BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010830
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containi...   124   2e-26
ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containi...   124   2e-26
emb|CBI38482.3| unnamed protein product [Vitis vinifera]              124   2e-26
emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]   124   2e-26
ref|XP_002510967.1| pentatricopeptide repeat-containing protein,...   119   1e-24

>ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  124 bits (312), Expect = 2e-26
 Identities = 59/88 (67%), Positives = 70/88 (79%)
 Frame = +1

Query: 1   IVTYNSLINGLCKMERRREAMNLLDKLQVEGIVPDTITYNTLISWHCRAGMFGEANLLLY 180
           IVTYNSLINGLCK  R +EA+NL DKLQVEGI PD ITYNTLISWHC+ GMF +A+LLL 
Sbjct: 259 IVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLS 318

Query: 181 RAVDNGVVPNVRTWEILINNCIRHCVEE 264
           R VD+G +PN  TW IL++N I+   +E
Sbjct: 319 RGVDSGFIPNEVTWYILVSNFIKEGDQE 346


>ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  124 bits (312), Expect = 2e-26
 Identities = 59/88 (67%), Positives = 70/88 (79%)
 Frame = +1

Query: 1   IVTYNSLINGLCKMERRREAMNLLDKLQVEGIVPDTITYNTLISWHCRAGMFGEANLLLY 180
           IVTYNSLINGLCK  R +EA+NL DKLQVEGI PD ITYNTLISWHC+ GMF +A+LLL 
Sbjct: 652 IVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLS 711

Query: 181 RAVDNGVVPNVRTWEILINNCIRHCVEE 264
           R VD+G +PN  TW IL++N I+   +E
Sbjct: 712 RGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 31/80 (38%), Positives = 45/80 (56%)
 Frame = +1

Query: 7   TYNSLINGLCKMERRREAMNLLDKLQVEGIVPDTITYNTLISWHCRAGMFGEANLLLYRA 186
           T+N  I+GLCKM R  EA  L+D++ + G  P++ TY  L+   CR G   EA +LL + 
Sbjct: 307 TFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV 366

Query: 187 VDNGVVPNVRTWEILINNCI 246
            +    PNV  +  LIN  +
Sbjct: 367 PN----PNVVLFNTLINGYV 382


>emb|CBI38482.3| unnamed protein product [Vitis vinifera]
          Length = 368

 Score =  124 bits (312), Expect = 2e-26
 Identities = 59/88 (67%), Positives = 70/88 (79%)
 Frame = +1

Query: 1   IVTYNSLINGLCKMERRREAMNLLDKLQVEGIVPDTITYNTLISWHCRAGMFGEANLLLY 180
           IVTYNSLINGLCK  R +EA+NL DKLQVEGI PD ITYNTLISWHC+ GMF +A+LLL 
Sbjct: 280 IVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLS 339

Query: 181 RAVDNGVVPNVRTWEILINNCIRHCVEE 264
           R VD+G +PN  TW IL++N I+   +E
Sbjct: 340 RGVDSGFIPNEVTWYILVSNFIKEGDQE 367


>emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  124 bits (312), Expect = 2e-26
 Identities = 59/88 (67%), Positives = 70/88 (79%)
 Frame = +1

Query: 1   IVTYNSLINGLCKMERRREAMNLLDKLQVEGIVPDTITYNTLISWHCRAGMFGEANLLLY 180
           IVTYNSLINGLCK  R +EA+NL DKLQVEGI PD ITYNTLISWHC+ GMF +A+LLL 
Sbjct: 634 IVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLS 693

Query: 181 RAVDNGVVPNVRTWEILINNCIRHCVEE 264
           R VD+G +PN  TW IL++N I+   +E
Sbjct: 694 RGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 31/80 (38%), Positives = 45/80 (56%)
 Frame = +1

Query: 7   TYNSLINGLCKMERRREAMNLLDKLQVEGIVPDTITYNTLISWHCRAGMFGEANLLLYRA 186
           T+N  I+GLCKM R  EA  L+D++ + G  P++ TY  L+   CR G   EA +LL + 
Sbjct: 289 TFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV 348

Query: 187 VDNGVVPNVRTWEILINNCI 246
            +    PNV  +  LIN  +
Sbjct: 349 PN----PNVVLFNTLINGYV 364


>ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550082|gb|EEF51569.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 774

 Score =  119 bits (298), Expect = 1e-24
 Identities = 57/88 (64%), Positives = 66/88 (75%)
 Frame = +1

Query: 1   IVTYNSLINGLCKMERRREAMNLLDKLQVEGIVPDTITYNTLISWHCRAGMFGEANLLLY 180
           +VTYNSLINGLCKM   REA NL +KLQ EGI PD ITYNTLI WHCRAGMF +A LLL 
Sbjct: 625 VVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLL 684

Query: 181 RAVDNGVVPNVRTWEILINNCIRHCVEE 264
           R V+N  +PN  TW IL++N I+   +E
Sbjct: 685 RGVENAFIPNDVTWYILVSNFIKEIGKE 712