BLASTX nr result

ID: Coptis21_contig00010764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010764
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516035.1| conserved hypothetical protein [Ricinus comm...    71   2e-10
ref|XP_002303288.1| predicted protein [Populus trichocarpa] gi|2...    69   7e-10
ref|XP_002516037.1| conserved hypothetical protein [Ricinus comm...    67   3e-09
ref|XP_003532780.1| PREDICTED: uncharacterized protein LOC100802...    65   1e-08
ref|XP_002284175.1| PREDICTED: uncharacterized protein LOC100267...    65   1e-08

>ref|XP_002516035.1| conserved hypothetical protein [Ricinus communis]
           gi|223544940|gb|EEF46455.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 483

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 30/45 (66%), Positives = 38/45 (84%)
 Frame = +3

Query: 159 VEIPVAVGVTLYQAISLYNGKAEIASKGDTNTNWKVHQLILYSAC 293
           ++IPVA+GV+ YQA+SLY GK  IASKG+  TNW+VHQL+LY AC
Sbjct: 302 LQIPVALGVSSYQAVSLYKGKRRIASKGEAGTNWRVHQLVLYCAC 346


>ref|XP_002303288.1| predicted protein [Populus trichocarpa] gi|222840720|gb|EEE78267.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 29/45 (64%), Positives = 38/45 (84%)
 Frame = +3

Query: 159 VEIPVAVGVTLYQAISLYNGKAEIASKGDTNTNWKVHQLILYSAC 293
           ++IPVAVGV+ Y+A+SLY G  +IASKG+T TNW+ HQL+LY AC
Sbjct: 247 LQIPVAVGVSSYEAVSLYKGTRKIASKGETGTNWRAHQLVLYCAC 291


>ref|XP_002516037.1| conserved hypothetical protein [Ricinus communis]
           gi|223544942|gb|EEF46457.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 481

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 29/44 (65%), Positives = 39/44 (88%)
 Frame = +3

Query: 159 VEIPVAVGVTLYQAISLYNGKAEIASKGDTNTNWKVHQLILYSA 290
           ++IPVAVGVT Y+AISLY G+ +IAS+G+ +TNWK+HQL+ YSA
Sbjct: 300 LQIPVAVGVTGYEAISLYKGQRKIASRGEVSTNWKIHQLVSYSA 343


>ref|XP_003532780.1| PREDICTED: uncharacterized protein LOC100802321 [Glycine max]
          Length = 434

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 26/45 (57%), Positives = 35/45 (77%)
 Frame = +3

Query: 159 VEIPVAVGVTLYQAISLYNGKAEIASKGDTNTNWKVHQLILYSAC 293
           +++P+ VG T+Y+A+ LY GK +IASKGD  T W+VHQLILY  C
Sbjct: 254 LQVPITVGTTVYEAVLLYKGKRKIASKGDQQTRWRVHQLILYCTC 298


>ref|XP_002284175.1| PREDICTED: uncharacterized protein LOC100267889 [Vitis vinifera]
           gi|296081886|emb|CBI20891.3| unnamed protein product
           [Vitis vinifera]
          Length = 478

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 29/45 (64%), Positives = 38/45 (84%)
 Frame = +3

Query: 159 VEIPVAVGVTLYQAISLYNGKAEIASKGDTNTNWKVHQLILYSAC 293
           ++IPV+VGV+LY+A+SLY G+  IASKGD  TN++VHQLILY  C
Sbjct: 297 MQIPVSVGVSLYEAVSLYKGRRIIASKGDAGTNFRVHQLILYCFC 341


Top