BLASTX nr result

ID: Coptis21_contig00010778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010778
         (1433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containin...   365   2e-98
gb|AAO14624.2|AF467900_1 hypothetical protein [Prunus persica]        334   3e-89
ref|XP_002510504.1| nucleic acid binding protein, putative [Rici...   333   9e-89
ref|XP_002301991.1| predicted protein [Populus trichocarpa] gi|2...   313   9e-83
ref|XP_002306911.1| predicted protein [Populus trichocarpa] gi|2...   305   2e-80

>ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like [Vitis
            vinifera]
          Length = 457

 Score =  365 bits (936), Expect = 2e-98
 Identities = 210/434 (48%), Positives = 273/434 (62%), Gaps = 16/434 (3%)
 Frame = +3

Query: 3    QVGLGAQDNLQVKASWLLHSSGVGFEDQLPPGFEGAQSTNQLTNKLSQIPLIEWKCPPRF 182
            QVGLGAQD+LQ K SWLLHS+G+G +D LPPGFEGA   NQL NKLSQIPLI W+CPP+F
Sbjct: 35   QVGLGAQDHLQAKTSWLLHSNGMGSDDNLPPGFEGAHPANQLKNKLSQIPLITWRCPPKF 94

Query: 183  LLNPHWRVVAGEESKEAEVQDQREMRVFEAIYXXXXXXXXXXXXXXELEDSHNEDHQITL 362
            +LN  W+VVAGEES E EVQ QREMRV EA+Y              + ED  N+D +I L
Sbjct: 95   VLNFTWQVVAGEESNEVEVQKQREMRVLEAVYPRPSAIPPNPSVSIDGEDMDNDDQKILL 154

Query: 363  IPITPIEDEDVA-QPSSDSIRTNNSPINXXXXXXXXXXVQGFTQKPQRNILTAPKPLSFN 539
            IPI P+EDE+ A + S+D++    +PIN            G       N    P P + N
Sbjct: 155  IPIVPVEDEEAALEMSADTV----APINIPMSSQSLLLPPGIPSASSSNAPNIPNPPA-N 209

Query: 540  EKSSAGL---VQPDVVXXXXXXXXXFMRSNEQGSLIDQELLIKILSNPEMIKQLVTD-YG 707
            E  +AG+   V+PDVV          MRSNEQG+LID +LLIKILSNP++I+++VTD   
Sbjct: 210  ENVAAGMVPGVEPDVVAAASAAFTAVMRSNEQGNLIDHDLLIKILSNPKIIERIVTDQVV 269

Query: 708  PAANVQSVQMPSTSSLNLSVTQPGIPPGYINRVEPNIPLSVPPASGLFHPVTNAVTSMRH 887
             ++N Q+V       + LS      PPG+++RVE NIPLS    SG F+  +N    +  
Sbjct: 270  SSSNPQAVPNQRLPPIALS----DQPPGHVSRVETNIPLSAAIPSGPFYSQSNGPGPVPA 325

Query: 888  ALPSPGIAHITTPAVKPPPV----KDMNYYKSLIQQHGGEKPEAHDRT---PQFV---NH 1037
              P P    +  P+   PPV    KD+NYYKSLIQQHGGE+ E  D++    QF    NH
Sbjct: 326  PRPPPS---MVGPSSSSPPVRPVTKDINYYKSLIQQHGGERQEPQDQSQSHSQFANRPNH 382

Query: 1038 HHMGTKTEPLQS-SKLREPKTKNKKHCLYFNSSRGCKNGANCAFQHDMSVQQRIGSVPEA 1214
            H +G   E + +  K R+ K K  K C+YF+SSRGC++GANC++QHD S+QQR+ S+PE 
Sbjct: 383  HVLGMNPETVVTHPKPRDSKPKIMKPCIYFHSSRGCRHGANCSYQHDASLQQRVSSMPEV 442

Query: 1215 QSAKRMKVDRQLTG 1256
            Q+AKRMK+DR++TG
Sbjct: 443  QNAKRMKMDREITG 456


>gb|AAO14624.2|AF467900_1 hypothetical protein [Prunus persica]
          Length = 441

 Score =  334 bits (857), Expect = 3e-89
 Identities = 200/428 (46%), Positives = 253/428 (59%), Gaps = 11/428 (2%)
 Frame = +3

Query: 3    QVGLGAQDNLQVKASWLLHSSGVGFEDQLPPGFEGAQSTNQLTNKLSQIPLIEWKCPPRF 182
            QVGL AQD+LQ KASWL HSSG G +D LPPGFEGA S NQL   +SQIPLI+W+CPPR 
Sbjct: 32   QVGLSAQDHLQAKASWLSHSSGTGSDDILPPGFEGAYSANQLQINVSQIPLIKWRCPPRV 91

Query: 183  LLNPHWRVVAGEESKEAEVQDQREMRVFEAIYXXXXXXXXXXXXXXELEDSHNEDHQITL 362
            +LN  W+VV GEESKE E+Q+QRE+RV EA+Y              ++EDS + D Q  +
Sbjct: 92   VLNFTWQVVCGEESKEVEIQNQREIRVLEAVYPRPSAIPLNPSVLADVEDSGHNDVQPPV 151

Query: 363  IPITPIEDEDVAQPSSDSIRTNNSPINXXXXXXXXXXVQGFTQKPQRNILTAPKPLSFNE 542
            IPIT IEDEDV   +S +   + +P N          VQG    P ++++   +    + 
Sbjct: 152  IPITSIEDEDVGVDTSSA---SMAPFNIHTSTQSFLSVQGIA-APSQSVVPNNRNHPTSN 207

Query: 543  KSSAGL---VQPDVVXXXXXXXXXFMRSNEQGSLIDQELLIKILSNPEMIKQLVTDYGPA 713
            K  AG+   V+PDVV          + SNE G++ID ELLIKILSNP+MI++LV D    
Sbjct: 208  KPVAGIPVGVEPDVVAAASAAFGAIVNSNEHGNMIDHELLIKILSNPKMIEKLVKD---- 263

Query: 714  ANVQSVQMPSTSSLNLSVTQPGIPPGYINRVE-PNIPLSVPPASGLFHPVTNAVTSMR-- 884
                    P T    +S+  P  PP +INR E  + P S   +SG F+P  N     R  
Sbjct: 264  ------PQPMTRPPQMSIADP--PPVHINRTESSSTPSSTALSSGHFYPQPNVAGMGRFP 315

Query: 885  HALPSP--GIAHITTPAVKPPPVKDMNYYKSLIQQHGGEKPEAHDRTPQFVNHH--HMGT 1052
             A P P   I+  + PAV PPP KD+NYYKSLIQQHGG++   HD  P F N H  H   
Sbjct: 316  DARPPPHAAISVPSPPAVGPPPAKDINYYKSLIQQHGGDR---HDSFPPFGNRHSDHSAI 372

Query: 1053 KTEPLQSSKLREPKTKNKKHCLYFNSSRGCKNGANCAFQHDMSVQQR-IGSVPEAQSAKR 1229
              E     K R+ K K  K C+YFNSSRGC++GANCA+QHD S Q R   S PE  S KR
Sbjct: 373  NQESNNGYKSRDSKPKIMKPCIYFNSSRGCRHGANCAYQHDASFQPRGSSSAPEVHSTKR 432

Query: 1230 MKVDRQLT 1253
            MK+DR+++
Sbjct: 433  MKMDREIS 440


>ref|XP_002510504.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223551205|gb|EEF52691.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 461

 Score =  333 bits (853), Expect = 9e-89
 Identities = 205/435 (47%), Positives = 257/435 (59%), Gaps = 18/435 (4%)
 Frame = +3

Query: 3    QVGLGAQDNLQVKASWLLHSSGVGFEDQLPPGFEGAQSTNQLTNKLSQIPLIEWKCPPRF 182
            QVGLGAQD+LQ KASWL H +G   +D LPPGFEG    NQ   KLS IP+I+W+CPPRF
Sbjct: 41   QVGLGAQDHLQAKASWLSHPAGTVGDDILPPGFEGGAPVNQSYVKLSDIPVIKWRCPPRF 100

Query: 183  LLNPHWRVVAGEESKEAEVQDQREMRVFEAIYXXXXXXXXXXXXXXELEDSHNEDHQITL 362
            +L+  W+VVAGEESK+ EVQ+QREMRV EA+Y              E+ED    DHQ+  
Sbjct: 101  VLDLTWQVVAGEESKDVEVQNQREMRVLEAVYPRPSAIPPNPAFPAEVEDFRQGDHQVPQ 160

Query: 363  IPITPIEDEDVAQPSSDSIRTNNSPINXXXXXXXXXXVQGFTQKPQRNILTAPKPLSFNE 542
            IPITPIEDED    +SD       P++                 PQR+I +       NE
Sbjct: 161  IPITPIEDEDATDATSDFRGPQIVPVSSQSHL--------LAPLPQRSIPSISN-TRINE 211

Query: 543  KSSAGL-----VQPDVVXXXXXXXXXFMRSNEQGSLIDQELLIKILSNPEMIKQLVTDYG 707
            K  AG+     V+PDVV           +SNEQGSLID +LLIKIL+NP++I++LV DYG
Sbjct: 212  KPVAGVLPVPGVEPDVVAAASAAFAAVNKSNEQGSLIDHDLLIKILNNPKLIEKLVQDYG 271

Query: 708  PAANVQSVQMPSTSSLNLSVTQPGIPP--------GYINRVEPNIPLS-VPPASGLFHPV 860
             A+N Q+V  P+ S + LS   P  PP         ++NR E N   S    +SG F+  
Sbjct: 272  AASNGQNVPKPAPSFVPLSDPPPPPPPVSLSDPSYMHMNRTEMNTTSSFAATSSGPFYAQ 331

Query: 861  TNAVTSMRHALPSPGIAHITTPA--VKPPPVKDMNYYKSLIQQHGGEKPEAHDRTPQFVN 1034
             N        LP+  +     PA  V  P VKDMNYYK+LIQQHGGE+ EA     Q+ N
Sbjct: 332  PNGAGP--GYLPNAQVPPPAVPASSVGVPQVKDMNYYKNLIQQHGGERQEA---PHQYGN 386

Query: 1035 HHHM--GTKTEPLQSSKLREPKTKNKKHCLYFNSSRGCKNGANCAFQHDMSVQQRIGSVP 1208
             +    GT  E L + K RE K K  K C+YFNSSRGC++GANCA+QHD S QQR  ++ 
Sbjct: 387  RYSQLAGTNQE-LVNPKSRELKPKIMKPCIYFNSSRGCRHGANCAYQHDPSFQQRSSAIS 445

Query: 1209 EAQSAKRMKVDRQLT 1253
            E QSAKRMKVDR+++
Sbjct: 446  EVQSAKRMKVDREIS 460


>ref|XP_002301991.1| predicted protein [Populus trichocarpa] gi|222843717|gb|EEE81264.1|
            predicted protein [Populus trichocarpa]
          Length = 425

 Score =  313 bits (801), Expect = 9e-83
 Identities = 190/424 (44%), Positives = 257/424 (60%), Gaps = 11/424 (2%)
 Frame = +3

Query: 15   GAQDNLQVKASWLLHSSGVGFEDQLPPGFEGAQSTNQLTNKLSQIPLIEWKCPPRFLLNP 194
            GAQD+LQ K+SW  HS+G   +D LPPGFEG+  ++QL  KLS++P+I+W+CPPR +LN 
Sbjct: 28   GAQDHLQAKSSWPTHSAGT--DDFLPPGFEGSHPSSQLQIKLSEVPVIKWRCPPRLVLNL 85

Query: 195  HWRVVAGEESKEAEVQDQREMRVFEAIYXXXXXXXXXXXXXXELEDSHNEDHQITLIPIT 374
             W++VAGEES+E EVQ+QREMRV EA+Y              +LE S + DHQI LIPIT
Sbjct: 86   TWQLVAGEESEEMEVQNQREMRVLEAVYPRPSAIPPNSTFSVDLESSQHGDHQIPLIPIT 145

Query: 375  PIEDEDVAQPSSDSIRTNNSPINXXXXXXXXXXVQGFTQKPQRNILTAPKPLSFNEKSSA 554
            PIEDED  +  SD +  +  P+N            GF    Q  I + P     N K +A
Sbjct: 146  PIEDEDATEAPSDVMGPSMVPMN----SQAQLLASGFPSF-QNGIPSFP-----NGKPTA 195

Query: 555  GL---VQPDVVXXXXXXXXXFMRSNEQGSLIDQELLIKILSNPEMIKQLVTDYGPAANVQ 725
            G+   V+PD +           +S+EQGSLID +LL+KILSNP++I++LVTD+G  AN Q
Sbjct: 196  GVLPGVEPDAMAAVN-------KSSEQGSLIDPDLLLKILSNPKLIEKLVTDHGAVANAQ 248

Query: 726  SV-QMPSTSSLNLSVTQPGIPPGYINRVEPNIPLSV-PPASGLFHPVTNAV---TSMRHA 890
            ++   P +  L   VT P      +NR E +   S+   +SG F+   N V         
Sbjct: 249  NIPNTPLSDPLTSHVTLPKPAHIQMNRTESSAQASLTATSSGSFYTQPNGVPMGVPSSAR 308

Query: 891  LPSPGIAHITTPAVKPPPVKDMNYYKSLIQQHGGEKPEAHDRTPQFVN---HHHMGTKTE 1061
            +P PG+    T A +    KD+NYYK+LIQQHGG+K E    TPQ      +H +GT ++
Sbjct: 309  IPPPGVPSTPTGATQ---AKDINYYKNLIQQHGGDKQE----TPQQFGSRYNHQVGT-SQ 360

Query: 1062 PLQSSKLREPKTKNKKHCLYFNSSRGCKNGANCAFQHDMSVQQRIGSVPEAQSAKRMKVD 1241
             L +SK RE K K  K C+YFNSSRGC+NG NCA+QHD S QQ+   + E QS+KRMK+D
Sbjct: 361  DLVNSKSRESKHKIMKPCIYFNSSRGCRNGVNCAYQHDSSSQQKGSGITEVQSSKRMKMD 420

Query: 1242 RQLT 1253
            R+++
Sbjct: 421  REIS 424


>ref|XP_002306911.1| predicted protein [Populus trichocarpa] gi|222856360|gb|EEE93907.1|
            predicted protein [Populus trichocarpa]
          Length = 398

 Score =  305 bits (781), Expect = 2e-80
 Identities = 187/424 (44%), Positives = 253/424 (59%), Gaps = 10/424 (2%)
 Frame = +3

Query: 6    VGLGAQDNLQVKASWLLHSSGVGFEDQLPPGFEGAQSTNQLTNKLSQIPLIEWKCPPRFL 185
            VG GAQD+LQ K+SW  HS+G   +D  PPGFEG    +QL  K+S+IP+I+W+CPPR +
Sbjct: 14   VGSGAQDHLQAKSSWPSHSAGT--DDFQPPGFEGGHPASQLQIKVSEIPVIKWRCPPRLV 71

Query: 186  LNPHWRVVAGEESKEAEVQDQREMRVFEAIYXXXXXXXXXXXXXXELEDSHNEDHQITLI 365
            LN  W+VV+GEESK+ E Q+QRE+RV EA+Y              +LE S + DHQI LI
Sbjct: 72   LNLTWQVVSGEESKDMEFQNQREIRVLEAVYPRPSAIPPNPAFSVDLESSQHNDHQIPLI 131

Query: 366  PITPIEDEDVAQPSSDSIRTNNSPINXXXXXXXXXXVQGFTQKPQRNILTAPKPLSFNEK 545
            PITPIEDED A+  SD +  +  P++          +       Q +I + P     NEK
Sbjct: 132  PITPIEDEDAAEEPSDVMGPSMGPMS-----SQAQLLASGVPSSQSSIPSIP-----NEK 181

Query: 546  SSAGL---VQPDVVXXXXXXXXXFMRSNEQGSLIDQELLIKILSNPEMIKQLVTDYGPAA 716
             +AGL   V+P  V          ++SNEQGSLID +LLIKILSNP+++++LVTDYG  A
Sbjct: 182  PTAGLLPGVEPGAVAAASAAFAA-VKSNEQGSLIDHDLLIKILSNPKLVEKLVTDYGAVA 240

Query: 717  NVQSVQMPSTSSLNLSVTQPGIPPGYINRVEPNIPLSVPPASGLFHPVTN----AVTSMR 884
            N Q++  P  +    S+TQ                L+  P SG F+   N     V    
Sbjct: 241  NAQNIPKPPLAE---SITQAS--------------LTATP-SGSFYTQPNGTGMGVLPSA 282

Query: 885  HALPSPGIAHITTPAVKPPPVKDMNYYKSLIQQHGGEKPEAHDRTPQFVN---HHHMGTK 1055
              LP PG+   ++P++     KDM+YYK+LIQQHGG++ E    TPQ      +H +GT 
Sbjct: 283  RVLP-PGVP--SSPSIGATQTKDMSYYKNLIQQHGGDRQE----TPQQFGGRYNHQIGT- 334

Query: 1056 TEPLQSSKLREPKTKNKKHCLYFNSSRGCKNGANCAFQHDMSVQQRIGSVPEAQSAKRMK 1235
            ++ L +SK RE K K  K C+YFN+ RGC+NGANCA+QHD S Q++  S+ E QSAKRMK
Sbjct: 335  SQDLVNSKSRESKHKIMKPCIYFNTPRGCRNGANCAYQHDSSSQKKGSSIAEVQSAKRMK 394

Query: 1236 VDRQ 1247
            +DR+
Sbjct: 395  MDRE 398


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