BLASTX nr result

ID: Coptis21_contig00010757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010757
         (1309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK16652.1| CDC2 homolog [Populus tremula x Populus tremuloides]   561   e-157
ref|XP_002306004.1| hypothetical protein POPTRDRAFT_648419 [Popu...   559   e-157
gb|ABK93808.1| unknown [Populus trichocarpa]                          556   e-156
gb|AAG01534.1|AF289467_1 cyclin-dependent kinase A:4 [Nicotiana ...   556   e-156
gb|AAL47481.1| cyclin-dependent kinase [Helianthus tuberosus]         555   e-156

>gb|AAK16652.1| CDC2 homolog [Populus tremula x Populus tremuloides]
          Length = 294

 Score =  561 bits (1445), Expect = e-157
 Identities = 274/294 (93%), Positives = 285/294 (96%)
 Frame = +3

Query: 102 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREIALLKEMQH 281
           MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREI+LLKEMQH
Sbjct: 1   MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 282 SNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFSKDRRIVKKFLYQILRGIAYCHS 461
            NIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEF+KD R+VK FLYQILRGIAYCHS
Sbjct: 61  GNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFAKDPRLVKTFLYQILRGIAYCHS 120

Query: 462 HRVLHRDLKPQNLLIDRRSNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH 641
           HRVLHRDLKPQNLLIDRR+NALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH
Sbjct: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH 180

Query: 642 YSTPVDVWSVGCIFCEMVNQRPLFPGDSEIDELFKIFRIMGTPNEETWPGVSSLPDYKSA 821
           YSTPVDVWSVGCIF EMVNQ+PLFPGDSEIDELFKIFRI+GTPNE+TWPGV+SLPD+KSA
Sbjct: 181 YSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSA 240

Query: 822 FPKWPSKDLTTVVPDLEPAGLDLLSKMLYLDPCKRITARSALEHEYFKDIGSVP 983
           FPKWPSKDL TVVP LE AG+DLLSKML+LDP KRITARSALEHEYFKDIG VP
Sbjct: 241 FPKWPSKDLATVVPTLEKAGVDLLSKMLFLDPTKRITARSALEHEYFKDIGFVP 294


>ref|XP_002306004.1| hypothetical protein POPTRDRAFT_648419 [Populus trichocarpa]
           gi|222848968|gb|EEE86515.1| hypothetical protein
           POPTRDRAFT_648419 [Populus trichocarpa]
          Length = 294

 Score =  559 bits (1440), Expect = e-157
 Identities = 273/294 (92%), Positives = 284/294 (96%)
 Frame = +3

Query: 102 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREIALLKEMQH 281
           MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREI+LLKEMQH
Sbjct: 1   MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 282 SNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFSKDRRIVKKFLYQILRGIAYCHS 461
            NIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEF+ D R+VK FLYQILRGIAYCHS
Sbjct: 61  GNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFANDPRLVKTFLYQILRGIAYCHS 120

Query: 462 HRVLHRDLKPQNLLIDRRSNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH 641
           HRVLHRDLKPQNLLIDRR+NALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH
Sbjct: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH 180

Query: 642 YSTPVDVWSVGCIFCEMVNQRPLFPGDSEIDELFKIFRIMGTPNEETWPGVSSLPDYKSA 821
           YSTPVDVWSVGCIF EMVNQ+PLFPGDSEIDELFKIFRI+GTPNE+TWPGV+SLPD+KSA
Sbjct: 181 YSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSA 240

Query: 822 FPKWPSKDLTTVVPDLEPAGLDLLSKMLYLDPCKRITARSALEHEYFKDIGSVP 983
           FPKWPSKDL TVVP LE AG+DLLSKML+LDP KRITARSALEHEYFKDIG VP
Sbjct: 241 FPKWPSKDLATVVPTLEKAGVDLLSKMLFLDPTKRITARSALEHEYFKDIGFVP 294


>gb|ABK93808.1| unknown [Populus trichocarpa]
          Length = 294

 Score =  556 bits (1433), Expect = e-156
 Identities = 272/294 (92%), Positives = 283/294 (96%)
 Frame = +3

Query: 102 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREIALLKEMQH 281
           M QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREI+LLKEMQH
Sbjct: 1   MGQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 282 SNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFSKDRRIVKKFLYQILRGIAYCHS 461
            NIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEF+ D R+VK FLYQILRGIAYCHS
Sbjct: 61  GNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFANDPRLVKTFLYQILRGIAYCHS 120

Query: 462 HRVLHRDLKPQNLLIDRRSNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH 641
           HRVLHRDLKPQNLLIDRR+NALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH
Sbjct: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH 180

Query: 642 YSTPVDVWSVGCIFCEMVNQRPLFPGDSEIDELFKIFRIMGTPNEETWPGVSSLPDYKSA 821
           YSTPVDVWSVGCIF EMVNQ+PLFPGDSEIDELFKIFRI+GTPNE+TWPGV+SLPD+KSA
Sbjct: 181 YSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSA 240

Query: 822 FPKWPSKDLTTVVPDLEPAGLDLLSKMLYLDPCKRITARSALEHEYFKDIGSVP 983
           FPKWPSKDL TVVP LE AG+DLLSKML+LDP KRITARSALEHEYFKDIG VP
Sbjct: 241 FPKWPSKDLATVVPTLEKAGVDLLSKMLFLDPTKRITARSALEHEYFKDIGFVP 294


>gb|AAG01534.1|AF289467_1 cyclin-dependent kinase A:4 [Nicotiana tabacum]
          Length = 294

 Score =  556 bits (1433), Expect = e-156
 Identities = 271/294 (92%), Positives = 284/294 (96%)
 Frame = +3

Query: 102 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREIALLKEMQH 281
           MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREI+LLKEMQH
Sbjct: 1   MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 282 SNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFSKDRRIVKKFLYQILRGIAYCHS 461
           +NIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFSKD R+VK FLYQILRGIAYCHS
Sbjct: 61  ANIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFSKDPRLVKMFLYQILRGIAYCHS 120

Query: 462 HRVLHRDLKPQNLLIDRRSNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH 641
           HRVLHRDLKPQNLLIDRR+NALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH
Sbjct: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH 180

Query: 642 YSTPVDVWSVGCIFCEMVNQRPLFPGDSEIDELFKIFRIMGTPNEETWPGVSSLPDYKSA 821
           YSTPVDVWSVGCIF EMV QRPLFPGDSEIDELFKIFR+MGTPNE+TWPGV++LPD+KSA
Sbjct: 181 YSTPVDVWSVGCIFAEMVTQRPLFPGDSEIDELFKIFRVMGTPNEDTWPGVTTLPDFKSA 240

Query: 822 FPKWPSKDLTTVVPDLEPAGLDLLSKMLYLDPCKRITARSALEHEYFKDIGSVP 983
           FPKWPSKDL T+VP+L+ AGLDLL KML LDP KRITAR+ALEHEYFKDIG VP
Sbjct: 241 FPKWPSKDLATIVPNLDGAGLDLLDKMLRLDPSKRITARNALEHEYFKDIGYVP 294


>gb|AAL47481.1| cyclin-dependent kinase [Helianthus tuberosus]
          Length = 294

 Score =  555 bits (1430), Expect = e-156
 Identities = 272/294 (92%), Positives = 283/294 (96%)
 Frame = +3

Query: 102 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREIALLKEMQH 281
           M+QYEKVEKIGEGTYGVVYKARD+VTNETIALKKIRLEQEDEGVPSTAIREI+LLKEMQH
Sbjct: 1   MEQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 282 SNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFSKDRRIVKKFLYQILRGIAYCHS 461
            NIVRLQDVVHS+KRLYLVFEYLDLDLKKHMDS PEFSKD R+VK FLYQILRGIAYCHS
Sbjct: 61  GNIVRLQDVVHSDKRLYLVFEYLDLDLKKHMDSCPEFSKDPRLVKTFLYQILRGIAYCHS 120

Query: 462 HRVLHRDLKPQNLLIDRRSNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH 641
           HRVLHRDLKPQNLLIDRR+NALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH
Sbjct: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH 180

Query: 642 YSTPVDVWSVGCIFCEMVNQRPLFPGDSEIDELFKIFRIMGTPNEETWPGVSSLPDYKSA 821
           YSTPVDVWSVGCIF EMVNQRPLFPGDSEIDELFKIFRIMGTPNEETWPGV+SLPD+KSA
Sbjct: 181 YSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRIMGTPNEETWPGVTSLPDFKSA 240

Query: 822 FPKWPSKDLTTVVPDLEPAGLDLLSKMLYLDPCKRITARSALEHEYFKDIGSVP 983
           FPKW SKDL TVVP+LE AGLDLL KML+LDP KRITAR+ALEHEYFKDIG VP
Sbjct: 241 FPKWSSKDLATVVPNLEKAGLDLLCKMLWLDPSKRITARTALEHEYFKDIGFVP 294


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