BLASTX nr result
ID: Coptis21_contig00010826
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00010826
(1145 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2... 191 3e-46
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 190 7e-46
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 190 7e-46
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ... 184 5e-44
gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo] 171 4e-40
>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
predicted protein [Populus trichocarpa]
Length = 393
Score = 191 bits (485), Expect = 3e-46
Identities = 129/344 (37%), Positives = 189/344 (54%), Gaps = 10/344 (2%)
Frame = -3
Query: 1128 FNLFMANGEVHNVKLPKAEHGLWR-GSSKGWLVQLDDSNSINLINPVTKTRLQLPPLSTF 952
FNL + + H++ LP+A H GSS GWL+ LDDS SI +INP+T+ ++ LP +S+F
Sbjct: 70 FNL--STYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLTRRKIHLPAISSF 127
Query: 951 PDVLEYNPERIGMEYSVRYVRLRKDTNKFFSLAKMKNFFIEKLVLSSSPTEKN---CLAM 781
P+V+ ++ +G EY + + ++T SL +M++ FI+K+V+SSSP EK +AM
Sbjct: 128 PNVVSFDYANVGREYLLVNPQGERNT---ASLRQMRDGFIKKVVMSSSPLEKKGDFFVAM 184
Query: 780 AIFRDCNKLACCRLGDEGWKNVEGGLRRFQDIIYFNGKFYALCIKGRLFVVSNAEVEASS 601
AI LA C+ GDE W VE +D+IYFNG FYA+ G++ V +V +S
Sbjct: 185 AILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVV---CDVNGNS 241
Query: 600 PMPTFVIGPPDGFSCSSGKVYLVESSGELMMV----DRGIELGSINKNTLKFSIFKLNVY 433
P +F+ P YLV S L++V D +E T +F +FKL++
Sbjct: 242 PKVSFIETPR---QIGGDMQYLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDL- 297
Query: 432 TNSFPTWSKVTSLGDRMLFLGQGESFSFWCRDLPGPWKGNHIYFTDDHVLLGNPKYQKAA 253
+ P W +VTSLGD MLF+G+ S + L G G+ IY+TDD+ Y
Sbjct: 298 --NGPRWERVTSLGDMMLFIGENSSLALSASGLSG-CMGDCIYYTDDY---SANNYDGHI 351
Query: 252 GS-DYGVFNLEDECFQTLPLPLPAEYKGRRTRI-WPPPIWILPN 127
G D G+F L D + PLP + +R+ WPPP+WI PN
Sbjct: 352 GEHDLGIFKLSDGSIE----PLPCYPRNSYSRLQWPPPLWISPN 391
>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
Length = 389
Score = 190 bits (482), Expect = 7e-46
Identities = 130/341 (38%), Positives = 184/341 (53%), Gaps = 17/341 (4%)
Frame = -3
Query: 1098 HNVKLPKAEHGLWR-GSSKGWLVQLDDSNSINLINPVTKTRLQLPPLSTFPDVLEYNPER 922
H ++LP+A H R GSS GWL+ LD++ I L+NP+T++++ LPPLSTFP+V+ +N
Sbjct: 76 HFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFNFAD 135
Query: 921 IGMEYSVR------YVRLRKDTNKFFSLAKMKNFFIEKLVLSSSPTE-KNCLAMAIFRDC 763
+G EY++R Y R SL KM++ FI+K +LSSSP + +A+ I
Sbjct: 136 VGREYALRTSSGDVYTR---------SLKKMRDSFIKKTILSSSPANGSDFIAVVILNQT 186
Query: 762 NKLACCRLGDEGWKNVEGGLRRFQDIIYFNGKFYALCIKGRLFVVSNAEVEASSPMPTFV 583
LA CR D+ W +E +D+I+ G FYA+ G + V +V SSP + +
Sbjct: 187 GDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAV---CDVSGSSPRVS-I 242
Query: 582 IGPPDGFSCSSGKVYLVESSGELMMVDRGIEL--------GSINKNTLKFSIFKLNVYTN 427
I P F YLVES EL++V R ++L S+ T +F + +L++
Sbjct: 243 IEMPQQF--GGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDL--- 297
Query: 426 SFPTWSKVTSLGDRMLFLGQGESFSFWCRDLPGPWKGNHIYFTDDHVLLGNPKYQKAAG- 250
P W V+SLGDR LFLG+ S S D PG KGN IY+TDD+ Y G
Sbjct: 298 KAPRWEVVSSLGDRALFLGENLSLSLSSVDFPG-CKGNCIYYTDDY---SEDNYDGIGGE 353
Query: 249 SDYGVFNLEDECFQTLPLPLPAEYKGRRTRIWPPPIWILPN 127
D G+FNLED + PLP + R WPPP+W+ PN
Sbjct: 354 QDLGIFNLEDGSIE----PLPCSHFRIR---WPPPLWVTPN 387
>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
Length = 389
Score = 190 bits (482), Expect = 7e-46
Identities = 130/341 (38%), Positives = 184/341 (53%), Gaps = 17/341 (4%)
Frame = -3
Query: 1098 HNVKLPKAEHGLWR-GSSKGWLVQLDDSNSINLINPVTKTRLQLPPLSTFPDVLEYNPER 922
H ++LP+A H R GSS GWL+ LD++ I L+NP+T++++ LPPLSTFP+V+ +N
Sbjct: 76 HFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFNFAD 135
Query: 921 IGMEYSVR------YVRLRKDTNKFFSLAKMKNFFIEKLVLSSSPTE-KNCLAMAIFRDC 763
+G EY++R Y R SL KM++ FI+K +LSSSP + +A+ I
Sbjct: 136 VGREYALRTSSGDVYTR---------SLKKMRDSFIKKTILSSSPANGSDFIAVVILNQT 186
Query: 762 NKLACCRLGDEGWKNVEGGLRRFQDIIYFNGKFYALCIKGRLFVVSNAEVEASSPMPTFV 583
LA CR D+ W +E +D+I+ G FYA+ G + V +V SSP + +
Sbjct: 187 GDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAV---CDVSGSSPRVS-I 242
Query: 582 IGPPDGFSCSSGKVYLVESSGELMMVDRGIEL--------GSINKNTLKFSIFKLNVYTN 427
I P F YLVES EL++V R ++L S+ T +F + +L+ +
Sbjct: 243 IEMPQQF--GGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLD---S 297
Query: 426 SFPTWSKVTSLGDRMLFLGQGESFSFWCRDLPGPWKGNHIYFTDDHVLLGNPKYQKAAG- 250
P W V+SLGDR LFLG+ S S D PG KGN IY+TDD+ Y G
Sbjct: 298 KAPRWEVVSSLGDRALFLGENLSLSLSSVDFPG-CKGNCIYYTDDY---SEDNYDGIGGE 353
Query: 249 SDYGVFNLEDECFQTLPLPLPAEYKGRRTRIWPPPIWILPN 127
D G+FNLED + PLP + R WPPP+W+ PN
Sbjct: 354 QDLGIFNLEDGSIE----PLPCSHFRIR---WPPPLWVTPN 387
>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 398
Score = 184 bits (466), Expect = 5e-44
Identities = 119/343 (34%), Positives = 187/343 (54%), Gaps = 13/343 (3%)
Frame = -3
Query: 1116 MANGEVHNVKLPKAEHGLWR-GSSKGWLVQLDDSNSINLINPVTKTRLQLPPLSTFPDVL 940
++ + H + LP+ + GSS GWL+ LDD+ +I LINP+T+ +L LPPLS+FP+V+
Sbjct: 73 LSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAKLSLPPLSSFPNVI 132
Query: 939 EYNPERIGMEYSVRYVRLRKDTNKFFSLAKMKNFFIEKLVLSSSP-TEKNCLAMAIFRDC 763
+N IG EY++R + + T SL +M++ FI K+VLSSSP + N + +AI
Sbjct: 133 SFNYSDIGREYALRNLLGERVT---VSLRQMRDSFIRKVVLSSSPLKDNNFVVIAILNQT 189
Query: 762 NKLACCRLGDEGWKNVEGGLRRFQDIIYFNGKFYALCIKGRLFVVSNAEVEASSPMPTFV 583
+ LA CR GD+ W VE +D+I+ NG FYA+ G++ + ++ + SP +F+
Sbjct: 190 DDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVI---CDISSDSPRVSFM 246
Query: 582 IGPPDGFSCSSGKVYLVESSGELMMVDRGIEL----------GSINKNTLKFSIFKLNVY 433
P YLV S EL++V R ++L + T++F +F+L+
Sbjct: 247 ETPR---QAGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDW- 302
Query: 432 TNSFPTWSKVTSLGDRMLFLGQGESFSFWCRDLPGPWKGNHIYFTDDHVLLGNPKYQKAA 253
+ P W ++++LGD+ LF+G+ S S D G GN IY+TDD++ + Y
Sbjct: 303 --NGPQWLRMSTLGDKALFIGENSSLSLSATDFSG-CMGNCIYYTDDYL---DANYDGHF 356
Query: 252 GS-DYGVFNLEDECFQTLPLPLPAEYKGRRTRIWPPPIWILPN 127
G D G+F L DE + LP P + W PP+W+ PN
Sbjct: 357 GDHDLGIFKLCDETIEPLPC-YPRNFTSPLQ--WSPPLWVSPN 396
>gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
Length = 392
Score = 171 bits (432), Expect = 4e-40
Identities = 123/351 (35%), Positives = 182/351 (51%), Gaps = 12/351 (3%)
Frame = -3
Query: 1143 CDCDAFNLFMANGEVHNVKLPKAE-HGLWRGSSKGWLVQLDDSNSINLINPVTKTRLQLP 967
C C FN ++ ++H + LP+A GSS GWL LD++ SI L+NP+T+ + +LP
Sbjct: 61 CRCGLFNF--SDNKIHFLYLPEASLRKRPCGSSHGWLTILDETPSILLLNPLTRAKFRLP 118
Query: 966 PLSTFPDVLEYNPERIGMEYSVRYVRLRKDTNKFFSLAKMKNFFIEKLVLSSSPTEKN-C 790
PLSTFP+V+ ++ R+G EY +R T +L +M++ F++K+VLSSSP+ +N
Sbjct: 119 PLSTFPNVVSFDYSRVGREYLIRTPTGHIYTR---NLRQMRDSFVKKIVLSSSPSNQNDF 175
Query: 789 LAMAIFRDCNKLACCRLGDEGWKNVEGGLRRFQDIIYFNGKFYALCIKGRLFVVSNAEVE 610
LA+AI LA CR G W V+ +D+IY +G FYA+ G VVS ++
Sbjct: 176 LAVAILNHSGDLAFCRSGGGSWTFVDDAPSDCEDVIYTDGVFYAVDKYG---VVSLMDLR 232
Query: 609 ASSPMPTFVIGPPDGFSCSSGKVYLVESSGELMMVDRGI---------ELGSINKNTLKF 457
S + V + YLV EL++V R + EL S+ T++F
Sbjct: 233 GSRSQVSLVATER---QLAGDIQYLVRLGQELLLVSRYLDIVNDGMDDELISVMYRTVRF 289
Query: 456 SIFKLNVYTNSFPTWSKVTSLGDRMLFLGQGESFSFWCRDLPGPWKGNHIYFTDDHVLLG 277
+F++ P W KV +L + LF+G S +F D G GN IY+TDD+
Sbjct: 290 EVFRMEW---EGPRWEKVENLNEMALFVGGNSSMAFSAADF-GEISGNCIYYTDDY---S 342
Query: 276 NPKYQ-KAAGSDYGVFNLEDECFQTLPLPLPAEYKGRRTRIWPPPIWILPN 127
+ YQ + D G+F L DE F+ LP + RR PPIW+ PN
Sbjct: 343 DSDYQGQGEEPDMGIFRLCDESFEPLPYYSGGSHSRRRLL---PPIWVTPN 390