BLASTX nr result
ID: Coptis21_contig00010735
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00010735 (1217 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containin... 467 e-129 ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|2... 462 e-127 ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus ... 450 e-124 ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containin... 444 e-122 ref|XP_002892071.1| zinc finger family protein [Arabidopsis lyra... 437 e-120 >ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containing protein 1-like [Vitis vinifera] gi|297745423|emb|CBI40503.3| unnamed protein product [Vitis vinifera] Length = 331 Score = 467 bits (1202), Expect = e-129 Identities = 228/324 (70%), Positives = 256/324 (79%), Gaps = 1/324 (0%) Frame = +3 Query: 78 DSSEPQSSEQVCNFFRKPTKNKNIRKRRTXXXXXXXXXXXSVTINRNKKQPKPDNKLVFS 257 D+ E Q SE VCNFFRKPTKNKNIRKR + +++ KK PKPDNKL FS Sbjct: 14 DTGEKQQSEPVCNFFRKPTKNKNIRKRTHDEDENEDSKTGTSVLHQQKKPPKPDNKLYFS 73 Query: 258 TGPIKKSDPNNEETESKVENSIFQFESSSEIQVQNDSRATAISEIETDYTRDARAIRERM 437 TG +KS + ES+ IFQFESS EIQVQ+DSRATA E ETD++RDARAIRER+ Sbjct: 74 TGSSRKSTMDEPNKESE---PIFQFESSKEIQVQHDSRATATLETETDFSRDARAIRERV 130 Query: 438 LKQAENTLKGKG-GDEKVYKGIHGYTDYKAGFRREQTIASEKAGGSHGPLRASAHIRAST 614 LKQ+++ LKGK DEK+YKGIHGYTDYKAGFRREQT+ASEKAGG+HGPLRASAHIRAS Sbjct: 131 LKQSQDALKGKNKSDEKLYKGIHGYTDYKAGFRREQTVASEKAGGAHGPLRASAHIRASA 190 Query: 615 RFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEREWDEAEKVRKRNLAMGIMX 794 RFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQME+EW+EAEK RKRNLAMG Sbjct: 191 RFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEKEWEEAEKARKRNLAMG--- 247 Query: 795 XXXXXXXXXXXXXXXXXXKLPFACFICREAFVDPVVTKCKHYFCEHCALKHHSKNKRCFV 974 LPFACFICR+ FVDPVVTKCKH+FCEHCAL+HHSKNK+CFV Sbjct: 248 GDDADEGGGGQSDEDDDDALPFACFICRQPFVDPVVTKCKHFFCEHCALRHHSKNKKCFV 307 Query: 975 CNEPTLGIFNTAHEIKKRMAAEGK 1046 CN+PTLG+FNTAHEI+K+MAAE K Sbjct: 308 CNQPTLGMFNTAHEIRKKMAAERK 331 >ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|222861631|gb|EEE99173.1| predicted protein [Populus trichocarpa] Length = 323 Score = 462 bits (1188), Expect = e-127 Identities = 224/323 (69%), Positives = 253/323 (78%), Gaps = 3/323 (0%) Frame = +3 Query: 87 EPQSSEQVCNFFRKPTKNKNIRKRRTXXXXXXXXXXXSVTINRNKKQPKPDNKLVFSTGP 266 EPQ +E VCNFFRKP KNKNIRKR + ++ KK PK DNKL FSTGP Sbjct: 8 EPQQTEAVCNFFRKPMKNKNIRKRMIDEDEDEDSKTQTSLLHSQKKAPKADNKLYFSTGP 67 Query: 267 IKKSDPNNEETESKVENSIFQFESSSEIQVQNDSRATAISEIETDYTRDARAIRERMLKQ 446 +KKS +N E E +FQFESS EIQVQ+DSRATA E ET++++DARAIRER LKQ Sbjct: 68 LKKSSESNAEPE----RLLFQFESSKEIQVQHDSRATATLETETEFSKDARAIRERALKQ 123 Query: 447 AENTLKGK---GGDEKVYKGIHGYTDYKAGFRREQTIASEKAGGSHGPLRASAHIRASTR 617 A++ LKGK GDEK+YKGIHGYTD+KAGFRREQTI+SEKAGGSHGPLRASAHIR S R Sbjct: 124 ADDALKGKKMSSGDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVSAR 183 Query: 618 FDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEREWDEAEKVRKRNLAMGIMXX 797 FDYQPDICKDYKETGYCG+GD+CKFMHDRGDYKSGWQME+EW+EAEK RKRNLA+G+ Sbjct: 184 FDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQMEKEWEEAEKARKRNLALGM--- 240 Query: 798 XXXXXXXXXXXXXXXXXKLPFACFICREAFVDPVVTKCKHYFCEHCALKHHSKNKRCFVC 977 +LPFACFICRE FVDPV+TKCKHYFCEHCALKHH+KNK+CFVC Sbjct: 241 -DDEEVGGAGHDDDDEDELPFACFICRENFVDPVMTKCKHYFCEHCALKHHAKNKKCFVC 299 Query: 978 NEPTLGIFNTAHEIKKRMAAEGK 1046 NEPTLGIFN AHEI+K+MA GK Sbjct: 300 NEPTLGIFNAAHEIRKKMADAGK 322 >ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus communis] gi|223538607|gb|EEF40210.1| RING finger protein 113A, putative [Ricinus communis] Length = 325 Score = 450 bits (1158), Expect = e-124 Identities = 224/331 (67%), Positives = 252/331 (76%), Gaps = 6/331 (1%) Frame = +3 Query: 72 MEDSSEPQSSEQVCNFFRKPTKNKNIRKRRTXXXXXXXXXXXSVTINRN-KKQPKPDNKL 248 M DS + + E VCNFFRKP KNKNIRKR ++ N KK PKPDNKL Sbjct: 1 MADSGQSEQPEPVCNFFRKPLKNKNIRKRTIEKDEEDDNSKTESSLLHNQKKAPKPDNKL 60 Query: 249 VFSTGPIKKSDPNNEETESKVENS--IFQFESSSEIQVQNDSRATAISEIETDYTRDARA 422 FSTGP K S ES VE+ +FQFESS EIQVQ+DSRATA E ET++++DARA Sbjct: 61 YFSTGPSKNS---LSAAESVVESDRPVFQFESSKEIQVQHDSRATATLETETEFSKDARA 117 Query: 423 IRERMLKQAENTLKGK---GGDEKVYKGIHGYTDYKAGFRREQTIASEKAGGSHGPLRAS 593 IRER LKQAE LKGK GD K+YKGIHGYTD+KAGFRREQTI+SEKAGGSHGPLRAS Sbjct: 118 IRERALKQAEEALKGKTLSSGDAKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRAS 177 Query: 594 AHIRASTRFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEREWDEAEKVRKRN 773 AHIR S RFDYQPDICKDYKETGYCG+GD+CKFMHDRGDYKSGWQ+E+EWDEAEK+RKRN Sbjct: 178 AHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEAEKIRKRN 237 Query: 774 LAMGIMXXXXXXXXXXXXXXXXXXXKLPFACFICREAFVDPVVTKCKHYFCEHCALKHHS 953 LA+G + +LPFACFICR+ FVDPV TKCKHYFCEHCALKHH+ Sbjct: 238 LALGEL---EGGTGENEEEDDDDEHELPFACFICRQPFVDPVTTKCKHYFCEHCALKHHA 294 Query: 954 KNKRCFVCNEPTLGIFNTAHEIKKRMAAEGK 1046 KNK+CFVCN+PTLGIFNTAHEI+K MA + K Sbjct: 295 KNKKCFVCNQPTLGIFNTAHEIRKMMAEDHK 325 >ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like [Cucumis sativus] Length = 322 Score = 444 bits (1142), Expect = e-122 Identities = 218/324 (67%), Positives = 243/324 (75%), Gaps = 3/324 (0%) Frame = +3 Query: 72 MEDSSEPQSSEQVCNFFRKPTKNKNIRKRRTXXXXXXXXXXXSVTINRNKKQPKPDNKLV 251 M D+ + Q SEQVC+FFRKPTKNKNIRKR + + KK PK ++KL Sbjct: 1 MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60 Query: 252 FSTGPIKKSDPNNEETESKVENSIFQFESSSEIQVQNDSRATAISEIETDYTRDARAIRE 431 FS+GP K S N E IFQFESS EIQV +DSRATA E ETD++RDARAIRE Sbjct: 61 FSSGPSKNSSSNESNVEPN--KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRE 118 Query: 432 RMLKQAENTLKGKG---GDEKVYKGIHGYTDYKAGFRREQTIASEKAGGSHGPLRASAHI 602 R+LKQAE LKGKG G EK+YKG++ Y DYKAGFRRE TI+SEKAGG+HGPLRASAHI Sbjct: 119 RVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHI 178 Query: 603 RASTRFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEREWDEAEKVRKRNLAM 782 RAS RFDYQPDICKDYKETGYCG+GDACKFMHDRGDYKSGWQ+E+EW+E EK RKR LA Sbjct: 179 RASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLA- 237 Query: 783 GIMXXXXXXXXXXXXXXXXXXXKLPFACFICREAFVDPVVTKCKHYFCEHCALKHHSKNK 962 M LPFACFICRE FVDPVVTKCKHYFCEHCALKHH+KNK Sbjct: 238 --MKSDDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNK 295 Query: 963 RCFVCNEPTLGIFNTAHEIKKRMA 1034 +CFVCN+PTLGIFNTAHEI+KRMA Sbjct: 296 KCFVCNQPTLGIFNTAHEIRKRMA 319 >ref|XP_002892071.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297337913|gb|EFH68330.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] Length = 342 Score = 437 bits (1123), Expect = e-120 Identities = 214/326 (65%), Positives = 245/326 (75%), Gaps = 4/326 (1%) Frame = +3 Query: 75 EDSSEPQSSEQVCNFFRKPTKNKNIRKRRTXXXXXXXXXXXSVTINRN-KKQPKPDNKLV 251 + + E S+QVC FF+KPTK+KNIRKR +I +N KK KPD+KL Sbjct: 18 QPAGEETKSQQVCTFFKKPTKSKNIRKRAIDADEEDGDSKSESSILQNLKKVAKPDSKLY 77 Query: 252 FSTGPIKKSDPNNEETESKVENSIFQFESSSEIQVQNDSRATAISEIETDYTRDARAIRE 431 FS+GP K S T E +F ++SS EIQVQNDSRATA E ETD+ +DARAIRE Sbjct: 78 FSSGPAKSST-----TSEAAERPVFHYDSSKEIQVQNDSRATATLETETDFNQDARAIRE 132 Query: 432 RMLKQAENTLKG---KGGDEKVYKGIHGYTDYKAGFRREQTIASEKAGGSHGPLRASAHI 602 R+LK+A+ LKG K DEK+YKGIHGYTD+KAGFRREQTI+SEKAGGSHGPLRASAHI Sbjct: 133 RVLKKADEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHI 192 Query: 603 RASTRFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEREWDEAEKVRKRNLAM 782 R S RFDYQPDICKDYKETGYCG+GD+CKF+HDRGDYK GWQ+E+EW+EAEKVRKRN AM Sbjct: 193 RVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAM 252 Query: 783 GIMXXXXXXXXXXXXXXXXXXXKLPFACFICREAFVDPVVTKCKHYFCEHCALKHHSKNK 962 G+ LPFACFICRE FVDPVVTKCKHYFCEHCALKHH+KNK Sbjct: 253 GV----EDEDDEADNDSDEDENALPFACFICREPFVDPVVTKCKHYFCEHCALKHHTKNK 308 Query: 963 RCFVCNEPTLGIFNTAHEIKKRMAAE 1040 +CFVCN+PT+GIFN AHEIKKRMA E Sbjct: 309 KCFVCNQPTMGIFNAAHEIKKRMAEE 334