BLASTX nr result

ID: Coptis21_contig00010755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010755
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q01402.1|NDK2_SPIOL RecName: Full=Nucleoside diphosphate kina...   300   2e-79
ref|XP_002263177.1| PREDICTED: nucleoside diphosphate kinase 2, ...   297   1e-78
ref|XP_002511246.1| nucleoside diphosphate kinase, putative [Ric...   295   6e-78
ref|XP_003525659.1| PREDICTED: nucleoside diphosphate kinase 2, ...   288   7e-76
gb|ACU15565.1| unknown [Glycine max]                                  287   2e-75

>sp|Q01402.1|NDK2_SPIOL RecName: Full=Nucleoside diphosphate kinase 2, chloroplastic;
           AltName: Full=Nucleoside diphosphate kinase II;
           Short=NDK II; Short=NDP kinase II; Short=NDPK II;
           Contains: RecName: Full=Nucleoside diphosphate kinase 2
           high molecular weight; Contains: RecName:
           Full=Nucleoside diphosphate kinase 2 low molecular
           weight; Flags: Precursor gi|218273|dbj|BAA02018.1|
           nucleoside diphosphate kinase II [Spinacia oleracea]
          Length = 233

 Score =  300 bits (769), Expect = 2e-79
 Identities = 151/218 (69%), Positives = 169/218 (77%), Gaps = 8/218 (3%)
 Frame = +3

Query: 96  SLPPRVTSSSIHSHKLVKNNTQQQKHLSA------LFQHTSPLFS--LSKHKYKKPHIFL 251
           SLP   ++++ H + L + N   Q+ L+A      LF    PL S  L + K  KPHIFL
Sbjct: 16  SLPHSSSTTTRHQNLLFRRNNHHQQKLAAFHSQSHLFSTKCPLISHSLPRKKSFKPHIFL 75

Query: 252 PHLVASLEDVEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXXCPKELAEEHYKD 431
           PHLVAS+E VEETYIM+KPDGVQRGLVGEIISRFE             CPKELAEEHYKD
Sbjct: 76  PHLVASMEQVEETYIMIKPDGVQRGLVGEIISRFEKKGFKLIGLKMYPCPKELAEEHYKD 135

Query: 432 LKEKPFFPKLTEYITSGPVVCMAWEGVGVVASARKLIGVTNPLQAEPGTIRGDLAVQTGR 611
           LK K F+ KL +YITSGPVVCMAWEGVGVVAS+RKLIG T+PLQAEPGTIRGDLAVQTGR
Sbjct: 136 LKAKSFYQKLIDYITSGPVVCMAWEGVGVVASSRKLIGATDPLQAEPGTIRGDLAVQTGR 195

Query: 612 NVIHGSDSPENGKREIALWFKEGEVCQWTPAQAPWLRE 725
           NV+HGSDSP+NGKREI LWFKEGE+CQWTPAQAPWLRE
Sbjct: 196 NVVHGSDSPDNGKREIGLWFKEGEICQWTPAQAPWLRE 233


>ref|XP_002263177.1| PREDICTED: nucleoside diphosphate kinase 2, chloroplastic isoform 1
           [Vitis vinifera] gi|297733614|emb|CBI14861.3| unnamed
           protein product [Vitis vinifera]
          Length = 230

 Score =  297 bits (761), Expect = 1e-78
 Identities = 161/244 (65%), Positives = 171/244 (70%), Gaps = 21/244 (8%)
 Frame = +3

Query: 57  MEGVAVLGTARPISLPPRVTSSSIHSHKLVKNNTQQQKHLS-----------------AL 185
           ME  AVLG        P V+SS +HS        Q Q+H S                 A 
Sbjct: 1   MEAAAVLGAR------PSVSSSYLHS--------QTQRHCSLYVVSQKPTLRSDHRRLAA 46

Query: 186 FQHTSPLFSLSKHK----YKKPHIFLPHLVASLEDVEETYIMVKPDGVQRGLVGEIISRF 353
           F   S LFS S  +      KP IFLPHLVAS+E VEETYIMVKPDGVQRGLVGEIISRF
Sbjct: 47  FHSPSNLFSYSPFRPHARSTKPRIFLPHLVASMEQVEETYIMVKPDGVQRGLVGEIISRF 106

Query: 354 EXXXXXXXXXXXXXCPKELAEEHYKDLKEKPFFPKLTEYITSGPVVCMAWEGVGVVASAR 533
           E             CPK+LAEEHYKDLKEK FFPKL EYITSGPVVCMAWEGVGVVASAR
Sbjct: 107 EKKGFKLTGLKLFQCPKQLAEEHYKDLKEKSFFPKLIEYITSGPVVCMAWEGVGVVASAR 166

Query: 534 KLIGVTNPLQAEPGTIRGDLAVQTGRNVIHGSDSPENGKREIALWFKEGEVCQWTPAQAP 713
           KLIG TNPLQAEPGTIRGDLAVQTGRNV+HGSDSPENGKREI+LWFKEGE+C+W P QAP
Sbjct: 167 KLIGSTNPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREISLWFKEGELCEWAPVQAP 226

Query: 714 WLRE 725
           WLRE
Sbjct: 227 WLRE 230


>ref|XP_002511246.1| nucleoside diphosphate kinase, putative [Ricinus communis]
           gi|223550361|gb|EEF51848.1| nucleoside diphosphate
           kinase, putative [Ricinus communis]
          Length = 242

 Score =  295 bits (756), Expect = 6e-78
 Identities = 157/242 (64%), Positives = 171/242 (70%), Gaps = 19/242 (7%)
 Frame = +3

Query: 57  MEGVAVLGTARPISLPPRV------------TSSSIHSHKLVKNNTQQQKHLSA------ 182
           ME V VLG   P      +            TS+S  S+   K    +  HL+A      
Sbjct: 1   MEAVGVLGGGAPCVYSSSILLRSSTDSTTYSTSTSSLSYAQCKKLNLRTSHLAAFHSPSR 60

Query: 183 LFQHT-SPLFSLSKHKYKKPHIFLPHLVASLEDVEETYIMVKPDGVQRGLVGEIISRFEX 359
           LF H+ S  ++       K HIFLPHLVASLE VEETYIMVKPDGVQRGLVGEIISRFE 
Sbjct: 61  LFCHSHSRSYNAKSRNSTKTHIFLPHLVASLEQVEETYIMVKPDGVQRGLVGEIISRFEK 120

Query: 360 XXXXXXXXXXXXCPKELAEEHYKDLKEKPFFPKLTEYITSGPVVCMAWEGVGVVASARKL 539
                       CPKELAEEHYKDLK +PFFPKL +YITSGPVVCMAWEGVGVVASARKL
Sbjct: 121 KGFKLTGLKLFQCPKELAEEHYKDLKARPFFPKLIDYITSGPVVCMAWEGVGVVASARKL 180

Query: 540 IGVTNPLQAEPGTIRGDLAVQTGRNVIHGSDSPENGKREIALWFKEGEVCQWTPAQAPWL 719
           IG T+PLQAEPGTIRGDLAVQTGRNV+HGSDSPENGKRE+ALWFKEGE+CQW PA APWL
Sbjct: 181 IGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREVALWFKEGEICQWPPALAPWL 240

Query: 720 RE 725
           RE
Sbjct: 241 RE 242


>ref|XP_003525659.1| PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Glycine
           max]
          Length = 225

 Score =  288 bits (738), Expect = 7e-76
 Identities = 148/223 (66%), Positives = 165/223 (73%), Gaps = 4/223 (1%)
 Frame = +3

Query: 69  AVLGTARPISLPPRVTSSSIHSHKLVKNNTQQQKHLSALFQHTSPLFSLSK----HKYKK 236
           AV G+    S  PR   S++   +    +       S LF +  P ++ +K        K
Sbjct: 3   AVCGSVWVTSSLPRSPKSTLSLFRSTHQHLTAFPSQSHLFLYHPPPYANAKTLRARTSSK 62

Query: 237 PHIFLPHLVASLEDVEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXXCPKELAE 416
           P IFLPHL+ASLE V++TYIMVKPDGVQRGLVGEIISRFE             C KELAE
Sbjct: 63  PAIFLPHLIASLEQVDQTYIMVKPDGVQRGLVGEIISRFEKKGFKLTGLKLFQCSKELAE 122

Query: 417 EHYKDLKEKPFFPKLTEYITSGPVVCMAWEGVGVVASARKLIGVTNPLQAEPGTIRGDLA 596
           EHYKDLK+K FFPKL +YITSGPVVCMAWEGVGVVASARKLIG T+PLQAEPGTIRGDLA
Sbjct: 123 EHYKDLKQKSFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLA 182

Query: 597 VQTGRNVIHGSDSPENGKREIALWFKEGEVCQWTPAQAPWLRE 725
           VQTGRNV+HGSDSPENGKREIALWFKEGEVC+WTP QAPWLRE
Sbjct: 183 VQTGRNVVHGSDSPENGKREIALWFKEGEVCEWTPVQAPWLRE 225


>gb|ACU15565.1| unknown [Glycine max]
          Length = 229

 Score =  287 bits (735), Expect = 2e-75
 Identities = 147/223 (65%), Positives = 165/223 (73%), Gaps = 4/223 (1%)
 Frame = +3

Query: 69  AVLGTARPISLPPRVTSSSIHSHKLVKNNTQQQKHLSALFQHTSPLFSLSK----HKYKK 236
           AV G+    S  PR   S++   +    +       S LF +  P ++ +K        K
Sbjct: 3   AVCGSVWVTSSLPRSPKSTLSLFRSTHQHLTAFPSQSHLFLYHPPPYANAKTLRARTSSK 62

Query: 237 PHIFLPHLVASLEDVEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXXCPKELAE 416
           P IFLPHL+ASLE V++TYIMVKPDGVQRGLVGEIISRFE             C KELAE
Sbjct: 63  PAIFLPHLIASLEQVDQTYIMVKPDGVQRGLVGEIISRFEKKGFKLTGLKLFQCSKELAE 122

Query: 417 EHYKDLKEKPFFPKLTEYITSGPVVCMAWEGVGVVASARKLIGVTNPLQAEPGTIRGDLA 596
           EHYKDLK+K FFPKL +YITSGPVVCMAWEGVGVVASARKLIG T+PLQAEPGTIRGDLA
Sbjct: 123 EHYKDLKQKSFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLA 182

Query: 597 VQTGRNVIHGSDSPENGKREIALWFKEGEVCQWTPAQAPWLRE 725
           VQTGRNV+HGSDSPENGKREIALWFKEGEVC+WTP QAPWLR+
Sbjct: 183 VQTGRNVVHGSDSPENGKREIALWFKEGEVCEWTPVQAPWLRD 225


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