BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010792
         (1052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein lig...    98   9e-23
gb|ACU23737.1| unknown [Glycine max]                                   98   9e-23
emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]    97   2e-22
ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein lig...    97   2e-22
ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein lig...    95   1e-20

>ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 485

 Score = 98.2 bits (243), Expect(2) = 9e-23
 Identities = 49/69 (71%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
 Frame = +2

Query: 398 DDTCTRAIQSFKRKNIHVVRVFAGDEHVVALDSNGYVYTWGK---GALGPGDEIDKTTPA 568
           D+   RAIQ F+RK IH+VRV AGDEH VALDSNGYVYTWGK   GALG GDEI+KTTP 
Sbjct: 305 DELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPE 364

Query: 569 LLNSIKGAL 595
           LL S+K  L
Sbjct: 365 LLTSLKNQL 373



 Score = 35.8 bits (81), Expect(2) = 9e-23
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +3

Query: 597 LVVQVCARKRKTFVLMDT 650
           LVVQVCARKRKTFVL+D+
Sbjct: 373 LVVQVCARKRKTFVLVDS 390


>gb|ACU23737.1| unknown [Glycine max]
          Length = 485

 Score = 98.2 bits (243), Expect(2) = 9e-23
 Identities = 49/69 (71%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
 Frame = +2

Query: 398 DDTCTRAIQSFKRKNIHVVRVFAGDEHVVALDSNGYVYTWGK---GALGPGDEIDKTTPA 568
           D+   RAIQ F+RK IH+VRV AGDEH VALDSNGYVYTWGK   GALG GDEI+KTTP 
Sbjct: 305 DELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPE 364

Query: 569 LLNSIKGAL 595
           LL S+K  L
Sbjct: 365 LLTSLKNQL 373



 Score = 35.8 bits (81), Expect(2) = 9e-23
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +3

Query: 597 LVVQVCARKRKTFVLMDT 650
           LVVQVCARKRKTFVL+D+
Sbjct: 373 LVVQVCARKRKTFVLVDS 390


>emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score = 97.4 bits (241), Expect(2) = 2e-22
 Identities = 48/64 (75%), Positives = 55/64 (85%), Gaps = 3/64 (4%)
 Frame = +2

Query: 413 RAIQSFKRKNIHVVRVFAGDEHVVALDSNGYVYTWGK---GALGPGDEIDKTTPALLNSI 583
           RAIQSF+RK IHVVR+ AGDEHVVALDS+G+VYTWGK   GALG GDEIDKTTP +L+S+
Sbjct: 313 RAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSL 372

Query: 584 KGAL 595
           K  L
Sbjct: 373 KSHL 376



 Score = 35.8 bits (81), Expect(2) = 2e-22
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +3

Query: 597 LVVQVCARKRKTFVLMDT 650
           L VQVCARKRKTFVL+DT
Sbjct: 376 LAVQVCARKRKTFVLVDT 393


>ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera] gi|302143037|emb|CBI20332.3| unnamed protein
           product [Vitis vinifera]
          Length = 492

 Score = 97.4 bits (241), Expect(2) = 2e-22
 Identities = 48/64 (75%), Positives = 55/64 (85%), Gaps = 3/64 (4%)
 Frame = +2

Query: 413 RAIQSFKRKNIHVVRVFAGDEHVVALDSNGYVYTWGK---GALGPGDEIDKTTPALLNSI 583
           RAIQSF+RK IHVVR+ AGDEHVVALDS+G+VYTWGK   GALG GDEIDKTTP +L+S+
Sbjct: 313 RAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSL 372

Query: 584 KGAL 595
           K  L
Sbjct: 373 KSHL 376



 Score = 35.8 bits (81), Expect(2) = 2e-22
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +3

Query: 597 LVVQVCARKRKTFVLMDT 650
           L VQVCARKRKTFVL+DT
Sbjct: 376 LAVQVCARKRKTFVLVDT 393


>ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 485

 Score = 94.7 bits (234), Expect(2) = 1e-20
 Identities = 47/69 (68%), Positives = 53/69 (76%), Gaps = 3/69 (4%)
 Frame = +2

Query: 398 DDTCTRAIQSFKRKNIHVVRVFAGDEHVVALDSNGYVYTWGK---GALGPGDEIDKTTPA 568
           D+   R IQ F+RK IH+VRV AGDEH VALDSNG+VYTWGK   GALG GDEI+KTTP 
Sbjct: 305 DELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPE 364

Query: 569 LLNSIKGAL 595
           LL S+K  L
Sbjct: 365 LLTSLKNQL 373



 Score = 32.3 bits (72), Expect(2) = 1e-20
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +3

Query: 597 LVVQVCARKRKTFVLMDT 650
           L VQVCARKRKTFVL+++
Sbjct: 373 LAVQVCARKRKTFVLVNS 390