BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010735
         (1217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containin...   467   e-129
ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|2...   462   e-127
ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus ...   450   e-124
ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containin...   444   e-122
ref|XP_002892071.1| zinc finger family protein [Arabidopsis lyra...   437   e-120

>ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containing protein 1-like [Vitis
            vinifera] gi|297745423|emb|CBI40503.3| unnamed protein
            product [Vitis vinifera]
          Length = 331

 Score =  467 bits (1202), Expect = e-129
 Identities = 228/324 (70%), Positives = 256/324 (79%), Gaps = 1/324 (0%)
 Frame = +3

Query: 78   DSSEPQSSEQVCNFFRKPTKNKNIRKRRTXXXXXXXXXXXSVTINRNKKQPKPDNKLVFS 257
            D+ E Q SE VCNFFRKPTKNKNIRKR             +  +++ KK PKPDNKL FS
Sbjct: 14   DTGEKQQSEPVCNFFRKPTKNKNIRKRTHDEDENEDSKTGTSVLHQQKKPPKPDNKLYFS 73

Query: 258  TGPIKKSDPNNEETESKVENSIFQFESSSEIQVQNDSRATAISEIETDYTRDARAIRERM 437
            TG  +KS  +    ES+    IFQFESS EIQVQ+DSRATA  E ETD++RDARAIRER+
Sbjct: 74   TGSSRKSTMDEPNKESE---PIFQFESSKEIQVQHDSRATATLETETDFSRDARAIRERV 130

Query: 438  LKQAENTLKGKG-GDEKVYKGIHGYTDYKAGFRREQTIASEKAGGSHGPLRASAHIRAST 614
            LKQ+++ LKGK   DEK+YKGIHGYTDYKAGFRREQT+ASEKAGG+HGPLRASAHIRAS 
Sbjct: 131  LKQSQDALKGKNKSDEKLYKGIHGYTDYKAGFRREQTVASEKAGGAHGPLRASAHIRASA 190

Query: 615  RFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEREWDEAEKVRKRNLAMGIMX 794
            RFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQME+EW+EAEK RKRNLAMG   
Sbjct: 191  RFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEKEWEEAEKARKRNLAMG--- 247

Query: 795  XXXXXXXXXXXXXXXXXXKLPFACFICREAFVDPVVTKCKHYFCEHCALKHHSKNKRCFV 974
                               LPFACFICR+ FVDPVVTKCKH+FCEHCAL+HHSKNK+CFV
Sbjct: 248  GDDADEGGGGQSDEDDDDALPFACFICRQPFVDPVVTKCKHFFCEHCALRHHSKNKKCFV 307

Query: 975  CNEPTLGIFNTAHEIKKRMAAEGK 1046
            CN+PTLG+FNTAHEI+K+MAAE K
Sbjct: 308  CNQPTLGMFNTAHEIRKKMAAERK 331


>ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|222861631|gb|EEE99173.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  462 bits (1188), Expect = e-127
 Identities = 224/323 (69%), Positives = 253/323 (78%), Gaps = 3/323 (0%)
 Frame = +3

Query: 87   EPQSSEQVCNFFRKPTKNKNIRKRRTXXXXXXXXXXXSVTINRNKKQPKPDNKLVFSTGP 266
            EPQ +E VCNFFRKP KNKNIRKR             +  ++  KK PK DNKL FSTGP
Sbjct: 8    EPQQTEAVCNFFRKPMKNKNIRKRMIDEDEDEDSKTQTSLLHSQKKAPKADNKLYFSTGP 67

Query: 267  IKKSDPNNEETESKVENSIFQFESSSEIQVQNDSRATAISEIETDYTRDARAIRERMLKQ 446
            +KKS  +N E E      +FQFESS EIQVQ+DSRATA  E ET++++DARAIRER LKQ
Sbjct: 68   LKKSSESNAEPE----RLLFQFESSKEIQVQHDSRATATLETETEFSKDARAIRERALKQ 123

Query: 447  AENTLKGK---GGDEKVYKGIHGYTDYKAGFRREQTIASEKAGGSHGPLRASAHIRASTR 617
            A++ LKGK    GDEK+YKGIHGYTD+KAGFRREQTI+SEKAGGSHGPLRASAHIR S R
Sbjct: 124  ADDALKGKKMSSGDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVSAR 183

Query: 618  FDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEREWDEAEKVRKRNLAMGIMXX 797
            FDYQPDICKDYKETGYCG+GD+CKFMHDRGDYKSGWQME+EW+EAEK RKRNLA+G+   
Sbjct: 184  FDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQMEKEWEEAEKARKRNLALGM--- 240

Query: 798  XXXXXXXXXXXXXXXXXKLPFACFICREAFVDPVVTKCKHYFCEHCALKHHSKNKRCFVC 977
                             +LPFACFICRE FVDPV+TKCKHYFCEHCALKHH+KNK+CFVC
Sbjct: 241  -DDEEVGGAGHDDDDEDELPFACFICRENFVDPVMTKCKHYFCEHCALKHHAKNKKCFVC 299

Query: 978  NEPTLGIFNTAHEIKKRMAAEGK 1046
            NEPTLGIFN AHEI+K+MA  GK
Sbjct: 300  NEPTLGIFNAAHEIRKKMADAGK 322


>ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus communis]
            gi|223538607|gb|EEF40210.1| RING finger protein 113A,
            putative [Ricinus communis]
          Length = 325

 Score =  450 bits (1158), Expect = e-124
 Identities = 224/331 (67%), Positives = 252/331 (76%), Gaps = 6/331 (1%)
 Frame = +3

Query: 72   MEDSSEPQSSEQVCNFFRKPTKNKNIRKRRTXXXXXXXXXXXSVTINRN-KKQPKPDNKL 248
            M DS + +  E VCNFFRKP KNKNIRKR               ++  N KK PKPDNKL
Sbjct: 1    MADSGQSEQPEPVCNFFRKPLKNKNIRKRTIEKDEEDDNSKTESSLLHNQKKAPKPDNKL 60

Query: 249  VFSTGPIKKSDPNNEETESKVENS--IFQFESSSEIQVQNDSRATAISEIETDYTRDARA 422
             FSTGP K S       ES VE+   +FQFESS EIQVQ+DSRATA  E ET++++DARA
Sbjct: 61   YFSTGPSKNS---LSAAESVVESDRPVFQFESSKEIQVQHDSRATATLETETEFSKDARA 117

Query: 423  IRERMLKQAENTLKGK---GGDEKVYKGIHGYTDYKAGFRREQTIASEKAGGSHGPLRAS 593
            IRER LKQAE  LKGK    GD K+YKGIHGYTD+KAGFRREQTI+SEKAGGSHGPLRAS
Sbjct: 118  IRERALKQAEEALKGKTLSSGDAKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRAS 177

Query: 594  AHIRASTRFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEREWDEAEKVRKRN 773
            AHIR S RFDYQPDICKDYKETGYCG+GD+CKFMHDRGDYKSGWQ+E+EWDEAEK+RKRN
Sbjct: 178  AHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEAEKIRKRN 237

Query: 774  LAMGIMXXXXXXXXXXXXXXXXXXXKLPFACFICREAFVDPVVTKCKHYFCEHCALKHHS 953
            LA+G +                   +LPFACFICR+ FVDPV TKCKHYFCEHCALKHH+
Sbjct: 238  LALGEL---EGGTGENEEEDDDDEHELPFACFICRQPFVDPVTTKCKHYFCEHCALKHHA 294

Query: 954  KNKRCFVCNEPTLGIFNTAHEIKKRMAAEGK 1046
            KNK+CFVCN+PTLGIFNTAHEI+K MA + K
Sbjct: 295  KNKKCFVCNQPTLGIFNTAHEIRKMMAEDHK 325


>ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like [Cucumis
            sativus]
          Length = 322

 Score =  444 bits (1142), Expect = e-122
 Identities = 218/324 (67%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
 Frame = +3

Query: 72   MEDSSEPQSSEQVCNFFRKPTKNKNIRKRRTXXXXXXXXXXXSVTINRNKKQPKPDNKLV 251
            M D+ + Q SEQVC+FFRKPTKNKNIRKR             +  +   KK PK ++KL 
Sbjct: 1    MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 252  FSTGPIKKSDPNNEETESKVENSIFQFESSSEIQVQNDSRATAISEIETDYTRDARAIRE 431
            FS+GP K S  N    E      IFQFESS EIQV +DSRATA  E ETD++RDARAIRE
Sbjct: 61   FSSGPSKNSSSNESNVEPN--KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRE 118

Query: 432  RMLKQAENTLKGKG---GDEKVYKGIHGYTDYKAGFRREQTIASEKAGGSHGPLRASAHI 602
            R+LKQAE  LKGKG   G EK+YKG++ Y DYKAGFRRE TI+SEKAGG+HGPLRASAHI
Sbjct: 119  RVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHI 178

Query: 603  RASTRFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEREWDEAEKVRKRNLAM 782
            RAS RFDYQPDICKDYKETGYCG+GDACKFMHDRGDYKSGWQ+E+EW+E EK RKR LA 
Sbjct: 179  RASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLA- 237

Query: 783  GIMXXXXXXXXXXXXXXXXXXXKLPFACFICREAFVDPVVTKCKHYFCEHCALKHHSKNK 962
              M                    LPFACFICRE FVDPVVTKCKHYFCEHCALKHH+KNK
Sbjct: 238  --MKSDDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNK 295

Query: 963  RCFVCNEPTLGIFNTAHEIKKRMA 1034
            +CFVCN+PTLGIFNTAHEI+KRMA
Sbjct: 296  KCFVCNQPTLGIFNTAHEIRKRMA 319


>ref|XP_002892071.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297337913|gb|EFH68330.1| zinc finger family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score =  437 bits (1123), Expect = e-120
 Identities = 214/326 (65%), Positives = 245/326 (75%), Gaps = 4/326 (1%)
 Frame = +3

Query: 75   EDSSEPQSSEQVCNFFRKPTKNKNIRKRRTXXXXXXXXXXXSVTINRN-KKQPKPDNKLV 251
            + + E   S+QVC FF+KPTK+KNIRKR               +I +N KK  KPD+KL 
Sbjct: 18   QPAGEETKSQQVCTFFKKPTKSKNIRKRAIDADEEDGDSKSESSILQNLKKVAKPDSKLY 77

Query: 252  FSTGPIKKSDPNNEETESKVENSIFQFESSSEIQVQNDSRATAISEIETDYTRDARAIRE 431
            FS+GP K S      T    E  +F ++SS EIQVQNDSRATA  E ETD+ +DARAIRE
Sbjct: 78   FSSGPAKSST-----TSEAAERPVFHYDSSKEIQVQNDSRATATLETETDFNQDARAIRE 132

Query: 432  RMLKQAENTLKG---KGGDEKVYKGIHGYTDYKAGFRREQTIASEKAGGSHGPLRASAHI 602
            R+LK+A+  LKG   K  DEK+YKGIHGYTD+KAGFRREQTI+SEKAGGSHGPLRASAHI
Sbjct: 133  RVLKKADEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHI 192

Query: 603  RASTRFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEREWDEAEKVRKRNLAM 782
            R S RFDYQPDICKDYKETGYCG+GD+CKF+HDRGDYK GWQ+E+EW+EAEKVRKRN AM
Sbjct: 193  RVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAM 252

Query: 783  GIMXXXXXXXXXXXXXXXXXXXKLPFACFICREAFVDPVVTKCKHYFCEHCALKHHSKNK 962
            G+                     LPFACFICRE FVDPVVTKCKHYFCEHCALKHH+KNK
Sbjct: 253  GV----EDEDDEADNDSDEDENALPFACFICREPFVDPVVTKCKHYFCEHCALKHHTKNK 308

Query: 963  RCFVCNEPTLGIFNTAHEIKKRMAAE 1040
            +CFVCN+PT+GIFN AHEIKKRMA E
Sbjct: 309  KCFVCNQPTMGIFNAAHEIKKRMAEE 334