BLASTX nr result

ID: Coptis21_contig00010747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010747
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_175672.2| O-fucosyltransferase family protein [Arabidopsi...   181   2e-54
ref|XP_002894391.1| hypothetical protein ARALYDRAFT_474388 [Arab...   181   2e-54
emb|CBI36296.3| unnamed protein product [Vitis vinifera]              172   2e-52
ref|XP_002304147.1| predicted protein [Populus trichocarpa] gi|2...   180   2e-52
ref|XP_002267150.1| PREDICTED: DUF246 domain-containing protein ...   172   2e-51

>ref|NP_175672.2| O-fucosyltransferase family protein [Arabidopsis thaliana]
           gi|18491205|gb|AAL69505.1| unknown protein [Arabidopsis
           thaliana] gi|20465295|gb|AAM20051.1| unknown protein
           [Arabidopsis thaliana] gi|332194710|gb|AEE32831.1|
           O-fucosyltransferase family protein [Arabidopsis
           thaliana]
          Length = 439

 Score =  181 bits (458), Expect(2) = 2e-54
 Identities = 83/102 (81%), Positives = 93/102 (91%)
 Frame = +1

Query: 295 LPKLSNGYIRVDCYGGLNQMRRDLCDGIGVARLLNATLVLPKFEVAAYWNESSGFADVFD 474
           LP  +NGYIRVDCYGGLNQMRRDLCDG+G+ARLLNATLVLPKFEVAAYWNESSGFADVFD
Sbjct: 70  LPAKTNGYIRVDCYGGLNQMRRDLCDGVGIARLLNATLVLPKFEVAAYWNESSGFADVFD 129

Query: 475 VDYFIQEMKNYITVLKTVPEEIALREPVRVDCSKRKGHFDYI 600
           VDYFIQ+M  YI V+K +P++IA +EP +VDCSKRKG FDYI
Sbjct: 130 VDYFIQKMSGYIEVVKELPKDIASKEPFKVDCSKRKGQFDYI 171



 Score = 57.8 bits (138), Expect(2) = 2e-54
 Identities = 22/34 (64%), Positives = 27/34 (79%)
 Frame = +3

Query: 156 PSSSTTTQRKSDIWSVPRLVEWRPCKWWIQGHLT 257
           P  S ++   SDIWSV R++EWRPCKWW+QGHLT
Sbjct: 35  PFPSGSSVGSSDIWSVKRIMEWRPCKWWLQGHLT 68


>ref|XP_002894391.1| hypothetical protein ARALYDRAFT_474388 [Arabidopsis lyrata subsp.
           lyrata] gi|297340233|gb|EFH70650.1| hypothetical protein
           ARALYDRAFT_474388 [Arabidopsis lyrata subsp. lyrata]
          Length = 438

 Score =  181 bits (458), Expect(2) = 2e-54
 Identities = 83/102 (81%), Positives = 93/102 (91%)
 Frame = +1

Query: 295 LPKLSNGYIRVDCYGGLNQMRRDLCDGIGVARLLNATLVLPKFEVAAYWNESSGFADVFD 474
           LP  +NGYIRVDCYGGLNQMRRDLCDG+G+ARLLNATLVLPKFEVAAYWNESSGFADVFD
Sbjct: 69  LPAKTNGYIRVDCYGGLNQMRRDLCDGVGIARLLNATLVLPKFEVAAYWNESSGFADVFD 128

Query: 475 VDYFIQEMKNYITVLKTVPEEIALREPVRVDCSKRKGHFDYI 600
           VDYFIQ+M  YI V+K +P++IA +EP +VDCSKRKG FDYI
Sbjct: 129 VDYFIQKMSGYIEVVKELPKDIASKEPFKVDCSKRKGQFDYI 170



 Score = 57.4 bits (137), Expect(2) = 2e-54
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = +3

Query: 186 SDIWSVPRLVEWRPCKWWIQGHLT 257
           SDIWSV R+VEWRPCKWW+QGHLT
Sbjct: 44  SDIWSVKRIVEWRPCKWWLQGHLT 67


>emb|CBI36296.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  172 bits (436), Expect(2) = 2e-52
 Identities = 83/105 (79%), Positives = 90/105 (85%), Gaps = 3/105 (2%)
 Frame = +1

Query: 295 LPKLSNGYIRVDCYGGLNQMRRDLCDGIGVARLLNATLVLPKFEVAAYWNESSGFADVFD 474
           LP  +NGYIRVDCYGGLNQMRRD CDG+G+ARLLNATLVLPKFEVAAYWNESSGFADVFD
Sbjct: 71  LPAKNNGYIRVDCYGGLNQMRRDFCDGVGIARLLNATLVLPKFEVAAYWNESSGFADVFD 130

Query: 475 VDYFIQEMKNYITVLKTVPEEIALREPVRVDCSK---RKGHFDYI 600
           VDYFIQ+M  Y+ V+K +P EIA REP RVD SK   RKG FDYI
Sbjct: 131 VDYFIQQMDGYVKVVKDLPPEIASREPFRVDTSKRKGRKGQFDYI 175



 Score = 59.3 bits (142), Expect(2) = 2e-52
 Identities = 27/46 (58%), Positives = 30/46 (65%), Gaps = 7/46 (15%)
 Frame = +3

Query: 141 FYFAPPS-------SSTTTQRKSDIWSVPRLVEWRPCKWWIQGHLT 257
           F  +PPS       S T+  RK DIWSV RLVEWRPCKWW+ G LT
Sbjct: 24  FLISPPSPFSQFSLSPTSPSRKFDIWSVRRLVEWRPCKWWLDGDLT 69


>ref|XP_002304147.1| predicted protein [Populus trichocarpa] gi|222841579|gb|EEE79126.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score =  180 bits (457), Expect(2) = 2e-52
 Identities = 83/102 (81%), Positives = 91/102 (89%)
 Frame = +1

Query: 295 LPKLSNGYIRVDCYGGLNQMRRDLCDGIGVARLLNATLVLPKFEVAAYWNESSGFADVFD 474
           LP  SNGYIRVDCYGGLNQMRRD CDG+G+ARLLNATLVLPKFE AAYWNESSGFADVFD
Sbjct: 68  LPAESNGYIRVDCYGGLNQMRRDFCDGVGIARLLNATLVLPKFEAAAYWNESSGFADVFD 127

Query: 475 VDYFIQEMKNYITVLKTVPEEIALREPVRVDCSKRKGHFDYI 600
           VDYFIQ+M  +I V+K +P E+AL+EP RVDCSKRKG FDYI
Sbjct: 128 VDYFIQQMDGFIKVVKELPPEVALKEPFRVDCSKRKGQFDYI 169



 Score = 51.2 bits (121), Expect(2) = 2e-52
 Identities = 22/34 (64%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
 Frame = +3

Query: 156 PSSSTTTQR---KSDIWSVPRLVEWRPCKWWIQG 248
           P SS  + +   KSDIW V RLVEWRPCKWWI G
Sbjct: 30  PFSSVPSNKQAGKSDIWGVKRLVEWRPCKWWIHG 63


>ref|XP_002267150.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
           vinifera]
          Length = 476

 Score =  172 bits (436), Expect(2) = 2e-51
 Identities = 83/105 (79%), Positives = 90/105 (85%), Gaps = 3/105 (2%)
 Frame = +1

Query: 295 LPKLSNGYIRVDCYGGLNQMRRDLCDGIGVARLLNATLVLPKFEVAAYWNESSGFADVFD 474
           LP  +NGYIRVDCYGGLNQMRRD CDG+G+ARLLNATLVLPKFEVAAYWNESSGFADVFD
Sbjct: 104 LPAKNNGYIRVDCYGGLNQMRRDFCDGVGIARLLNATLVLPKFEVAAYWNESSGFADVFD 163

Query: 475 VDYFIQEMKNYITVLKTVPEEIALREPVRVDCSK---RKGHFDYI 600
           VDYFIQ+M  Y+ V+K +P EIA REP RVD SK   RKG FDYI
Sbjct: 164 VDYFIQQMDGYVKVVKDLPPEIASREPFRVDTSKRKGRKGQFDYI 208



 Score = 55.8 bits (133), Expect(2) = 2e-51
 Identities = 22/30 (73%), Positives = 24/30 (80%)
 Frame = +3

Query: 168 TTTQRKSDIWSVPRLVEWRPCKWWIQGHLT 257
           T+  RK DIWSV RLVEWRPCKWW+ G LT
Sbjct: 73  TSRSRKFDIWSVRRLVEWRPCKWWLDGDLT 102


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