BLASTX nr result

ID: Coptis21_contig00010758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010758
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...    58   9e-07

>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/78 (38%), Positives = 43/78 (55%)
 Frame = +3

Query: 3   LQVENMDGINLNGKDSLGILEKAIESGERKKGMXXXXXXXXXXXVTXXXXXXXXXXXXXX 182
           LQVE+M+G +LNGK+SL IL++A+E+G RKK             +               
Sbjct: 253 LQVEDMEGRHLNGKESLVILQEALENGRRKKAKGEEGKARYERYLEMMGERRERRLRREK 312

Query: 183 XLDALCVAIGVSILASFW 236
            LD +C+A+GV+I  SFW
Sbjct: 313 TLDMVCIALGVTIFLSFW 330


Top