BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010770
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|2...   301   8e-80
emb|CBI38027.3| unnamed protein product [Vitis vinifera]              293   2e-77
ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257...   293   2e-77
ref|NP_565513.1| RNA recognition motif-containing protein [Arabi...   286   3e-75
ref|XP_002880379.1| RNA recognition motif-containing protein [Ar...   283   2e-74

>ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|222850181|gb|EEE87728.1|
           predicted protein [Populus trichocarpa]
          Length = 974

 Score =  301 bits (770), Expect = 8e-80
 Identities = 143/194 (73%), Positives = 167/194 (86%)
 Frame = -2

Query: 583 RKTKTLPIELTDKEDCSEKQKVARTVVFGGLLNADMAEEVLRRAKEVGTVCSITYPLPKE 404
           RK   L  +LTDKE+CSEKQ+VARTV+FGGLLN  MAE+V +RAKE GTVCS+TYPLPKE
Sbjct: 162 RKPAKLVTDLTDKENCSEKQRVARTVIFGGLLNDAMAEDVHQRAKETGTVCSVTYPLPKE 221

Query: 403 ELELNGLAQDGCRMDGAAVLYESVKAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKWK 224
           EL+ +GL QDGCR   +AVL+ SVK AR+SV +LHQ+++KGG+VWARQLGGEG KTQKWK
Sbjct: 222 ELKKHGLEQDGCRSGASAVLFTSVKEARSSVAMLHQKEIKGGIVWARQLGGEGCKTQKWK 281

Query: 223 LIVRNLPFKATVNEIRILFSSVGFVWDVFIPNNSETGLSKGFGFVKFTCKKDAENAVQKV 44
           LI+RNLPFKA  NEI+ +F S G VWDVF+P+NSETGLSKGF FVKFTCK+DAENA+QK 
Sbjct: 282 LIIRNLPFKAKPNEIKGVFESAGCVWDVFVPHNSETGLSKGFAFVKFTCKQDAENAIQKF 341

Query: 43  NGQTFGKRPIAVDW 2
           NGQ FGKRPIAVDW
Sbjct: 342 NGQKFGKRPIAVDW 355


>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score =  293 bits (750), Expect = 2e-77
 Identities = 142/195 (72%), Positives = 164/195 (84%)
 Frame = -2

Query: 586 IRKTKTLPIELTDKEDCSEKQKVARTVVFGGLLNADMAEEVLRRAKEVGTVCSITYPLPK 407
           +RK      +  DK   SEKQ+VARTV+FGGLLNADMAE V  RA+EVGTVCS+TYPLPK
Sbjct: 144 LRKALKPCTDQADKGSFSEKQRVARTVIFGGLLNADMAEVVHLRAREVGTVCSVTYPLPK 203

Query: 406 EELELNGLAQDGCRMDGAAVLYESVKAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKW 227
           EELE +GL+QDGC++D +AVLY SVK A ASV +LHQ+++KGG+VWARQLGGEGSKTQKW
Sbjct: 204 EELEHHGLSQDGCKIDASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKW 263

Query: 226 KLIVRNLPFKATVNEIRILFSSVGFVWDVFIPNNSETGLSKGFGFVKFTCKKDAENAVQK 47
           KLIVRNLPFKA V EI+ +FSS GFVWD FIP NSETGLS+GF FVKFT K+DAENA+QK
Sbjct: 264 KLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKFTSKQDAENAIQK 323

Query: 46  VNGQTFGKRPIAVDW 2
            NG+  GKRPIAVDW
Sbjct: 324 FNGEKIGKRPIAVDW 338


>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
          Length = 972

 Score =  293 bits (750), Expect = 2e-77
 Identities = 142/195 (72%), Positives = 164/195 (84%)
 Frame = -2

Query: 586 IRKTKTLPIELTDKEDCSEKQKVARTVVFGGLLNADMAEEVLRRAKEVGTVCSITYPLPK 407
           +RK      +  DK   SEKQ+VARTV+FGGLLNADMAE V  RA+EVGTVCS+TYPLPK
Sbjct: 163 LRKALKPCTDQADKGSFSEKQRVARTVIFGGLLNADMAEVVHLRAREVGTVCSVTYPLPK 222

Query: 406 EELELNGLAQDGCRMDGAAVLYESVKAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKW 227
           EELE +GL+QDGC++D +AVLY SVK A ASV +LHQ+++KGG+VWARQLGGEGSKTQKW
Sbjct: 223 EELEHHGLSQDGCKIDASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKW 282

Query: 226 KLIVRNLPFKATVNEIRILFSSVGFVWDVFIPNNSETGLSKGFGFVKFTCKKDAENAVQK 47
           KLIVRNLPFKA V EI+ +FSS GFVWD FIP NSETGLS+GF FVKFT K+DAENA+QK
Sbjct: 283 KLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKFTSKQDAENAIQK 342

Query: 46  VNGQTFGKRPIAVDW 2
            NG+  GKRPIAVDW
Sbjct: 343 FNGEKIGKRPIAVDW 357


>ref|NP_565513.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|4567275|gb|AAD23688.1| expressed protein [Arabidopsis
           thaliana] gi|16604631|gb|AAL24108.1| unknown protein
           [Arabidopsis thaliana] gi|27754736|gb|AAO22811.1|
           unknown protein [Arabidopsis thaliana]
           gi|330252084|gb|AEC07178.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 1003

 Score =  286 bits (731), Expect = 3e-75
 Identities = 136/194 (70%), Positives = 162/194 (83%)
 Frame = -2

Query: 583 RKTKTLPIELTDKEDCSEKQKVARTVVFGGLLNADMAEEVLRRAKEVGTVCSITYPLPKE 404
           R TK L ++L DKE CS+KQ+VARTV+FGGL NA+MAE V  R KE+GTVCS+ YPLPKE
Sbjct: 214 RPTK-LHVDLPDKETCSDKQRVARTVIFGGLANAEMAEVVHSRVKEIGTVCSVRYPLPKE 272

Query: 403 ELELNGLAQDGCRMDGAAVLYESVKAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKWK 224
           EL+ NGL QDGCR + +AVL+ SVK+A A+V  LHQ +VKG L+WARQLGGEGSK QKWK
Sbjct: 273 ELQQNGLTQDGCRAEASAVLFTSVKSACAAVAKLHQTEVKGNLIWARQLGGEGSKAQKWK 332

Query: 223 LIVRNLPFKATVNEIRILFSSVGFVWDVFIPNNSETGLSKGFGFVKFTCKKDAENAVQKV 44
           LI+RNLPF+A  ++I+++FS+VGFVWDVFIP N ETGL KGF FVKFTCKKDA NA++K 
Sbjct: 333 LIIRNLPFQAKPSDIKVVFSAVGFVWDVFIPKNFETGLPKGFAFVKFTCKKDAANAIKKF 392

Query: 43  NGQTFGKRPIAVDW 2
           NG  FGKRPIAVDW
Sbjct: 393 NGHMFGKRPIAVDW 406


>ref|XP_002880379.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297326218|gb|EFH56638.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  283 bits (724), Expect = 2e-74
 Identities = 136/200 (68%), Positives = 162/200 (81%), Gaps = 1/200 (0%)
 Frame = -2

Query: 598 QSKVIRKTKT-LPIELTDKEDCSEKQKVARTVVFGGLLNADMAEEVLRRAKEVGTVCSIT 422
           +  + RK  T L ++L DKE CS+KQ+VARTV+FGGL NA+MAE V  R KE+GTVCS+ 
Sbjct: 189 EKPIERKGPTKLHVDLPDKETCSDKQRVARTVIFGGLANAEMAEVVHSRVKEIGTVCSVR 248

Query: 421 YPLPKEELELNGLAQDGCRMDGAAVLYESVKAARASVGVLHQQKVKGGLVWARQLGGEGS 242
           YPLPKEEL+ NGL QDGCR + +AVL+ SVK+A A V  LHQ ++KG L+WARQLGGEGS
Sbjct: 249 YPLPKEELQQNGLTQDGCRAEASAVLFTSVKSACAVVAKLHQTEIKGNLIWARQLGGEGS 308

Query: 241 KTQKWKLIVRNLPFKATVNEIRILFSSVGFVWDVFIPNNSETGLSKGFGFVKFTCKKDAE 62
           K QKWKLI+RNLPF+A  ++I+ +FS+VGFVWDVFIP N ETGL KGF FVKFTCKKDAE
Sbjct: 309 KAQKWKLIIRNLPFQAKPSDIKEVFSAVGFVWDVFIPKNFETGLPKGFAFVKFTCKKDAE 368

Query: 61  NAVQKVNGQTFGKRPIAVDW 2
           NA+Q  NG  FGKRPIAVDW
Sbjct: 369 NAIQMFNGHMFGKRPIAVDW 388