BLASTX nr result

ID: Coptis21_contig00010796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010796
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263732.1| PREDICTED: uncharacterized protein LOC100249...   288   1e-75
ref|XP_002263161.1| PREDICTED: uncharacterized protein LOC100244...   284   3e-74
ref|XP_002530555.1| conserved hypothetical protein [Ricinus comm...   278   2e-72
ref|XP_003553153.1| PREDICTED: protein NDR1-like [Glycine max]        271   2e-70
ref|XP_002321933.1| predicted protein [Populus trichocarpa] gi|2...   270   4e-70

>ref|XP_002263732.1| PREDICTED: uncharacterized protein LOC100249528 [Vitis vinifera]
           gi|297737207|emb|CBI26408.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  288 bits (738), Expect = 1e-75
 Identities = 146/250 (58%), Positives = 184/250 (73%), Gaps = 3/250 (1%)
 Frame = +1

Query: 169 MADQQKIHPV-DVEAPPTAPLMPNGALKSEKGDPTEQYP--PIRRTIPVIHSRPPRKRGC 339
           MAD QKIHPV D EAPPT PL+P G+ +SEKGDP +  P  P++RTIPVIHS+PP KR C
Sbjct: 1   MADHQKIHPVVDPEAPPTEPLVPRGSFRSEKGDPFQHPPDPPLQRTIPVIHSKPP-KRSC 59

Query: 340 CCRFICWTISLFLVLVVLIAATLGILYLVFQPKLPKYSVDRLRISDFRVNPDMSLYSRFT 519
           CC+ +CWTISL ++L+V++ A  G+LYLVFQPKLPKYSVD LRI+DF++N DM+LY++F 
Sbjct: 60  CCKCMCWTISLLVLLLVIVGAIAGVLYLVFQPKLPKYSVDSLRITDFQLNYDMTLYAKFD 119

Query: 520 VEITARNPNKKIGIYYESGSDISVYYSNIKLSGGALPKFYQGHQNTTVLDVDLSGQNKNA 699
           ++I A NPNKKIGIYYE G  +SV+Y+N KL  G+LPKFYQGHQNTTVL+V L+GQ +  
Sbjct: 120 MKIKANNPNKKIGIYYEKGGKLSVWYTNTKLCHGSLPKFYQGHQNTTVLNVVLTGQTQYG 179

Query: 700 NGLMTALXXXXXXXGNIPLNLKANVPXXXXXXXXXXXXXXXXXRCNLVVDNLTANNMIRI 879
           + LMTAL         IPL+LK +VP                  C LVVD+L+ANN+I I
Sbjct: 180 STLMTALQEQQQKR-RIPLDLKVDVPVAIKLGKLKLKKVRFLVECLLVVDSLSANNLISI 238

Query: 880 RTSSCKFRLR 909
           R S C+FRL+
Sbjct: 239 RASDCRFRLK 248


>ref|XP_002263161.1| PREDICTED: uncharacterized protein LOC100244374 [Vitis vinifera]
           gi|296083806|emb|CBI24023.3| unnamed protein product
           [Vitis vinifera]
          Length = 251

 Score =  284 bits (726), Expect = 3e-74
 Identities = 146/251 (58%), Positives = 178/251 (70%), Gaps = 4/251 (1%)
 Frame = +1

Query: 169 MADQQKIHPV-DVEAP--PTAPLMPNGALKSEKGDPTEQYPPIRRTIPVIHSRPPRK-RG 336
           MAD Q+IHP  D EAP  PTAPL+P GA KS++ DPTEQYPP +RTIPV+HS+PP+K R 
Sbjct: 1   MADPQRIHPAQDPEAPHTPTAPLVPRGASKSDRSDPTEQYPPFQRTIPVMHSKPPKKKRS 60

Query: 337 CCCRFICWTISLFLVLVVLIAATLGILYLVFQPKLPKYSVDRLRISDFRVNPDMSLYSRF 516
           C C+  CWTISL L+L+V+IA  + IL+LVF+PKLPKYS+D LRI+   +  D SL + F
Sbjct: 61  CLCKCFCWTISLLLLLIVIIAIVVAILFLVFKPKLPKYSIDGLRITQLSLGSDDSLSATF 120

Query: 517 TVEITARNPNKKIGIYYESGSDISVYYSNIKLSGGALPKFYQGHQNTTVLDVDLSGQNKN 696
            V ITARNPN KIGIYYE GS I+V+Y+  +L  G+LPKFYQGHQNTTVL V+L+GQ +N
Sbjct: 121 DVNITARNPNTKIGIYYEGGSSITVFYTGTQLCEGSLPKFYQGHQNTTVLTVELTGQTQN 180

Query: 697 ANGLMTALXXXXXXXGNIPLNLKANVPXXXXXXXXXXXXXXXXXRCNLVVDNLTANNMIR 876
           A GL+T L       G+IPL LK   P                  CNLVVDNL ANN I 
Sbjct: 181 ATGLLTTL-QEQRETGSIPLTLKVKQPVRIKLGKLKLMKMKFRATCNLVVDNLDANNTIS 239

Query: 877 IRTSSCKFRLR 909
           I++SSCKFRL+
Sbjct: 240 IKSSSCKFRLK 250


>ref|XP_002530555.1| conserved hypothetical protein [Ricinus communis]
           gi|223529893|gb|EEF31823.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 253

 Score =  278 bits (710), Expect = 2e-72
 Identities = 139/251 (55%), Positives = 176/251 (70%), Gaps = 5/251 (1%)
 Frame = +1

Query: 169 MADQQKIHPV--DVEAP--PTAPLMPNGALKSEKGDPT-EQYPPIRRTIPVIHSRPPRKR 333
           MADQQ+IHPV  DVEAP  PT PLMP  + KS++GDP  +QYPP +RT PV HS+PP+KR
Sbjct: 1   MADQQRIHPVTHDVEAPQTPTVPLMPRNSSKSDQGDPAAQQYPPFQRTFPVKHSKPPKKR 60

Query: 334 GCCCRFICWTISLFLVLVVLIAATLGILYLVFQPKLPKYSVDRLRISDFRVNPDMSLYSR 513
            CCC+ +CWT+SL L+L+V+I   +GILYLVF+PKLP +S+DRL+I+ F ++ D SL + 
Sbjct: 61  SCCCKCLCWTLSLLLILIVVIGIIIGILYLVFRPKLPDFSIDRLQITQFNLSSDSSLSAA 120

Query: 514 FTVEITARNPNKKIGIYYESGSDISVYYSNIKLSGGALPKFYQGHQNTTVLDVDLSGQNK 693
           F V ITA NPN+KIGIYYE GS I V+YS  KL  G+LPKFYQGH+NTTVL+V L+G  +
Sbjct: 121 FDVTITATNPNEKIGIYYEGGSHIGVWYSGTKLCEGSLPKFYQGHENTTVLNVPLTGHTQ 180

Query: 694 NANGLMTALXXXXXXXGNIPLNLKANVPXXXXXXXXXXXXXXXXXRCNLVVDNLTANNMI 873
           +A GL+T+L       G IPLNL+   P                 +C L VD+L+ NN I
Sbjct: 181 DAAGLLTSLQQQQQATGIIPLNLRVKQPVRIKLGKLKLFEIKFLVKCKLDVDSLSTNNDI 240

Query: 874 RIRTSSCKFRL 906
            IR SSCKF L
Sbjct: 241 SIRNSSCKFSL 251


>ref|XP_003553153.1| PREDICTED: protein NDR1-like [Glycine max]
          Length = 244

 Score =  271 bits (694), Expect = 2e-70
 Identities = 140/248 (56%), Positives = 174/248 (70%), Gaps = 2/248 (0%)
 Frame = +1

Query: 172 ADQQKIHPV-DVEAPPTAPLMPNGALKSEKGDPTEQYPPIRRTIPVIHSRPP-RKRGCCC 345
           ADQQ+IHPV DVEAP   PL+P    KS+KG P       +RT PV+HS+PP R+R CCC
Sbjct: 4   ADQQRIHPVHDVEAPHR-PLVPENYAKSDKGIP-------QRTFPVMHSKPPKRRRSCCC 55

Query: 346 RFICWTISLFLVLVVLIAATLGILYLVFQPKLPKYSVDRLRISDFRVNPDMSLYSRFTVE 525
           RF+CWT+S+ L+L++ IA T+GILYLVF+PKLPKYSVD+LRIS F V+ + +LY+ F V 
Sbjct: 56  RFMCWTLSILLILIIAIAITIGILYLVFRPKLPKYSVDQLRISQFNVSDNNTLYATFNVA 115

Query: 526 ITARNPNKKIGIYYESGSDISVYYSNIKLSGGALPKFYQGHQNTTVLDVDLSGQNKNANG 705
           ITARNPNKKIGIYYE GS IS +Y + KL  G+LPKFYQGH+NTTVLD+ L+GQ  +A+G
Sbjct: 116 ITARNPNKKIGIYYEGGSHISAWYMDTKLCEGSLPKFYQGHRNTTVLDLPLTGQAPDASG 175

Query: 706 LMTALXXXXXXXGNIPLNLKANVPXXXXXXXXXXXXXXXXXRCNLVVDNLTANNMIRIRT 885
           L+  +        N+PLNLK N P                 RC L VDN  A+N IRI +
Sbjct: 176 LVNRIQEQLQQTNNVPLNLKVNQPVRVKFGKLKLFKVKFRVRCRLEVDNFGASNDIRISS 235

Query: 886 SSCKFRLR 909
           SSCKF+LR
Sbjct: 236 SSCKFKLR 243


>ref|XP_002321933.1| predicted protein [Populus trichocarpa] gi|222868929|gb|EEF06060.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  270 bits (691), Expect = 4e-70
 Identities = 141/270 (52%), Positives = 175/270 (64%), Gaps = 23/270 (8%)
 Frame = +1

Query: 169 MADQQKIHPV------------DVEAP--PTAPLMPNGALKSEKGDPT--------EQYP 282
           MA+ QKIHP+            D EAP  PT PL+P G+ KS+KGD          + YP
Sbjct: 3   MANHQKIHPLNMSSGAHDDQQLDAEAPQAPTVPLVPRGSSKSDKGDAAAHLLPRDNQHYP 62

Query: 283 PIRRTIPVIHSRPPRKRG-CCCRFICWTISLFLVLVVLIAATLGILYLVFQPKLPKYSVD 459
           P +RTIPVIH++PP++R  CCCRF+CWT+ L  +L++LI    GILYLVFQPKLPKYS+D
Sbjct: 63  PFQRTIPVIHTKPPKERSSCCCRFLCWTLFLLFLLILLIGVVAGILYLVFQPKLPKYSID 122

Query: 460 RLRISDFRVNPDMSLYSRFTVEITARNPNKKIGIYYESGSDISVYYSNIKLSGGALPKFY 639
           RL+I+ F +  + SL + F V ITARNPNKK+G+YYE GS ISV+Y+   L  G+LP+FY
Sbjct: 123 RLQITQFNLTNNSSLTATFDVTITARNPNKKVGVYYEGGSHISVWYTGTNLCQGSLPRFY 182

Query: 640 QGHQNTTVLDVDLSGQNKNANGLMTALXXXXXXXGNIPLNLKANVPXXXXXXXXXXXXXX 819
           QGH+NTTVL+V LSGQ  +AN L+T+L       G IPLNL+   P              
Sbjct: 183 QGHRNTTVLNVVLSGQTNDANTLITSLQQQQQQTGIIPLNLRVIQPVRIKFGKLKIMKVK 242

Query: 820 XXXRCNLVVDNLTANNMIRIRTSSCKFRLR 909
              RC L VDNL ANN I IR SSCKFR R
Sbjct: 243 FRVRCRLDVDNLAANNAINIRNSSCKFRFR 272


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