BLASTX nr result

ID: Coptis21_contig00010751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010751
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139777.1| PREDICTED: ribosome assembly protein 1-like ...   186   2e-45
ref|XP_004139776.1| PREDICTED: ribosome assembly protein 1-like ...   186   2e-45
ref|NP_188938.1| elongation factor EF-2 [Arabidopsis thaliana] g...   180   1e-43
dbj|BAB02089.1| elongation factor EF-2 [Arabidopsis thaliana]         180   1e-43
ref|XP_002885535.1| elongation factor Tu family protein [Arabido...   179   3e-43

>ref|XP_004139777.1| PREDICTED: ribosome assembly protein 1-like isoform 2 [Cucumis
           sativus] gi|449502885|ref|XP_004161770.1| PREDICTED:
           ribosome assembly protein 1-like [Cucumis sativus]
          Length = 1019

 Score =  186 bits (471), Expect = 2e-45
 Identities = 95/115 (82%), Positives = 103/115 (89%)
 Frame = -2

Query: 345 MEEIETRKIRNICILAHVDHGKTTLADHLIAXXXXXXXXLHPKQAGKLRYMDYLDEEQRR 166
           M+++ETR+IRNICILAHVDHGKTTLADHLIA         HPK AG+LR+MDYLDEEQRR
Sbjct: 1   MDDLETRRIRNICILAHVDHGKTTLADHLIAASGGGLI--HPKMAGRLRFMDYLDEEQRR 58

Query: 165 AITMKSSSIGLQYKNCYAINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVH 1
           AITMKSSSIGL+YK  Y+INLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVH
Sbjct: 59  AITMKSSSIGLRYKE-YSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVH 112


>ref|XP_004139776.1| PREDICTED: ribosome assembly protein 1-like isoform 1 [Cucumis
           sativus]
          Length = 1035

 Score =  186 bits (471), Expect = 2e-45
 Identities = 95/115 (82%), Positives = 103/115 (89%)
 Frame = -2

Query: 345 MEEIETRKIRNICILAHVDHGKTTLADHLIAXXXXXXXXLHPKQAGKLRYMDYLDEEQRR 166
           M+++ETR+IRNICILAHVDHGKTTLADHLIA         HPK AG+LR+MDYLDEEQRR
Sbjct: 1   MDDLETRRIRNICILAHVDHGKTTLADHLIAASGGGLI--HPKMAGRLRFMDYLDEEQRR 58

Query: 165 AITMKSSSIGLQYKNCYAINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVH 1
           AITMKSSSIGL+YK  Y+INLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVH
Sbjct: 59  AITMKSSSIGLRYKE-YSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVH 112


>ref|NP_188938.1| elongation factor EF-2 [Arabidopsis thaliana]
           gi|332643181|gb|AEE76702.1| elongation factor EF-2
           [Arabidopsis thaliana]
          Length = 1015

 Score =  180 bits (456), Expect = 1e-43
 Identities = 93/115 (80%), Positives = 101/115 (87%)
 Frame = -2

Query: 345 MEEIETRKIRNICILAHVDHGKTTLADHLIAXXXXXXXXLHPKQAGKLRYMDYLDEEQRR 166
           M+E E RK+RNICILAHVDHGKTTLADHLIA         HP+ AGKLR+MDYLDEEQRR
Sbjct: 1   MDESEGRKVRNICILAHVDHGKTTLADHLIASSGGGVL--HPRLAGKLRFMDYLDEEQRR 58

Query: 165 AITMKSSSIGLQYKNCYAINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVH 1
           AITMKSSSI L+YK+ Y++NLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVH
Sbjct: 59  AITMKSSSISLKYKD-YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVH 112


>dbj|BAB02089.1| elongation factor EF-2 [Arabidopsis thaliana]
          Length = 963

 Score =  180 bits (456), Expect = 1e-43
 Identities = 93/115 (80%), Positives = 101/115 (87%)
 Frame = -2

Query: 345 MEEIETRKIRNICILAHVDHGKTTLADHLIAXXXXXXXXLHPKQAGKLRYMDYLDEEQRR 166
           M+E E RK+RNICILAHVDHGKTTLADHLIA         HP+ AGKLR+MDYLDEEQRR
Sbjct: 1   MDESEGRKVRNICILAHVDHGKTTLADHLIASSGGGVL--HPRLAGKLRFMDYLDEEQRR 58

Query: 165 AITMKSSSIGLQYKNCYAINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVH 1
           AITMKSSSI L+YK+ Y++NLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVH
Sbjct: 59  AITMKSSSISLKYKD-YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVH 112


>ref|XP_002885535.1| elongation factor Tu family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297331375|gb|EFH61794.1| elongation factor Tu
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1015

 Score =  179 bits (453), Expect = 3e-43
 Identities = 92/115 (80%), Positives = 101/115 (87%)
 Frame = -2

Query: 345 MEEIETRKIRNICILAHVDHGKTTLADHLIAXXXXXXXXLHPKQAGKLRYMDYLDEEQRR 166
           M++ E RK+RNICILAHVDHGKTTLADHLIA         HP+ AGKLR+MDYLDEEQRR
Sbjct: 1   MDDSEGRKVRNICILAHVDHGKTTLADHLIASSGGGVL--HPRLAGKLRFMDYLDEEQRR 58

Query: 165 AITMKSSSIGLQYKNCYAINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVH 1
           AITMKSSSI L+YK+ Y++NLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVH
Sbjct: 59  AITMKSSSISLRYKD-YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVH 112


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