BLASTX nr result

ID: Coptis21_contig00010736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010736
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510114.1| conserved hypothetical protein [Ricinus comm...    96   7e-18
ref|XP_002285235.1| PREDICTED: uncharacterized protein LOC100260...    88   1e-15
ref|XP_002299164.1| predicted protein [Populus trichocarpa] gi|2...    80   5e-13
gb|ABK96444.1| unknown [Populus trichocarpa x Populus deltoides]       80   5e-13
ref|XP_002512777.1| conserved hypothetical protein [Ricinus comm...    79   1e-12

>ref|XP_002510114.1| conserved hypothetical protein [Ricinus communis]
           gi|223550815|gb|EEF52301.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
 Frame = -2

Query: 602 MDWWDRINTTLRRLWLGFADRVRIGNRGLKKLSHDIRTCEYEDVHVMWEMLKKTETE--M 429
           M+WWD++   +RR+W G A R+ I  RGL KL HD+R CEYEDV +MWEML++TETE   
Sbjct: 1   MEWWDKVMHPVRRVWKGVALRIGIRKRGLLKLRHDVRACEYEDVRIMWEMLRRTETESAR 60

Query: 428 DVSPAKKRKRPFWNIFMYPHLSRRF 354
              P K +KR FW  F +   S  F
Sbjct: 61  QSQPVKSKKRCFWKCFSWARCSPYF 85


>ref|XP_002285235.1| PREDICTED: uncharacterized protein LOC100260909 [Vitis vinifera]
           gi|302142215|emb|CBI19418.3| unnamed protein product
           [Vitis vinifera]
          Length = 91

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 8/91 (8%)
 Frame = -2

Query: 602 MDWWDRINTTLRRLWLGFADRVRIGNRGLKKLSHDIRTCEYEDVHVMWEMLKKTETEMDV 423
           M+WWD++   +R +W G A R  I   GL KL +D+RTCEY DVHVMWEML  TETE+  
Sbjct: 1   MEWWDKMMFPMRTVWNGVAKRFGIRKTGLLKLRNDVRTCEYRDVHVMWEMLNGTETELGR 60

Query: 422 SPAK----KRKRPFWNIFMY----PHLSRRF 354
           SP +     +KR +W I  +    P+L R F
Sbjct: 61  SPERSTGNSKKRTYWKIIEWAKRAPYLCRSF 91


>ref|XP_002299164.1| predicted protein [Populus trichocarpa] gi|222846422|gb|EEE83969.1|
           predicted protein [Populus trichocarpa]
          Length = 92

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 35/82 (42%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
 Frame = -2

Query: 602 MDWWDRINTTLRRLWLGFADRVRIGNRG--LKKLSHDIRTCEYEDVHVMWEMLKKTETEM 429
           MD W ++   +RR+WL  + RV+    G  L KL +D++TC YEDV VMWE+L+++E+E+
Sbjct: 1   MDLWHKMIFPVRRVWLSVSARVKARKNGANLLKLHNDVQTCGYEDVQVMWEILRRSESEL 60

Query: 428 DVSPAKKRKRPFWNIFMYPHLS 363
             S  K+++RPFW +F++ + S
Sbjct: 61  MASHPKRKQRPFWRVFVWSNHS 82


>gb|ABK96444.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 92

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 35/82 (42%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
 Frame = -2

Query: 602 MDWWDRINTTLRRLWLGFADRVRIGNRG--LKKLSHDIRTCEYEDVHVMWEMLKKTETEM 429
           MD W ++   +RR+WL  + RV+    G  L KL +D++TC YEDV VMWE+L+++E+E+
Sbjct: 1   MDLWHKMIFPVRRVWLSVSARVKARKNGANLLKLHNDVQTCGYEDVQVMWEILRRSESEL 60

Query: 428 DVSPAKKRKRPFWNIFMYPHLS 363
             S  K+++RPFW +F++ + S
Sbjct: 61  MASHPKRKQRPFWRVFVWSNHS 82


>ref|XP_002512777.1| conserved hypothetical protein [Ricinus communis]
           gi|223547788|gb|EEF49280.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 92

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 32/78 (41%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
 Frame = -2

Query: 602 MDWWDRINTTLRRLWLGFADRVRIGNRG--LKKLSHDIRTCEYEDVHVMWEMLKKTETEM 429
           MDWWD++   +R++W   + R++  N G  L KL +D++TC YEDV VMWEML+++E+E 
Sbjct: 1   MDWWDKMIFPVRKVWFAVSSRLKPRNHGAGLLKLRNDVQTCGYEDVQVMWEMLRRSESEQ 60

Query: 428 DVSPAKKRKRPFWNIFMY 375
             + +K+++R FW   ++
Sbjct: 61  IANYSKRKQRSFWRALVW 78


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