BLASTX nr result
ID: Coptis21_contig00010785
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00010785
(1994 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271102.1| PREDICTED: GRAM domain-containing protein 1A... 296 e-150
ref|XP_002511583.1| conserved hypothetical protein [Ricinus comm... 267 e-129
ref|XP_004134278.1| PREDICTED: GRAM domain-containing protein 1A... 256 e-125
ref|NP_171714.2| GRAM domain family protein [Arabidopsis thalian... 253 e-118
ref|XP_002892024.1| hypothetical protein ARALYDRAFT_470058 [Arab... 250 e-117
>ref|XP_002271102.1| PREDICTED: GRAM domain-containing protein 1A [Vitis vinifera]
gi|297734616|emb|CBI16667.3| unnamed protein product
[Vitis vinifera]
Length = 639
Score = 296 bits (759), Expect(2) = e-150
Identities = 158/315 (50%), Positives = 200/315 (63%), Gaps = 5/315 (1%)
Frame = +1
Query: 1063 VQVEDFFNLFFSDKAVTFVDTFHRICGDKDFRCTSWSAHTQSGHARELSFQHPIKFYFGA 1242
++VE+FF FFSD AV F+++FH+ CGDK+FRCTSWS H + GHAR+ SFQHPIK YFGA
Sbjct: 291 IKVEEFFTFFFSDDAVDFIESFHKRCGDKEFRCTSWSPHDKFGHARDKSFQHPIKLYFGA 350
Query: 1243 KFGHCREAQRFRVYRNSHMVIETSQEIGDVPYADYFLVEGRWVVQKDVIERNKSCILRVY 1422
KFG CREAQ+FRVY+NSH++IETSQE+ DVPY DYF VEG W V+ D E N CILRVY
Sbjct: 351 KFGSCREAQKFRVYKNSHLIIETSQEVNDVPYGDYFTVEGLWNVESDGDESNGGCILRVY 410
Query: 1423 VNVAFSKKTIWKGKIEQSTIEECREAYAAWLDNAHEFLKQNSLEKIDGETSAPNIIPIDA 1602
VNVAFSKKT+WKGKI QST+EECREAYA W+ AHE LKQ +LEK + S A
Sbjct: 411 VNVAFSKKTMWKGKIVQSTVEECREAYAIWISLAHELLKQKNLEKQEEIRSTRTAENSRA 470
Query: 1603 QFEERERVMSPLQRLPVTSDVHQIPSVASDTKHVNPAFENSLHGGIXXXXXXXXXXXXXX 1782
E + + +R ++ +IP + D++ VN HG +
Sbjct: 471 HLERQVEMEETSERSHEAANSSKIPHMC-DSRDVN-------HGNLLQGNTVTSFSSLLS 522
Query: 1783 XXXXMY--LKSQNHIP-XXXXXXXXXXXXMQLSIIVLLTRPPQVHLMSHMDHMNGIGTSR 1953
+ LK+Q H+ MQLSI+VLL RP +V ++S D+MNG+ S
Sbjct: 523 EWMVKFSTLKNQRHLQLLFLITFVLILLLMQLSIVVLLARPQRVQVISQADYMNGMDISG 582
Query: 1954 NG--MAEAGAWLEKR 1992
+G +EA AWLEKR
Sbjct: 583 SGERSSEAVAWLEKR 597
Score = 262 bits (670), Expect(2) = e-150
Identities = 133/233 (57%), Positives = 175/233 (75%)
Frame = +2
Query: 320 AYLKSEEYRLLFRLPPDEMLVQDFNCAFQESILLQGHMYLFVRHICFYSNIFGFETKKTI 499
A LKSEEYR LFRLP +E+LVQDFNCA QESIL QGHMYLFVR+ICFYSNIFGFETK+ I
Sbjct: 59 AALKSEEYRQLFRLPLEEVLVQDFNCALQESILFQGHMYLFVRYICFYSNIFGFETKRII 118
Query: 500 PFNEVTCVRKAKTAGIFPNAIEIVVGGKRNFFASFLSRDEAYRLIVDGWSQYVNGTEVLI 679
PF EVTCV++AKTAGIFPNAIEI+ G K+ FFASFLSRDEA++LI DGW ++ +G + +
Sbjct: 119 PFQEVTCVKRAKTAGIFPNAIEILAGEKKYFFASFLSRDEAFKLINDGWLRHSDGVKAIS 178
Query: 680 DHRDYKSEILSESSVRVIHEKSVGSEQQTNELNPFDRNKDGDLSGNCKLLSNGEDDISVP 859
+ ++ S+ ++ + V E+ SE+ NEL+ DRNKD LS + KL S+ +DDI VP
Sbjct: 179 EQQESLSDGCLDNGI-VADEEVKSSEEPVNELDSIDRNKDPPLSKDSKLPSDAKDDI-VP 236
Query: 860 SSPLEAEENGEGDAESIDNAEHLSSGKPLVWTMEDASAPEVPDYFTKVAESKF 1018
+P + ++N E + ES+ + SSG L W E++ AP+VP+Y++ VAE+KF
Sbjct: 237 ITPADQQDNVEQNVESVPITDSSSSGNILTWKQENSVAPKVPEYYSNVAEAKF 289
>ref|XP_002511583.1| conserved hypothetical protein [Ricinus communis]
gi|223548763|gb|EEF50252.1| conserved hypothetical
protein [Ricinus communis]
Length = 644
Score = 267 bits (683), Expect(2) = e-129
Identities = 142/313 (45%), Positives = 194/313 (61%), Gaps = 3/313 (0%)
Frame = +1
Query: 1063 VQVEDFFNLFFSDKAVTFVDTFHRICGDKDFRCTSWSAHTQSGHARELSFQHPIKFYFGA 1242
++VE+FFN FFSD A F+++FH+ CGDK+FRC+ W + GH R +SFQHPIK YFGA
Sbjct: 297 IKVEEFFNFFFSDDASNFIESFHQRCGDKEFRCSLWQPQEKLGHTRNVSFQHPIKIYFGA 356
Query: 1243 KFGHCREAQRFRVYRNSHMVIETSQEIGDVPYADYFLVEGRWVVQKDVIERNKSCILRVY 1422
KFG C+E Q+F+VYRNSH+VIETSQEI DVPY DYF VEG W V KD E N+ C+L++Y
Sbjct: 357 KFGSCQEKQKFQVYRNSHLVIETSQEINDVPYGDYFRVEGLWDVVKDADESNEGCLLQIY 416
Query: 1423 VNVAFSKKTIWKGKIEQSTIEECREAYAAWLDNAHEFLKQNSLEKIDGETSAPNIIP-ID 1599
V+VAFSKKT++KGKI QST+EECREAYA W++ AHE LKQ +LE PN+I ++
Sbjct: 417 VDVAFSKKTVFKGKIVQSTLEECREAYATWINMAHELLKQKNLE---SREEGPNVIQNVE 473
Query: 1600 AQFEERERVMSPLQRLPVTSDVHQIPSVASDTKHVNPAFENSLHGGIXXXXXXXXXXXXX 1779
E R + ++ ++D +I + S + VN + +
Sbjct: 474 VHTEVALRSVETSEKSSQSNDRGRIAQM-SGSLDVNERVGDLVQENFTNATAVASLLREY 532
Query: 1780 XXXXXMYLKSQNHIPXXXXXXXXXXXXMQLSIIVLLTRPPQVHLMSHMD-HMNGIGTSRN 1956
+L+SQ+ + MQ+SI+VLL RP V + S + +M G+G+S
Sbjct: 533 ATRFSTFLRSQSQVSLILVVAFVVIFLMQVSILVLLNRPQTVQVASPGEYYMGGMGSSMG 592
Query: 1957 GMA-EAGAWLEKR 1992
+ EA AWLE+R
Sbjct: 593 DRSTEAVAWLERR 605
Score = 224 bits (570), Expect(2) = e-129
Identities = 123/234 (52%), Positives = 155/234 (66%), Gaps = 1/234 (0%)
Frame = +2
Query: 320 AYLKSEEYRLLFRLPPDEMLVQDFNCAFQESILLQGHMYLFVRHICFYSNIFGFETKKTI 499
A L++EEYR LFRLPP+E +VQDFNCAFQESILLQGHMYLF +ICFYSNIFGFETKK I
Sbjct: 64 AALRNEEYRQLFRLPPEEAIVQDFNCAFQESILLQGHMYLFSHYICFYSNIFGFETKKVI 123
Query: 500 PFNEVTCVRKAKTAGIFPNAIEIVVGGKRNFFASFLSRDEAYRLIVDGWSQYVNGTEVLI 679
PF EV+ V++AKTAGIFPNAIEI G ++ FFASFLSRDEA++LI DGW Q VNG +
Sbjct: 124 PFIEVSSVKRAKTAGIFPNAIEIFAGERKYFFASFLSRDEAFKLINDGWLQCVNGARAIT 183
Query: 680 DHRDYKSEILSESSVRVIHEKSVGSEQQTNELNPFDRNKDGDLSGNCKLLSNGEDDIS-V 856
+ ++ S +I EK V S + NEL+ DR+ D LS + L + +I
Sbjct: 184 EEQESMISGSSSLDNGIIIEK-VNSFRGINELDSDDRDNDVSLSNDYMLSAPSAVEIERA 242
Query: 857 PSSPLEAEENGEGDAESIDNAEHLSSGKPLVWTMEDASAPEVPDYFTKVAESKF 1018
P E ++N + D E +D SS +W EDA PE+ +T+V E+KF
Sbjct: 243 PERLTEIKDNVKKDVEPVDYITS-SSSTTSIWNEEDAEPPEIRKSYTRVGETKF 295
>ref|XP_004134278.1| PREDICTED: GRAM domain-containing protein 1A-like [Cucumis sativus]
Length = 648
Score = 256 bits (653), Expect(2) = e-125
Identities = 138/315 (43%), Positives = 183/315 (58%), Gaps = 1/315 (0%)
Frame = +1
Query: 1051 SNTQVQVEDFFNLFFSDKAVTFVDTFHRICGDKDFRCTSWSAHTQSGHARELSFQHPIKF 1230
S + VEDFF+ +FSD AV FV ++H CGDK+ +C+ W GH R++SFQHPIK
Sbjct: 302 SKFPINVEDFFSFYFSDSAVDFVSSYHEKCGDKELKCSLWRHDDMFGHTRDVSFQHPIKI 361
Query: 1231 YFGAKFGHCREAQRFRVYRNSHMVIETSQEIGDVPYADYFLVEGRWVVQKDV-IERNKSC 1407
YFGAKFG C E Q+FRVYR+SH+VIE +QE+ +VPY+DYF VE W V+KDV E N C
Sbjct: 362 YFGAKFGGCLETQKFRVYRDSHLVIEVTQEVSEVPYSDYFRVEAHWEVKKDVDDESNNCC 421
Query: 1408 ILRVYVNVAFSKKTIWKGKIEQSTIEECREAYAAWLDNAHEFLKQNSLEKIDGETSAPNI 1587
ILRVYVNVAFSK+T+WKGKI QST+EECREAY W+ A E LKQ +G + +
Sbjct: 422 ILRVYVNVAFSKRTVWKGKIVQSTLEECREAYGLWIQMAKELLKQKLTGSEEGTRGSASQ 481
Query: 1588 IPIDAQFEERERVMSPLQRLPVTSDVHQIPSVASDTKHVNPAFENSLHGGIXXXXXXXXX 1767
D E+ L+ +D + T V+ +NS+ G
Sbjct: 482 SGEDHHIEKERNNNKSLEMSNEKNDERRSTESQYST-DVDQQAKNSIQG--VNSTSAASW 538
Query: 1768 XXXXXXXXXMYLKSQNHIPXXXXXXXXXXXXMQLSIIVLLTRPPQVHLMSHMDHMNGIGT 1947
+ L+SQN++P MQLSI++LL+RP +H +S D+ G+
Sbjct: 539 LREYTKKLWIVLRSQNYLPLALVITFAVIFLMQLSIVMLLSRPQHIH-VSSPDYGRGLKF 597
Query: 1948 SRNGMAEAGAWLEKR 1992
S ++A AWLEKR
Sbjct: 598 SGGRSSDATAWLEKR 612
Score = 223 bits (567), Expect(2) = e-125
Identities = 118/225 (52%), Positives = 155/225 (68%)
Frame = +2
Query: 344 RLLFRLPPDEMLVQDFNCAFQESILLQGHMYLFVRHICFYSNIFGFETKKTIPFNEVTCV 523
R LFRLP DE+L++DFNCAFQE+IL+QGHMYLFV +ICFYSNIFGFETKK IPF E+T V
Sbjct: 85 RQLFRLPLDEVLIEDFNCAFQENILIQGHMYLFVHYICFYSNIFGFETKKIIPFREITAV 144
Query: 524 RKAKTAGIFPNAIEIVVGGKRNFFASFLSRDEAYRLIVDGWSQYVNGTEVLIDHRDYKSE 703
RKAKTAGIFPNAIEI VG K+ FFASFLSRDEA+ LI DGW Q+ GTE ++ K +
Sbjct: 145 RKAKTAGIFPNAIEICVGEKKYFFASFLSRDEAFNLINDGWLQHAKGTEAIMK----KQK 200
Query: 704 ILSESSVRVIHEKSVGSEQQTNELNPFDRNKDGDLSGNCKLLSNGEDDISVPSSPLEAEE 883
++ESS + I V ++ + + DR+ D + N ++ ++++VP++
Sbjct: 201 SINESSRQEIGILGVEKAKELDPSDSSDRSMDTPIL-NVSVVQANVEEVNVPTTLPPEPI 259
Query: 884 NGEGDAESIDNAEHLSSGKPLVWTMEDASAPEVPDYFTKVAESKF 1018
+AE I + +S + L+W ED AP VPDY+T+VAESKF
Sbjct: 260 VATQEAEPILDIHASTSRETLMWKPEDTDAPNVPDYYTQVAESKF 304
>ref|NP_171714.2| GRAM domain family protein [Arabidopsis thaliana]
gi|332189265|gb|AEE27386.1| GRAM domain family protein
[Arabidopsis thaliana]
Length = 598
Score = 253 bits (646), Expect(2) = e-118
Identities = 120/195 (61%), Positives = 148/195 (75%)
Frame = +1
Query: 1033 FIKTFISNTQVQVEDFFNLFFSDKAVTFVDTFHRICGDKDFRCTSWSAHTQSGHARELSF 1212
F K + + VE+FF LFFSD AV+FV++FH+ CGDK+FRCTSW H + GH R +SF
Sbjct: 273 FTKVAEAKFSIPVEEFFRLFFSDGAVSFVESFHKNCGDKEFRCTSWQPHEKLGHTRNVSF 332
Query: 1213 QHPIKFYFGAKFGHCREAQRFRVYRNSHMVIETSQEIGDVPYADYFLVEGRWVVQKDVIE 1392
QHPIK YFGAKFG C+E+Q+FR+YRNSH+VIETSQEI DVPYADYF VEG W +++D +
Sbjct: 333 QHPIKIYFGAKFGGCQESQKFRMYRNSHLVIETSQEISDVPYADYFTVEGVWDLKRDCRD 392
Query: 1393 RNKSCILRVYVNVAFSKKTIWKGKIEQSTIEECREAYAAWLDNAHEFLKQNSLEKIDGET 1572
+ CIL VYVNVAFSK+T+WKGKI QST+EECREAYA W+ AHE LKQ LE +G
Sbjct: 393 SVEGCILDVYVNVAFSKRTVWKGKIVQSTLEECREAYAHWIRMAHELLKQKKLENQEGNK 452
Query: 1573 SAPNIIPIDAQFEER 1617
+ P+ A+ EER
Sbjct: 453 LIEDGEPLAAR-EER 466
Score = 202 bits (514), Expect(2) = e-118
Identities = 111/234 (47%), Positives = 148/234 (63%), Gaps = 4/234 (1%)
Frame = +2
Query: 329 KSEEYRLLFRLPPDEMLVQDFNCAFQESILLQGHMYLFVRHICFYSNIFGFETKKTIPFN 508
KSEEYR LFRLP DE+LVQDFNCA QESIL+QGHMYLF+ +ICFYSNIFG+ETKK IPF
Sbjct: 68 KSEEYRQLFRLPADEILVQDFNCACQESILMQGHMYLFIHYICFYSNIFGYETKKIIPFA 127
Query: 509 EVTCVRKAKTAGIFPNAIEIVVGGKRNFFASFLSRDEAYRLIVDGWSQYVNGT----EVL 676
E++CV++AKTAGIFPNAIEI+ GGK+ FFASFLSRDEA++LI DGW +Y + E+L
Sbjct: 128 EISCVKRAKTAGIFPNAIEILAGGKKYFFASFLSRDEAFKLIHDGWLEYGSAVKSEGEIL 187
Query: 677 IDHRDYKSEILSESSVRVIHEKSVGSEQQTNELNPFDRNKDGDLSGNCKLLSNGEDDISV 856
+ ++ +++ S NEL+ R++ LS + L ++ +
Sbjct: 188 VTEPQVSDGVV---------KRARSSMDLANELDIPVRDETLHLSSSSSLPVISQNGV-- 236
Query: 857 PSSPLEAEENGEGDAESIDNAEHLSSGKPLVWTMEDASAPEVPDYFTKVAESKF 1018
P + + E D + + + W ED AP++ FTKVAE+KF
Sbjct: 237 --PPSSVQRHAEPDVDVV-------AANTFNWKPEDTDAPKLSSDFTKVAEAKF 281
>ref|XP_002892024.1| hypothetical protein ARALYDRAFT_470058 [Arabidopsis lyrata subsp.
lyrata] gi|297337866|gb|EFH68283.1| hypothetical protein
ARALYDRAFT_470058 [Arabidopsis lyrata subsp. lyrata]
Length = 598
Score = 250 bits (639), Expect(2) = e-117
Identities = 118/195 (60%), Positives = 147/195 (75%)
Frame = +1
Query: 1033 FIKTFISNTQVQVEDFFNLFFSDKAVTFVDTFHRICGDKDFRCTSWSAHTQSGHARELSF 1212
F K + + VE+FF LFFSD AV FV++FH+ CGDK+FRCTSW H + GH R +SF
Sbjct: 273 FTKVAEAKFSIPVEEFFRLFFSDGAVNFVESFHKNCGDKEFRCTSWQPHEKLGHTRNVSF 332
Query: 1213 QHPIKFYFGAKFGHCREAQRFRVYRNSHMVIETSQEIGDVPYADYFLVEGRWVVQKDVIE 1392
QHPIK YFGAKFG C+E+Q+FR+YR+SH+VIETSQEI DVPYADYF VEG W +++D +
Sbjct: 333 QHPIKIYFGAKFGGCQESQKFRMYRDSHLVIETSQEISDVPYADYFTVEGVWDLKRDCRD 392
Query: 1393 RNKSCILRVYVNVAFSKKTIWKGKIEQSTIEECREAYAAWLDNAHEFLKQNSLEKIDGET 1572
+ CIL VYVNVAF+K+T+WKGKI QST+EECREAYA W+ AHE LKQ LE +G
Sbjct: 393 SIEGCILDVYVNVAFAKRTVWKGKIVQSTLEECREAYAHWIRMAHELLKQKKLENQEGNK 452
Query: 1573 SAPNIIPIDAQFEER 1617
+ P+ A+ EER
Sbjct: 453 LIEDGAPLAAK-EER 466
Score = 201 bits (512), Expect(2) = e-117
Identities = 112/230 (48%), Positives = 152/230 (66%)
Frame = +2
Query: 329 KSEEYRLLFRLPPDEMLVQDFNCAFQESILLQGHMYLFVRHICFYSNIFGFETKKTIPFN 508
KSEEYR LFRLP DE+LVQDFNCA QESIL+QGHMYLF+ +ICFYSNIFG+ETKK IPF
Sbjct: 68 KSEEYRQLFRLPADEILVQDFNCACQESILMQGHMYLFIHYICFYSNIFGYETKKIIPFA 127
Query: 509 EVTCVRKAKTAGIFPNAIEIVVGGKRNFFASFLSRDEAYRLIVDGWSQYVNGTEVLIDHR 688
+++CV++AKTAGIFPNAIEI+ GGK+ FFASFLSRDEA++LI DGW +Y G+ V
Sbjct: 128 DISCVKRAKTAGIFPNAIEILAGGKKYFFASFLSRDEAFKLIHDGWLEY--GSPV---KA 182
Query: 689 DYKSEILSESSVRVIHEKSVGSEQQTNELNPFDRNKDGDLSGNCKLLSNGEDDISVPSSP 868
+ ++ + + ++++ S NEL+ R+++ LSG L ++ +P S
Sbjct: 183 QGEIQVTEQQVNDGLVKRALSSMDLANELDIPLRDENLHLSGISSLPVISQN--GLPPSS 240
Query: 869 LEAEENGEGDAESIDNAEHLSSGKPLVWTMEDASAPEVPDYFTKVAESKF 1018
++ + D + +N W ED AP++ FTKVAE+KF
Sbjct: 241 VQRHAEPDVDVVAANNFN---------WKPEDIDAPKLSSDFTKVAEAKF 281