BLASTX nr result
ID: Coptis21_contig00010778
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00010778
(1433 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containin... 365 2e-98
gb|AAO14624.2|AF467900_1 hypothetical protein [Prunus persica] 334 3e-89
ref|XP_002510504.1| nucleic acid binding protein, putative [Rici... 333 9e-89
ref|XP_002301991.1| predicted protein [Populus trichocarpa] gi|2... 313 9e-83
ref|XP_002306911.1| predicted protein [Populus trichocarpa] gi|2... 305 2e-80
>ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like [Vitis
vinifera]
Length = 457
Score = 365 bits (936), Expect = 2e-98
Identities = 210/434 (48%), Positives = 273/434 (62%), Gaps = 16/434 (3%)
Frame = +3
Query: 3 QVGLGAQDNLQVKASWLLHSSGVGFEDQLPPGFEGAQSTNQLTNKLSQIPLIEWKCPPRF 182
QVGLGAQD+LQ K SWLLHS+G+G +D LPPGFEGA NQL NKLSQIPLI W+CPP+F
Sbjct: 35 QVGLGAQDHLQAKTSWLLHSNGMGSDDNLPPGFEGAHPANQLKNKLSQIPLITWRCPPKF 94
Query: 183 LLNPHWRVVAGEESKEAEVQDQREMRVFEAIYXXXXXXXXXXXXXXELEDSHNEDHQITL 362
+LN W+VVAGEES E EVQ QREMRV EA+Y + ED N+D +I L
Sbjct: 95 VLNFTWQVVAGEESNEVEVQKQREMRVLEAVYPRPSAIPPNPSVSIDGEDMDNDDQKILL 154
Query: 363 IPITPIEDEDVA-QPSSDSIRTNNSPINXXXXXXXXXXVQGFTQKPQRNILTAPKPLSFN 539
IPI P+EDE+ A + S+D++ +PIN G N P P + N
Sbjct: 155 IPIVPVEDEEAALEMSADTV----APINIPMSSQSLLLPPGIPSASSSNAPNIPNPPA-N 209
Query: 540 EKSSAGL---VQPDVVXXXXXXXXXFMRSNEQGSLIDQELLIKILSNPEMIKQLVTD-YG 707
E +AG+ V+PDVV MRSNEQG+LID +LLIKILSNP++I+++VTD
Sbjct: 210 ENVAAGMVPGVEPDVVAAASAAFTAVMRSNEQGNLIDHDLLIKILSNPKIIERIVTDQVV 269
Query: 708 PAANVQSVQMPSTSSLNLSVTQPGIPPGYINRVEPNIPLSVPPASGLFHPVTNAVTSMRH 887
++N Q+V + LS PPG+++RVE NIPLS SG F+ +N +
Sbjct: 270 SSSNPQAVPNQRLPPIALS----DQPPGHVSRVETNIPLSAAIPSGPFYSQSNGPGPVPA 325
Query: 888 ALPSPGIAHITTPAVKPPPV----KDMNYYKSLIQQHGGEKPEAHDRT---PQFV---NH 1037
P P + P+ PPV KD+NYYKSLIQQHGGE+ E D++ QF NH
Sbjct: 326 PRPPPS---MVGPSSSSPPVRPVTKDINYYKSLIQQHGGERQEPQDQSQSHSQFANRPNH 382
Query: 1038 HHMGTKTEPLQS-SKLREPKTKNKKHCLYFNSSRGCKNGANCAFQHDMSVQQRIGSVPEA 1214
H +G E + + K R+ K K K C+YF+SSRGC++GANC++QHD S+QQR+ S+PE
Sbjct: 383 HVLGMNPETVVTHPKPRDSKPKIMKPCIYFHSSRGCRHGANCSYQHDASLQQRVSSMPEV 442
Query: 1215 QSAKRMKVDRQLTG 1256
Q+AKRMK+DR++TG
Sbjct: 443 QNAKRMKMDREITG 456
>gb|AAO14624.2|AF467900_1 hypothetical protein [Prunus persica]
Length = 441
Score = 334 bits (857), Expect = 3e-89
Identities = 200/428 (46%), Positives = 253/428 (59%), Gaps = 11/428 (2%)
Frame = +3
Query: 3 QVGLGAQDNLQVKASWLLHSSGVGFEDQLPPGFEGAQSTNQLTNKLSQIPLIEWKCPPRF 182
QVGL AQD+LQ KASWL HSSG G +D LPPGFEGA S NQL +SQIPLI+W+CPPR
Sbjct: 32 QVGLSAQDHLQAKASWLSHSSGTGSDDILPPGFEGAYSANQLQINVSQIPLIKWRCPPRV 91
Query: 183 LLNPHWRVVAGEESKEAEVQDQREMRVFEAIYXXXXXXXXXXXXXXELEDSHNEDHQITL 362
+LN W+VV GEESKE E+Q+QRE+RV EA+Y ++EDS + D Q +
Sbjct: 92 VLNFTWQVVCGEESKEVEIQNQREIRVLEAVYPRPSAIPLNPSVLADVEDSGHNDVQPPV 151
Query: 363 IPITPIEDEDVAQPSSDSIRTNNSPINXXXXXXXXXXVQGFTQKPQRNILTAPKPLSFNE 542
IPIT IEDEDV +S + + +P N VQG P ++++ + +
Sbjct: 152 IPITSIEDEDVGVDTSSA---SMAPFNIHTSTQSFLSVQGIA-APSQSVVPNNRNHPTSN 207
Query: 543 KSSAGL---VQPDVVXXXXXXXXXFMRSNEQGSLIDQELLIKILSNPEMIKQLVTDYGPA 713
K AG+ V+PDVV + SNE G++ID ELLIKILSNP+MI++LV D
Sbjct: 208 KPVAGIPVGVEPDVVAAASAAFGAIVNSNEHGNMIDHELLIKILSNPKMIEKLVKD---- 263
Query: 714 ANVQSVQMPSTSSLNLSVTQPGIPPGYINRVE-PNIPLSVPPASGLFHPVTNAVTSMR-- 884
P T +S+ P PP +INR E + P S +SG F+P N R
Sbjct: 264 ------PQPMTRPPQMSIADP--PPVHINRTESSSTPSSTALSSGHFYPQPNVAGMGRFP 315
Query: 885 HALPSP--GIAHITTPAVKPPPVKDMNYYKSLIQQHGGEKPEAHDRTPQFVNHH--HMGT 1052
A P P I+ + PAV PPP KD+NYYKSLIQQHGG++ HD P F N H H
Sbjct: 316 DARPPPHAAISVPSPPAVGPPPAKDINYYKSLIQQHGGDR---HDSFPPFGNRHSDHSAI 372
Query: 1053 KTEPLQSSKLREPKTKNKKHCLYFNSSRGCKNGANCAFQHDMSVQQR-IGSVPEAQSAKR 1229
E K R+ K K K C+YFNSSRGC++GANCA+QHD S Q R S PE S KR
Sbjct: 373 NQESNNGYKSRDSKPKIMKPCIYFNSSRGCRHGANCAYQHDASFQPRGSSSAPEVHSTKR 432
Query: 1230 MKVDRQLT 1253
MK+DR+++
Sbjct: 433 MKMDREIS 440
>ref|XP_002510504.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223551205|gb|EEF52691.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 461
Score = 333 bits (853), Expect = 9e-89
Identities = 205/435 (47%), Positives = 257/435 (59%), Gaps = 18/435 (4%)
Frame = +3
Query: 3 QVGLGAQDNLQVKASWLLHSSGVGFEDQLPPGFEGAQSTNQLTNKLSQIPLIEWKCPPRF 182
QVGLGAQD+LQ KASWL H +G +D LPPGFEG NQ KLS IP+I+W+CPPRF
Sbjct: 41 QVGLGAQDHLQAKASWLSHPAGTVGDDILPPGFEGGAPVNQSYVKLSDIPVIKWRCPPRF 100
Query: 183 LLNPHWRVVAGEESKEAEVQDQREMRVFEAIYXXXXXXXXXXXXXXELEDSHNEDHQITL 362
+L+ W+VVAGEESK+ EVQ+QREMRV EA+Y E+ED DHQ+
Sbjct: 101 VLDLTWQVVAGEESKDVEVQNQREMRVLEAVYPRPSAIPPNPAFPAEVEDFRQGDHQVPQ 160
Query: 363 IPITPIEDEDVAQPSSDSIRTNNSPINXXXXXXXXXXVQGFTQKPQRNILTAPKPLSFNE 542
IPITPIEDED +SD P++ PQR+I + NE
Sbjct: 161 IPITPIEDEDATDATSDFRGPQIVPVSSQSHL--------LAPLPQRSIPSISN-TRINE 211
Query: 543 KSSAGL-----VQPDVVXXXXXXXXXFMRSNEQGSLIDQELLIKILSNPEMIKQLVTDYG 707
K AG+ V+PDVV +SNEQGSLID +LLIKIL+NP++I++LV DYG
Sbjct: 212 KPVAGVLPVPGVEPDVVAAASAAFAAVNKSNEQGSLIDHDLLIKILNNPKLIEKLVQDYG 271
Query: 708 PAANVQSVQMPSTSSLNLSVTQPGIPP--------GYINRVEPNIPLS-VPPASGLFHPV 860
A+N Q+V P+ S + LS P PP ++NR E N S +SG F+
Sbjct: 272 AASNGQNVPKPAPSFVPLSDPPPPPPPVSLSDPSYMHMNRTEMNTTSSFAATSSGPFYAQ 331
Query: 861 TNAVTSMRHALPSPGIAHITTPA--VKPPPVKDMNYYKSLIQQHGGEKPEAHDRTPQFVN 1034
N LP+ + PA V P VKDMNYYK+LIQQHGGE+ EA Q+ N
Sbjct: 332 PNGAGP--GYLPNAQVPPPAVPASSVGVPQVKDMNYYKNLIQQHGGERQEA---PHQYGN 386
Query: 1035 HHHM--GTKTEPLQSSKLREPKTKNKKHCLYFNSSRGCKNGANCAFQHDMSVQQRIGSVP 1208
+ GT E L + K RE K K K C+YFNSSRGC++GANCA+QHD S QQR ++
Sbjct: 387 RYSQLAGTNQE-LVNPKSRELKPKIMKPCIYFNSSRGCRHGANCAYQHDPSFQQRSSAIS 445
Query: 1209 EAQSAKRMKVDRQLT 1253
E QSAKRMKVDR+++
Sbjct: 446 EVQSAKRMKVDREIS 460
>ref|XP_002301991.1| predicted protein [Populus trichocarpa] gi|222843717|gb|EEE81264.1|
predicted protein [Populus trichocarpa]
Length = 425
Score = 313 bits (801), Expect = 9e-83
Identities = 190/424 (44%), Positives = 257/424 (60%), Gaps = 11/424 (2%)
Frame = +3
Query: 15 GAQDNLQVKASWLLHSSGVGFEDQLPPGFEGAQSTNQLTNKLSQIPLIEWKCPPRFLLNP 194
GAQD+LQ K+SW HS+G +D LPPGFEG+ ++QL KLS++P+I+W+CPPR +LN
Sbjct: 28 GAQDHLQAKSSWPTHSAGT--DDFLPPGFEGSHPSSQLQIKLSEVPVIKWRCPPRLVLNL 85
Query: 195 HWRVVAGEESKEAEVQDQREMRVFEAIYXXXXXXXXXXXXXXELEDSHNEDHQITLIPIT 374
W++VAGEES+E EVQ+QREMRV EA+Y +LE S + DHQI LIPIT
Sbjct: 86 TWQLVAGEESEEMEVQNQREMRVLEAVYPRPSAIPPNSTFSVDLESSQHGDHQIPLIPIT 145
Query: 375 PIEDEDVAQPSSDSIRTNNSPINXXXXXXXXXXVQGFTQKPQRNILTAPKPLSFNEKSSA 554
PIEDED + SD + + P+N GF Q I + P N K +A
Sbjct: 146 PIEDEDATEAPSDVMGPSMVPMN----SQAQLLASGFPSF-QNGIPSFP-----NGKPTA 195
Query: 555 GL---VQPDVVXXXXXXXXXFMRSNEQGSLIDQELLIKILSNPEMIKQLVTDYGPAANVQ 725
G+ V+PD + +S+EQGSLID +LL+KILSNP++I++LVTD+G AN Q
Sbjct: 196 GVLPGVEPDAMAAVN-------KSSEQGSLIDPDLLLKILSNPKLIEKLVTDHGAVANAQ 248
Query: 726 SV-QMPSTSSLNLSVTQPGIPPGYINRVEPNIPLSV-PPASGLFHPVTNAV---TSMRHA 890
++ P + L VT P +NR E + S+ +SG F+ N V
Sbjct: 249 NIPNTPLSDPLTSHVTLPKPAHIQMNRTESSAQASLTATSSGSFYTQPNGVPMGVPSSAR 308
Query: 891 LPSPGIAHITTPAVKPPPVKDMNYYKSLIQQHGGEKPEAHDRTPQFVN---HHHMGTKTE 1061
+P PG+ T A + KD+NYYK+LIQQHGG+K E TPQ +H +GT ++
Sbjct: 309 IPPPGVPSTPTGATQ---AKDINYYKNLIQQHGGDKQE----TPQQFGSRYNHQVGT-SQ 360
Query: 1062 PLQSSKLREPKTKNKKHCLYFNSSRGCKNGANCAFQHDMSVQQRIGSVPEAQSAKRMKVD 1241
L +SK RE K K K C+YFNSSRGC+NG NCA+QHD S QQ+ + E QS+KRMK+D
Sbjct: 361 DLVNSKSRESKHKIMKPCIYFNSSRGCRNGVNCAYQHDSSSQQKGSGITEVQSSKRMKMD 420
Query: 1242 RQLT 1253
R+++
Sbjct: 421 REIS 424
>ref|XP_002306911.1| predicted protein [Populus trichocarpa] gi|222856360|gb|EEE93907.1|
predicted protein [Populus trichocarpa]
Length = 398
Score = 305 bits (781), Expect = 2e-80
Identities = 187/424 (44%), Positives = 253/424 (59%), Gaps = 10/424 (2%)
Frame = +3
Query: 6 VGLGAQDNLQVKASWLLHSSGVGFEDQLPPGFEGAQSTNQLTNKLSQIPLIEWKCPPRFL 185
VG GAQD+LQ K+SW HS+G +D PPGFEG +QL K+S+IP+I+W+CPPR +
Sbjct: 14 VGSGAQDHLQAKSSWPSHSAGT--DDFQPPGFEGGHPASQLQIKVSEIPVIKWRCPPRLV 71
Query: 186 LNPHWRVVAGEESKEAEVQDQREMRVFEAIYXXXXXXXXXXXXXXELEDSHNEDHQITLI 365
LN W+VV+GEESK+ E Q+QRE+RV EA+Y +LE S + DHQI LI
Sbjct: 72 LNLTWQVVSGEESKDMEFQNQREIRVLEAVYPRPSAIPPNPAFSVDLESSQHNDHQIPLI 131
Query: 366 PITPIEDEDVAQPSSDSIRTNNSPINXXXXXXXXXXVQGFTQKPQRNILTAPKPLSFNEK 545
PITPIEDED A+ SD + + P++ + Q +I + P NEK
Sbjct: 132 PITPIEDEDAAEEPSDVMGPSMGPMS-----SQAQLLASGVPSSQSSIPSIP-----NEK 181
Query: 546 SSAGL---VQPDVVXXXXXXXXXFMRSNEQGSLIDQELLIKILSNPEMIKQLVTDYGPAA 716
+AGL V+P V ++SNEQGSLID +LLIKILSNP+++++LVTDYG A
Sbjct: 182 PTAGLLPGVEPGAVAAASAAFAA-VKSNEQGSLIDHDLLIKILSNPKLVEKLVTDYGAVA 240
Query: 717 NVQSVQMPSTSSLNLSVTQPGIPPGYINRVEPNIPLSVPPASGLFHPVTN----AVTSMR 884
N Q++ P + S+TQ L+ P SG F+ N V
Sbjct: 241 NAQNIPKPPLAE---SITQAS--------------LTATP-SGSFYTQPNGTGMGVLPSA 282
Query: 885 HALPSPGIAHITTPAVKPPPVKDMNYYKSLIQQHGGEKPEAHDRTPQFVN---HHHMGTK 1055
LP PG+ ++P++ KDM+YYK+LIQQHGG++ E TPQ +H +GT
Sbjct: 283 RVLP-PGVP--SSPSIGATQTKDMSYYKNLIQQHGGDRQE----TPQQFGGRYNHQIGT- 334
Query: 1056 TEPLQSSKLREPKTKNKKHCLYFNSSRGCKNGANCAFQHDMSVQQRIGSVPEAQSAKRMK 1235
++ L +SK RE K K K C+YFN+ RGC+NGANCA+QHD S Q++ S+ E QSAKRMK
Sbjct: 335 SQDLVNSKSRESKHKIMKPCIYFNTPRGCRNGANCAYQHDSSSQKKGSSIAEVQSAKRMK 394
Query: 1236 VDRQ 1247
+DR+
Sbjct: 395 MDRE 398