BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010725
         (1448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588355.1| Mitochondrial protein, putative [Medicago tr...   152   3e-90
gb|AFK37255.1| unknown [Medicago truncatula]                          100   8e-29
gb|AFK45797.1| unknown [Lotus japonicus]                              100   3e-28
ref|XP_002330403.1| predicted protein [Populus trichocarpa] gi|2...   100   7e-22
gb|ADI17229.1| hypothetical protein [uncultured alpha proteobact...    79   4e-12

>ref|XP_003588355.1| Mitochondrial protein, putative [Medicago truncatula]
            gi|355477403|gb|AES58606.1| Mitochondrial protein,
            putative [Medicago truncatula]
          Length = 1106

 Score =  152 bits (384), Expect(4) = 3e-90
 Identities = 72/81 (88%), Positives = 73/81 (90%)
 Frame = +2

Query: 1064 FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQGYHLLWPD 1243
            FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQG HLLWPD
Sbjct: 886  FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQGSHLLWPD 945

Query: 1244 LPTFSQLQFTARVGFEAVACC 1306
            LPTFSQLQFTA   F+    C
Sbjct: 946  LPTFSQLQFTA--PFKCAGAC 964



 Score =  139 bits (349), Expect(4) = 3e-90
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = +1

Query: 610  IRSFPGVGKAKWGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPH 789
            + SFPGVGKAKWGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPH
Sbjct: 800  LSSFPGVGKAKWGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPH 859

Query: 790  TWVRSSKA 813
            TWVRSSKA
Sbjct: 860  TWVRSSKA 867



 Score = 65.1 bits (157), Expect(4) = 3e-90
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +3

Query: 1308 CWFFHHPIHNKSNETWRKRSEHFAEEQ 1388
            CWFFHHPIHNKSNETWRKRSEHFA E+
Sbjct: 964  CWFFHHPIHNKSNETWRKRSEHFAAEE 990



 Score = 46.2 bits (108), Expect(4) = 3e-90
 Identities = 21/26 (80%), Positives = 21/26 (80%), Gaps = 4/26 (15%)
 Frame = +3

Query: 888 HLW----KAPTPNGLSRCSHFLADPS 953
           H W    KAPTPNGLSRCSHFLADPS
Sbjct: 859 HTWVRSSKAPTPNGLSRCSHFLADPS 884



 Score =  135 bits (339), Expect = 3e-29
 Identities = 81/140 (57%), Positives = 82/140 (58%)
 Frame = +2

Query: 65   RSSNSLQQTGMVQ*SKQLRHFRVPIGRQPXXXXXXXXXXXXXXXXXXKPSTGRRSCFSQD 244
            R S      G V+ SKQLRHFRVPIGRQP                  KPSTGRRSCFSQD
Sbjct: 693  RQSRRATGPGRVRKSKQLRHFRVPIGRQPFRGFLRDRLTLRRLTERRKPSTGRRSCFSQD 752

Query: 245  FSLLMSAFSLLISPGVVTKNLPRLTERPATDT*KSSFQGLVASVNHLSPDTFSVPWS*TS 424
             SLLMSAFSLLISPGVVTKNLPRLTERP                              TS
Sbjct: 753  LSLLMSAFSLLISPGVVTKNLPRLTERP------------------------------TS 782

Query: 425  ELLRFLQRMAASKPTSWLSS 484
            ELLRFLQRMAASKPTSWLSS
Sbjct: 783  ELLRFLQRMAASKPTSWLSS 802


>gb|AFK37255.1| unknown [Medicago truncatula]
          Length = 69

 Score = 99.8 bits (247), Expect(2) = 8e-29
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = -1

Query: 482 MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC 348
           MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC
Sbjct: 1   MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC 45



 Score = 55.5 bits (132), Expect(2) = 8e-29
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = -2

Query: 343 SSVSSGTFCQSGKVFGDNTWRYQK 272
           SSVSSGTFCQSGKVFGDNTWRYQK
Sbjct: 46  SSVSSGTFCQSGKVFGDNTWRYQK 69


>gb|AFK45797.1| unknown [Lotus japonicus]
          Length = 69

 Score = 99.8 bits (247), Expect(2) = 3e-28
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = -1

Query: 482 MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC 348
           MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC
Sbjct: 1   MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC 45



 Score = 53.5 bits (127), Expect(2) = 3e-28
 Identities = 23/24 (95%), Positives = 23/24 (95%)
 Frame = -2

Query: 343 SSVSSGTFCQSGKVFGDNTWRYQK 272
           SSVSSGTFCQSGKVFGDNTWRY K
Sbjct: 46  SSVSSGTFCQSGKVFGDNTWRYHK 69


>ref|XP_002330403.1| predicted protein [Populus trichocarpa] gi|222871788|gb|EEF08919.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score =  100 bits (250), Expect(2) = 7e-22
 Identities = 53/77 (68%), Positives = 57/77 (74%)
 Frame = -3

Query: 354 KLLFQVSVAGRSVNRGRFLVTTPGDIRSENADMSNEKSCEKHDRLPVEGFXXXXXXXXXX 175
           KLLFQVSVA   VN GRFLVT PGDI+SENAD+SNEKSCEKH+RLPVEGF          
Sbjct: 19  KLLFQVSVARCFVNWGRFLVTRPGDIKSENADISNEKSCEKHNRLPVEGFLCSVNLRRVN 78

Query: 174 XXXXNPRKGCRPMGTRK 124
               NPRKGCR MGT+K
Sbjct: 79  RPLRNPRKGCRLMGTQK 95



 Score = 30.8 bits (68), Expect(2) = 7e-22
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 391 RAQVIHRSDETLKA 350
           RAQVIHRSDETLKA
Sbjct: 5   RAQVIHRSDETLKA 18


>gb|ADI17229.1| hypothetical protein [uncultured alpha proteobacterium
           HF0070_14E07]
          Length = 139

 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 45/95 (47%), Positives = 57/95 (60%)
 Frame = +3

Query: 222 GDRVFHRISRYSCQHSHF*YLQVLSPKTFPD*QNVPLLTLEKAAFKVSSLR*IT*ALIHF 401
           G+ V H + RYSCQHSHF YLQ  S  TF   +N PL  ++  +   +S+  ++      
Sbjct: 47  GESVSHTLCRYSCQHSHFRYLQHPSQDTFTGLRNAPLPCVKDTSS--ASVYGLSPDTSSA 104

Query: 402 RCHGARPVSYYAFFKGWLLPSPPPGCHRSITSFST 506
           +   +RPVSYYAFFKGWLL S PPGC    TSF T
Sbjct: 105 QAGLSRPVSYYAFFKGWLLLSQPPGCLGLPTSFPT 139