BLASTX nr result
ID: Coptis21_contig00010756
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00010756 (1552 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera] 662 0.0 ref|NP_190280.5| antiviral helicase SKI2 [Arabidopsis thaliana] ... 631 e-178 ref|XP_003552970.1| PREDICTED: helicase SKI2W-like [Glycine max] 629 e-178 ref|XP_004163748.1| PREDICTED: helicase SKI2W-like [Cucumis sati... 625 e-177 ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sati... 625 e-177 >ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera] Length = 1379 Score = 662 bits (1709), Expect = 0.0 Identities = 336/524 (64%), Positives = 399/524 (76%), Gaps = 34/524 (6%) Frame = +1 Query: 82 MDRVDAGTDIAFKIGFSGYSGHLRIEPLPPVERYDPLKSLPDFILPSAFQPETPESIKKH 261 M+R+ G D +F++GFSG+SGHLR+EPLPPVER +PL SLPDFI P AF ETPE+IK++ Sbjct: 1 MNRIQVGHDASFRVGFSGHSGHLRLEPLPPVERPNPLSSLPDFISPPAFARETPETIKEY 60 Query: 262 WEEKYLLPELDKDEFSVEKSGRQWDFDWFDRAKVHLEPTLPRTVIVPEYELPFKRRKD-- 435 E+ YLLP LD DEFS EK GRQWDFDWFDRAKV LEP+LPR+V+V ++ELPF+R K Sbjct: 61 IEDTYLLPRLDPDEFSPEKVGRQWDFDWFDRAKVPLEPSLPRSVVVQKWELPFRRSKKES 120 Query: 436 ----WEPRSMEMDVSELMEGAHESGSTPRMPGPAKDFVRGSIGNRPFRPGGLDVSQSAQK 603 WEP S E++VS+LM GA ++G PRM GPAKDF+RGSI NRPFRPGGLD SQS + Sbjct: 121 ASGKWEPISEEVEVSDLMVGAQDTGPLPRMVGPAKDFIRGSINNRPFRPGGLDDSQSLDR 180 Query: 604 VVPEGARSGQWVREILDGGSAQVIPPGFKHGLDLGDLMAHPYSWKVYKDQSEVKSSSDDK 783 + P GA +G+WV+E+L+GG A V+PP FK GLDLGDL A+ +SWKVYK QS +K S++ Sbjct: 181 IPPLGASNGEWVQEVLNGGPALVVPPSFKQGLDLGDLKAYSHSWKVYKGQSALKGKSEEN 240 Query: 784 LSRISVQFGDLFAKAWEDDIIEESQ----------------------------HRDDAES 879 L+++S+QF DL KAWE+D + ES+ H +++S Sbjct: 241 LNKLSIQFDDLLKKAWEEDDVAESKEDGIICTFYILALGTNVCKVTDSWAKSCHSPESDS 300 Query: 880 AKAGIKMEEEGDIPRNVSDTELKKEADLCSSVHDTESLVLDEILSTDTGRSILGSNEISV 1059 K ++++E + S+V D ES VLDEILS ++G S G + S Sbjct: 301 IKLEVQLDE----------------VEASSNVGDLESSVLDEILSVESG-SKPGLDGTSD 343 Query: 1060 PGGPQKKEAWAIASGSESIADRFCELVPDMALEFPFELDTFQKEAIYYLEKGESVFVAAH 1239 GG QKKEAWA++ G+E IAD F ELVPDMAL+FPFELDTFQKEAIYYLEKG+SVFVAAH Sbjct: 344 DGGRQKKEAWAVSGGNEGIADHFHELVPDMALDFPFELDTFQKEAIYYLEKGDSVFVAAH 403 Query: 1240 TSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEAS 1419 TSAGKTVVAEYAFALA+KHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEAS Sbjct: 404 TSAGKTVVAEYAFALASKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEAS 463 Query: 1420 CLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWE 1551 CLIMTTEILRSMLY+GADIIRDIEWVIFDEVHYVNDVERGVVWE Sbjct: 464 CLIMTTEILRSMLYKGADIIRDIEWVIFDEVHYVNDVERGVVWE 507 >ref|NP_190280.5| antiviral helicase SKI2 [Arabidopsis thaliana] gi|332644703|gb|AEE78224.1| antiviral helicase SKI2 [Arabidopsis thaliana] Length = 1347 Score = 631 bits (1627), Expect = e-178 Identities = 319/499 (63%), Positives = 384/499 (76%), Gaps = 9/499 (1%) Frame = +1 Query: 82 MDRVDAGTDIAFKIGFSGYSGHLRIEPLPPVERYDPLKSLPDFILPSAFQPETPESIKKH 261 M++V+AG ++ F++GFSG+ GHLR+EP ER D L SLPDF+ P AF ET ESIKKH Sbjct: 1 MNKVEAGNELGFRVGFSGHGGHLRVEPFYTAERDDALNSLPDFVSPPAFAKETKESIKKH 60 Query: 262 WEEKYLLPELDKDEFSVEKSGRQWDFDWFDRAKVHLEPTLPRTVIVPEYELPFKRRKD-- 435 EEKYL+P L+ D+FS EK+ QWDFDWF R K+ L+P+LPR+V+VP +ELPF+R+K+ Sbjct: 61 IEEKYLIPRLEPDQFSAEKAENQWDFDWFSRVKMPLQPSLPRSVVVPTWELPFRRQKEDT 120 Query: 436 ----WEPRSMEMDVSELMEGAHESGSTPRMPGPAKDFVRGSIGNRPFRPGGLDVSQSAQK 603 WEP+S+E+D+SE M G +SG PRM GP KDF+RGS+ NRPFRPGGL+ SQS+++ Sbjct: 121 ENGAWEPKSVEVDLSEQMYGDQDSGFFPRMVGPPKDFLRGSVNNRPFRPGGLEDSQSSER 180 Query: 604 VVPEGARSGQWVREILDGGSAQVIPPGFKHGLDLGDLMAHPYSWKVYKDQSEVKSSSDDK 783 V+PEG SGQWV+E+L+GG AQ +PP FK LDLGDLM +P +W VY+D S ++SD+ Sbjct: 181 VLPEGVSSGQWVQELLNGGPAQTVPPSFKQSLDLGDLMPYPQTWSVYEDHSSHGNASDEN 240 Query: 784 LSRISVQFGDLFAKAWEDDIIEESQHRDDAESAKAGIKMEEEGDIPRNVSDTELKKEADL 963 S++S+QF DLF KAWE+D E + DD + K E E D ++S+ E+ K + Sbjct: 241 SSKLSIQFDDLFKKAWEEDTFSELEG-DDHTAGSESPKAEAEPDAKASISN-EVSKGLE- 297 Query: 964 CSSVHDTESLVLDEILSTDTGRSILGSNEISVPGGPQK---KEAWAIASGSESIADRFCE 1134 T+ VLDEILS+ ++ + S E +V G K KE WA S+ IADRF E Sbjct: 298 ------TDVTVLDEILSS--AKTAIMSEE-AVTGSSDKQLRKEGWATKGDSQDIADRFYE 348 Query: 1135 LVPDMALEFPFELDTFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVY 1314 LVPDMA+EFPFELD FQKEAI LEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVY Sbjct: 349 LVPDMAIEFPFELDNFQKEAICCLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVY 408 Query: 1315 TAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEW 1494 TAPIKTISNQKYRDFCGKFDVGLLTGDVS+RPEASCLIMTTEILRSMLYRGADIIRDIEW Sbjct: 409 TAPIKTISNQKYRDFCGKFDVGLLTGDVSIRPEASCLIMTTEILRSMLYRGADIIRDIEW 468 Query: 1495 VIFDEVHYVNDVERGVVWE 1551 VIFDEVHYVNDVERGVVWE Sbjct: 469 VIFDEVHYVNDVERGVVWE 487 >ref|XP_003552970.1| PREDICTED: helicase SKI2W-like [Glycine max] Length = 1342 Score = 629 bits (1621), Expect = e-178 Identities = 328/498 (65%), Positives = 380/498 (76%), Gaps = 8/498 (1%) Frame = +1 Query: 82 MDRVDAGTDIAFKIGFSGYSGHLRIEPLPPVERYDPLKSLPDFILPSAFQPETPESIKKH 261 MD + A ++AF++GFSG+SGHLR+EPL ER +PL+S+PDFI P AF ETPESIKK+ Sbjct: 1 MDPIQAANELAFRVGFSGHSGHLRLEPLSTEERRNPLRSIPDFIPPPAFPSETPESIKKY 60 Query: 262 WEEKYLLPELDKDEFSVEKSGRQWDFDWFDRAKVHLEPTLPRTVIVPEYELPFKRRKD-- 435 EE YL P LD D+FS EK GRQW+FDWFDRAKV LEP+LPRT++VP +E PF+R + Sbjct: 61 IEETYLQPRLDPDDFSPEKVGRQWEFDWFDRAKVPLEPSLPRTMVVPVWEPPFRRSNNGS 120 Query: 436 ----WEPRSMEMDVSELMEGAHESGSTPRMPGPAKDFVRGSIGNRPFRPGGLDVSQSAQK 603 WEP+ E+DV++L GA ESG PR G KDFVRGSI NRPFRPGGLD S+S + Sbjct: 121 VKGIWEPKFEEVDVADLTSGAVESGPLPRTSG--KDFVRGSINNRPFRPGGLDDSRSLDR 178 Query: 604 VVPEGARSGQWVREILDGGSAQVIPPGFKHGLDLGDLMAHPYSWKVYKDQSEVKSSSDDK 783 ++PEGA +G+WV EIL+GG AQ IPP K GLD G L +P SW V K+ + +KSSSD+K Sbjct: 179 ILPEGASNGEWVHEILNGGPAQTIPPSLKQGLDFGMLKPYPCSWNVCKEANSLKSSSDEK 238 Query: 784 LSRISVQFGDLFAKAWEDDII--EESQHRDDAESAKAGIKMEEEGDIPRNVSDTELKKEA 957 LS +SVQF DLF KAW++D + +E H + E+ I +E E V TE+ A Sbjct: 239 LSGLSVQFDDLFKKAWDEDAVGDQEDGHLSEVET----ITLEAE------VGTTEVSSRA 288 Query: 958 DLCSSVHDTESLVLDEILSTDTGRSILGSNEISVPGGPQKKEAWAIASGSESIADRFCEL 1137 H++E + LD+ILS D+ S L + + G QKKEAWAI SE I D F EL Sbjct: 289 ------HESE-MSLDDILSADSEGSKLHLDGFNDEIGQQKKEAWAIHETSEQIVDSFHEL 341 Query: 1138 VPDMALEFPFELDTFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYT 1317 VPDMALEFPFELD FQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALA+KHCTRAVYT Sbjct: 342 VPDMALEFPFELDAFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYT 401 Query: 1318 APIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWV 1497 APIKTISNQKYRD CGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWV Sbjct: 402 APIKTISNQKYRDLCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWV 461 Query: 1498 IFDEVHYVNDVERGVVWE 1551 IFDEVHYVNDVERGVVWE Sbjct: 462 IFDEVHYVNDVERGVVWE 479 >ref|XP_004163748.1| PREDICTED: helicase SKI2W-like [Cucumis sativus] Length = 684 Score = 625 bits (1613), Expect = e-177 Identities = 322/501 (64%), Positives = 380/501 (75%), Gaps = 11/501 (2%) Frame = +1 Query: 82 MDRVDAGTDIAFKIGFSGYSGHLRIEPLPPVERYDPLKSLPDFILPSAFQPETPESIKKH 261 MD ++A +++F++GFSG+SGHLR+EPL VER P++SLPDFILP AF ETPE+IK + Sbjct: 1 MDPIEATKELSFRVGFSGHSGHLRVEPLSTVERSTPIRSLPDFILPPAFPKETPETIKNY 60 Query: 262 WEEKYLLPELDKDEFSVEKSGRQWDFDWFDRAKVHLEPTLPRTVIVPEYELPFKRRKD-- 435 EE YL P LD DEFS EK GRQWDFDWF+ AKV L+P+ PR+V+VP + LPF+R K Sbjct: 61 IEETYLQPRLDPDEFSPEKVGRQWDFDWFEMAKVSLDPSPPRSVVVPTWVLPFERPKKDG 120 Query: 436 -----WEPRSMEMDVSELMEGAHESGSTPRMPGPAKDFVRGSIGNRPFRPGGLDVSQSAQ 600 WEP S ++DVSEL ESGS PR+PGPAKDFVRGSI NRPFRPGGLD SQS Sbjct: 121 AAGGTWEPDSRQVDVSELNVETQESGSQPRVPGPAKDFVRGSINNRPFRPGGLDDSQSID 180 Query: 601 KVVPEGARSGQWVREILDGGSAQVIPPGFKHGLDLGDLMAHPYSWKVYKDQSE--VKSSS 774 +++P+ A +G+WV E+L+GG AQ IPP K GLDLGDL +P SW VY++QS K+S Sbjct: 181 RILPDAASNGEWVHEVLNGGPAQFIPPILKKGLDLGDLKEYPNSWNVYENQSSSSFKTSP 240 Query: 775 DDKLSRISVQFGDLFAKAWEDDIIEESQHRDDAESAKAGIKMEEEGDIPR--NVSDTELK 948 + LS +SVQF DLF KAWE+D IE S + G+ G P+ ++ + Sbjct: 241 IENLSELSVQFDDLFKKAWEEDAIE---------SVEDGVY---SGQSPKAESIKSEDRV 288 Query: 949 KEADLCSSVHDTESLVLDEILSTDTGRSILGSNEISVPGGPQKKEAWAIASGSESIADRF 1128 +E + S LDEILS ++G L S++ + G QKKEAW + G E I+ RF Sbjct: 289 RELEAISIAPAPGISALDEILSLESGGFSLSSDQATEVGA-QKKEAWVVVGGREDISLRF 347 Query: 1129 CELVPDMALEFPFELDTFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRA 1308 +LVPDMAL+FPFELDTFQKEAIY+LEKG+SVFVAAHTSAGKTVVAEYAFALATKHCTRA Sbjct: 348 HDLVPDMALDFPFELDTFQKEAIYHLEKGDSVFVAAHTSAGKTVVAEYAFALATKHCTRA 407 Query: 1309 VYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDI 1488 VYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDI Sbjct: 408 VYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDI 467 Query: 1489 EWVIFDEVHYVNDVERGVVWE 1551 EWVIFDEVHYVND+ERGVVWE Sbjct: 468 EWVIFDEVHYVNDIERGVVWE 488 >ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sativus] Length = 1352 Score = 625 bits (1613), Expect = e-177 Identities = 322/501 (64%), Positives = 380/501 (75%), Gaps = 11/501 (2%) Frame = +1 Query: 82 MDRVDAGTDIAFKIGFSGYSGHLRIEPLPPVERYDPLKSLPDFILPSAFQPETPESIKKH 261 MD ++A +++F++GFSG+SGHLR+EPL VER P++SLPDFILP AF ETPE+IK + Sbjct: 1 MDPIEATKELSFRVGFSGHSGHLRVEPLSTVERSTPIRSLPDFILPPAFPKETPETIKNY 60 Query: 262 WEEKYLLPELDKDEFSVEKSGRQWDFDWFDRAKVHLEPTLPRTVIVPEYELPFKRRKD-- 435 EE YL P LD DEFS EK GRQWDFDWF+ AKV L+P+ PR+V+VP + LPF+R K Sbjct: 61 IEETYLQPRLDPDEFSPEKVGRQWDFDWFEMAKVSLDPSPPRSVVVPTWVLPFERPKKDG 120 Query: 436 -----WEPRSMEMDVSELMEGAHESGSTPRMPGPAKDFVRGSIGNRPFRPGGLDVSQSAQ 600 WEP S ++DVSEL ESGS PR+PGPAKDFVRGSI NRPFRPGGLD SQS Sbjct: 121 AAGGTWEPDSRQVDVSELNVETQESGSQPRVPGPAKDFVRGSINNRPFRPGGLDDSQSID 180 Query: 601 KVVPEGARSGQWVREILDGGSAQVIPPGFKHGLDLGDLMAHPYSWKVYKDQSE--VKSSS 774 +++P+ A +G+WV E+L+GG AQ IPP K GLDLGDL +P SW VY++QS K+S Sbjct: 181 RILPDAASNGEWVHEVLNGGPAQFIPPILKKGLDLGDLKEYPNSWNVYENQSSSSFKTSP 240 Query: 775 DDKLSRISVQFGDLFAKAWEDDIIEESQHRDDAESAKAGIKMEEEGDIPR--NVSDTELK 948 + LS +SVQF DLF KAWE+D IE S + G+ G P+ ++ + Sbjct: 241 IENLSELSVQFDDLFKKAWEEDAIE---------SVEDGVY---SGQSPKAESIKSEDRV 288 Query: 949 KEADLCSSVHDTESLVLDEILSTDTGRSILGSNEISVPGGPQKKEAWAIASGSESIADRF 1128 +E + S LDEILS ++G L S++ + G QKKEAW + G E I+ RF Sbjct: 289 RELEAISIAPAPGISALDEILSLESGGFSLSSDQATEVGA-QKKEAWVVVGGREDISLRF 347 Query: 1129 CELVPDMALEFPFELDTFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRA 1308 +LVPDMAL+FPFELDTFQKEAIY+LEKG+SVFVAAHTSAGKTVVAEYAFALATKHCTRA Sbjct: 348 HDLVPDMALDFPFELDTFQKEAIYHLEKGDSVFVAAHTSAGKTVVAEYAFALATKHCTRA 407 Query: 1309 VYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDI 1488 VYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDI Sbjct: 408 VYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDI 467 Query: 1489 EWVIFDEVHYVNDVERGVVWE 1551 EWVIFDEVHYVND+ERGVVWE Sbjct: 468 EWVIFDEVHYVNDIERGVVWE 488