BLASTX nr result
ID: Coptis21_contig00010725
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00010725 (1448 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003588355.1| Mitochondrial protein, putative [Medicago tr... 152 3e-90 gb|AFK37255.1| unknown [Medicago truncatula] 100 8e-29 gb|AFK45797.1| unknown [Lotus japonicus] 100 3e-28 ref|XP_002330403.1| predicted protein [Populus trichocarpa] gi|2... 100 7e-22 gb|ADI17229.1| hypothetical protein [uncultured alpha proteobact... 79 4e-12 >ref|XP_003588355.1| Mitochondrial protein, putative [Medicago truncatula] gi|355477403|gb|AES58606.1| Mitochondrial protein, putative [Medicago truncatula] Length = 1106 Score = 152 bits (384), Expect(4) = 3e-90 Identities = 72/81 (88%), Positives = 73/81 (90%) Frame = +2 Query: 1064 FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQGYHLLWPD 1243 FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQG HLLWPD Sbjct: 886 FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQGSHLLWPD 945 Query: 1244 LPTFSQLQFTARVGFEAVACC 1306 LPTFSQLQFTA F+ C Sbjct: 946 LPTFSQLQFTA--PFKCAGAC 964 Score = 139 bits (349), Expect(4) = 3e-90 Identities = 66/68 (97%), Positives = 67/68 (98%) Frame = +1 Query: 610 IRSFPGVGKAKWGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPH 789 + SFPGVGKAKWGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPH Sbjct: 800 LSSFPGVGKAKWGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPH 859 Query: 790 TWVRSSKA 813 TWVRSSKA Sbjct: 860 TWVRSSKA 867 Score = 65.1 bits (157), Expect(4) = 3e-90 Identities = 25/27 (92%), Positives = 26/27 (96%) Frame = +3 Query: 1308 CWFFHHPIHNKSNETWRKRSEHFAEEQ 1388 CWFFHHPIHNKSNETWRKRSEHFA E+ Sbjct: 964 CWFFHHPIHNKSNETWRKRSEHFAAEE 990 Score = 46.2 bits (108), Expect(4) = 3e-90 Identities = 21/26 (80%), Positives = 21/26 (80%), Gaps = 4/26 (15%) Frame = +3 Query: 888 HLW----KAPTPNGLSRCSHFLADPS 953 H W KAPTPNGLSRCSHFLADPS Sbjct: 859 HTWVRSSKAPTPNGLSRCSHFLADPS 884 Score = 135 bits (339), Expect = 3e-29 Identities = 81/140 (57%), Positives = 82/140 (58%) Frame = +2 Query: 65 RSSNSLQQTGMVQ*SKQLRHFRVPIGRQPXXXXXXXXXXXXXXXXXXKPSTGRRSCFSQD 244 R S G V+ SKQLRHFRVPIGRQP KPSTGRRSCFSQD Sbjct: 693 RQSRRATGPGRVRKSKQLRHFRVPIGRQPFRGFLRDRLTLRRLTERRKPSTGRRSCFSQD 752 Query: 245 FSLLMSAFSLLISPGVVTKNLPRLTERPATDT*KSSFQGLVASVNHLSPDTFSVPWS*TS 424 SLLMSAFSLLISPGVVTKNLPRLTERP TS Sbjct: 753 LSLLMSAFSLLISPGVVTKNLPRLTERP------------------------------TS 782 Query: 425 ELLRFLQRMAASKPTSWLSS 484 ELLRFLQRMAASKPTSWLSS Sbjct: 783 ELLRFLQRMAASKPTSWLSS 802 >gb|AFK37255.1| unknown [Medicago truncatula] Length = 69 Score = 99.8 bits (247), Expect(2) = 8e-29 Identities = 45/45 (100%), Positives = 45/45 (100%) Frame = -1 Query: 482 MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC 348 MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC Sbjct: 1 MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC 45 Score = 55.5 bits (132), Expect(2) = 8e-29 Identities = 24/24 (100%), Positives = 24/24 (100%) Frame = -2 Query: 343 SSVSSGTFCQSGKVFGDNTWRYQK 272 SSVSSGTFCQSGKVFGDNTWRYQK Sbjct: 46 SSVSSGTFCQSGKVFGDNTWRYQK 69 >gb|AFK45797.1| unknown [Lotus japonicus] Length = 69 Score = 99.8 bits (247), Expect(2) = 3e-28 Identities = 45/45 (100%), Positives = 45/45 (100%) Frame = -1 Query: 482 MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC 348 MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC Sbjct: 1 MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC 45 Score = 53.5 bits (127), Expect(2) = 3e-28 Identities = 23/24 (95%), Positives = 23/24 (95%) Frame = -2 Query: 343 SSVSSGTFCQSGKVFGDNTWRYQK 272 SSVSSGTFCQSGKVFGDNTWRY K Sbjct: 46 SSVSSGTFCQSGKVFGDNTWRYHK 69 >ref|XP_002330403.1| predicted protein [Populus trichocarpa] gi|222871788|gb|EEF08919.1| predicted protein [Populus trichocarpa] Length = 95 Score = 100 bits (250), Expect(2) = 7e-22 Identities = 53/77 (68%), Positives = 57/77 (74%) Frame = -3 Query: 354 KLLFQVSVAGRSVNRGRFLVTTPGDIRSENADMSNEKSCEKHDRLPVEGFXXXXXXXXXX 175 KLLFQVSVA VN GRFLVT PGDI+SENAD+SNEKSCEKH+RLPVEGF Sbjct: 19 KLLFQVSVARCFVNWGRFLVTRPGDIKSENADISNEKSCEKHNRLPVEGFLCSVNLRRVN 78 Query: 174 XXXXNPRKGCRPMGTRK 124 NPRKGCR MGT+K Sbjct: 79 RPLRNPRKGCRLMGTQK 95 Score = 30.8 bits (68), Expect(2) = 7e-22 Identities = 14/14 (100%), Positives = 14/14 (100%) Frame = -2 Query: 391 RAQVIHRSDETLKA 350 RAQVIHRSDETLKA Sbjct: 5 RAQVIHRSDETLKA 18 >gb|ADI17229.1| hypothetical protein [uncultured alpha proteobacterium HF0070_14E07] Length = 139 Score = 78.6 bits (192), Expect = 4e-12 Identities = 45/95 (47%), Positives = 57/95 (60%) Frame = +3 Query: 222 GDRVFHRISRYSCQHSHF*YLQVLSPKTFPD*QNVPLLTLEKAAFKVSSLR*IT*ALIHF 401 G+ V H + RYSCQHSHF YLQ S TF +N PL ++ + +S+ ++ Sbjct: 47 GESVSHTLCRYSCQHSHFRYLQHPSQDTFTGLRNAPLPCVKDTSS--ASVYGLSPDTSSA 104 Query: 402 RCHGARPVSYYAFFKGWLLPSPPPGCHRSITSFST 506 + +RPVSYYAFFKGWLL S PPGC TSF T Sbjct: 105 QAGLSRPVSYYAFFKGWLLLSQPPGCLGLPTSFPT 139