEPTMNTSGGWARPSHSTWAAPP 210

Query: 415  NKDGSLTKPTNNIGAAIDYLKDATVHTAVNTPAKPWFTVPTPTVA-TIDSREARRRYGSI 239
            N    L+  TN+I AA+  L++    +   +P   +     PT A TIDS+EA RRYG+ 
Sbjct: 211  N--APLSGATNDISAAVGLLREVAKPSFSTSPPSRY---REPTYANTIDSKEAARRYGNF 265

Query: 238  SESPQALNRESTYSSAIDSREAVRRYGG 155
            + S +   R+ +Y+S IDSREA R+Y G
Sbjct: 266  NFSSRPYTRDDSYTSTIDSREAARKYRG 293


>emb|CBI34242.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  148 bits (373), Expect = 3e-33
 Identities = 110/327 (33%), Positives = 151/327 (46%), Gaps = 10/327 (3%)
 Frame = -3

Query: 1123 DYSYTNGGYMSQERTARGPRSDGWESKYGSETHSPGWGKPGFATNGVAHQDHVCKPIIVD 944
            +Y Y NGG           RSDG  S  G  TH+    +      G  H DHVC+P+IVD
Sbjct: 35   EYGYWNGG-----------RSDGGYSDGGYTTHNGPREEEWRKGAGNGHADHVCRPVIVD 83

Query: 943  AQGRKRPIISFGPSVDHQLNAIVTKTETIIEQLHVPQATYGNGSPTKVGQMKDYGALNHG 764
            A GRKRPI+ F P  + +    V +TETI+     P  T                     
Sbjct: 84   AMGRKRPIVCFNPISNTE--TYVAQTETIV--FRTPAVT--------------------E 119

Query: 763  WNKPLNPSHDRPPKVDEFVSKVQSEASRA-NNTNPANSRYWGQ--XXXXXXXXXXXXXXX 593
            W +P +P HDRPP+V++F++K+Q+E S       P  +  W Q                 
Sbjct: 120  WGRPSSPVHDRPPEVEQFITKIQTEVSEVPTRHGPLTAMNWRQHHNPPKALNGTGGYGEY 179

Query: 592  XXXXXXSRWNKTSGNNV--RDPYFGGYQGKNHMERDTNEEPTIITSGGW-TRPSHLGWAI 422
                    WNK + N +   DP  G      +   D  +EPTI  S GW  RP    WA 
Sbjct: 180  GNYGKDDYWNKPNSNIIIRSDPSDG--DDDYYHRNDGTKEPTITNSNGWGGRPKQAEWAT 237

Query: 421  PPNKDGSLTKPTNNIGAAIDYLKDATVHTAVNTPAKPWFTVPTPTV----ATIDSREARR 254
            PP     LT+PT++IGAA++ LK+A + ++   P +  F  P PTV     TIDS+EA R
Sbjct: 238  PPG--SKLTRPTSDIGAAVEILKEAAMPSS-GQPVR--FATPAPTVPKYAETIDSKEAAR 292

Query: 253  RYGSISESPQALNRESTYSSAIDSREA 173
            RYG+   +P+    + T  + IDS+ A
Sbjct: 293  RYGNFKPTPRP---DLTGGTIIDSKTA 316


>ref|XP_002328522.1| predicted protein [Populus trichocarpa] gi|222838237|gb|EEE76602.1|
            predicted protein [Populus trichocarpa]
          Length = 265

 Score =  120 bits (301), Expect = 6e-25
 Identities = 101/326 (30%), Positives = 146/326 (44%), Gaps = 1/326 (0%)
 Frame = -3

Query: 1129 MADYSYTNGGYMSQERTARGPRSDGWESKYGSETHSPGWGKPGFATNGVAHQDHVCKPII 950
            MA Y +   GY +       P SD +            W K G A+      DHVC+P+I
Sbjct: 1    MARYGHAYRGYSTNST----PSSDDF------------WSKKGHAS------DHVCRPVI 38

Query: 949  VDAQGRKRPIISFGPSVDHQLNAIVTKTETIIEQ-LHVPQATYGNGSPTKVGQMKDYGAL 773
            +DA+GRK PII +G   D   +  VTKTETI +Q +H P  +    S         YGA 
Sbjct: 39   IDAEGRKMPIIFYG--ADKNADHYVTKTETIFQQHVHSPLESEYKQSTRLTDD--PYGA- 93

Query: 772  NHGWNKPLNPSHDRPPKVDEFVSKVQSEASRANNTNPANSRYWGQXXXXXXXXXXXXXXX 593
               + +P+   + RP  V+E ++KVQ++AS      P ++ YW Q               
Sbjct: 94   EDKFRRPMASVNSRPQNVEESITKVQTDAS-PPKIAPWDASYWRQAPKSTGYEGYDERNV 152

Query: 592  XXXXXXSRWNKTSGNNVRDPYFGGYQGKNHMERDTNEEPTIITSGGWTRPSHLGWAIPPN 413
                      K S N  R+  +  Y    + ++ +N+E T+ITSGGW RP+H        
Sbjct: 153  FHNKDLL---KPSSNAPRNDSYDDY----YRKQGSNKETTMITSGGWARPAH------ST 199

Query: 412  KDGSLTKPTNNIGAAIDYLKDATVHTAVNTPAKPWFTVPTPTVATIDSREARRRYGSISE 233
                + KP                 +A  +P +  +  P  T  T+DS+EA RRYG+   
Sbjct: 200  STAEVAKP-----------------SATTSPPRSRYRQPAYT-ETMDSKEAARRYGT--- 238

Query: 232  SPQALNRESTYSSAIDSREAVRRYGG 155
              +   RE +Y+S IDSREA R+Y G
Sbjct: 239  --RPSTREDSYTSTIDSREAARKYNG 262


>ref|XP_002512272.1| conserved hypothetical protein [Ricinus communis]
           gi|223548233|gb|EEF49724.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score =  112 bits (281), Expect = 1e-22
 Identities = 85/259 (32%), Positives = 117/259 (45%), Gaps = 31/259 (11%)
 Frame = -3

Query: 973 DHVCKPIIVDAQGRKRPIISFGPSVDHQLNAIVTKTETIIEQLHVPQATYGNGSPTKVGQ 794
           DHVC+P+I+DA+GRKRPI+S+GP  +  +   VT+TETI+++ H           T    
Sbjct: 30  DHVCRPVIIDAEGRKRPIVSYGPQQNSDI--YVTRTETIVKE-HFLSPFASEHKHTPYTS 86

Query: 793 MKDYGALNHGWNKPLNPSHDRPPKVDEFVSKVQSEASRANNTNPANSRYWGQXXXXXXXX 614
            + YG     W KP  P + R  K DE  ++VQ+EAS+    +P +   W +        
Sbjct: 87  PEGYGYAEERWQKPSGPVNSRLEKTDESHTRVQTEASKP-RFDPFSQANWRKTTTSPGFS 145

Query: 613 XXXXXXXXXXXXXSR--WNKTSGNNVR----DPYF--------------GGYQGKNHMER 494
                        S   W K+ GN  +    D YF              GG+   NH  R
Sbjct: 146 GNTGGQSSEFNDLSNHDWQKSGGNAYQNDNFDDYFSKHSSAMEPSMVTHGGWGRPNHNTR 205

Query: 493 D-----------TNEEPTIITSGGWTRPSHLGWAIPPNKDGSLTKPTNNIGAAIDYLKDA 347
           +           T  EP +IT G W RPS   WA PP  D  L+KPTN+I  A+  +K+A
Sbjct: 206 NAYRETVGIRESTPTEPAMITHGRWVRPSPKTWASPP--DYILSKPTNDINTAVGIMKEA 263

Query: 346 TVHTAVNTPAKPWFTVPTP 290
                    AKP F+ P P
Sbjct: 264 ---------AKPSFS-PAP 272


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