BLASTX nr result

ID: Coptis21_contig00010721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010721
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADK70231.1| chloroplast iron superoxide dismutase, partial [D...   377   e-102
gb|ADK70232.2| chloroplast iron superoxide dismutase [Dimocarpus...   374   e-101
ref|XP_002520915.1| superoxide dismutase [fe], putative [Ricinus...   371   e-100
emb|CBI28995.3| unnamed protein product [Vitis vinifera]              368   e-100
ref|XP_002267399.1| PREDICTED: superoxide dismutase [Fe], chloro...   368   e-100

>gb|ADK70231.1| chloroplast iron superoxide dismutase, partial [Dimocarpus longan]
          Length = 250

 Score =  377 bits (967), Expect = e-102
 Identities = 174/227 (76%), Positives = 196/227 (86%)
 Frame = +2

Query: 8   KLSTPPRPKLVASYGLTTPPYKLDALEPYMSRKTLELHWGEHHRNYVEGXXXXXXXXXXX 187
           K  TPPR K+VA YGL TPPYKLDALEPYMS++TLE+HWGEHHR YV+G           
Sbjct: 25  KRQTPPR-KVVAYYGLKTPPYKLDALEPYMSKRTLEMHWGEHHRGYVDGLNKQLEKSDLL 83

Query: 188 YGCTMDELVRVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGKIPGEGVLQQIEKDFGS 367
           YG TMDELV+VTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGG +P  G+L QIEKDFGS
Sbjct: 84  YGYTMDELVKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGDMPRFGLLDQIEKDFGS 143

Query: 368 FTNFKEKFVEAAFTLFGSGWVWLVLKPEEKKLAVVKTSNAVNPIVWGDIPIISLDMWEHA 547
           F+NF+E F+EAA TLFGSGWVWL LK EE++L V+KTSNA+NP+VW DIPIISLDMWEHA
Sbjct: 144 FSNFRENFIEAALTLFGSGWVWLALKREERRLEVMKTSNAINPLVWDDIPIISLDMWEHA 203

Query: 548 YHVDYKNDKGKYVNVFMNNLVSWHAATTRMARAEAFVNLGEPNIPVA 688
           Y++DY NDK KYVNVFMN+LVSW+AA +RMARAEAFVNLGEPNIP+A
Sbjct: 204 YYLDYNNDKAKYVNVFMNHLVSWNAAMSRMARAEAFVNLGEPNIPIA 250


>gb|ADK70232.2| chloroplast iron superoxide dismutase [Dimocarpus longan]
           gi|345018992|gb|ADK70233.2| chloroplast iron superoxide
           dismutase [Dimocarpus longan]
           gi|345018994|gb|ADK70234.2| chloroplast iron superoxide
           dismutase [Dimocarpus longan]
           gi|345018998|gb|ADK70236.2| chloroplast iron superoxide
           dismutase [Dimocarpus longan]
          Length = 250

 Score =  374 bits (961), Expect = e-101
 Identities = 173/227 (76%), Positives = 195/227 (85%)
 Frame = +2

Query: 8   KLSTPPRPKLVASYGLTTPPYKLDALEPYMSRKTLELHWGEHHRNYVEGXXXXXXXXXXX 187
           K  TPPR K+VA YGL TPPYKLDALEPYMS++TLE+HWGEHHR YV+G           
Sbjct: 25  KRQTPPR-KVVAYYGLKTPPYKLDALEPYMSKRTLEMHWGEHHRGYVDGLNKQLEKSDLL 83

Query: 188 YGCTMDELVRVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGKIPGEGVLQQIEKDFGS 367
           YG TMDELV+VTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGG +P  G+L QIEKDFGS
Sbjct: 84  YGYTMDELVKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGDMPRFGLLDQIEKDFGS 143

Query: 368 FTNFKEKFVEAAFTLFGSGWVWLVLKPEEKKLAVVKTSNAVNPIVWGDIPIISLDMWEHA 547
           F+NF+E F+EAA TLFGSGWVWL LK EE++L V+KTSNA+NP+VW DIPIISLDMWEHA
Sbjct: 144 FSNFRENFIEAALTLFGSGWVWLALKREERRLEVMKTSNAINPLVWDDIPIISLDMWEHA 203

Query: 548 YHVDYKNDKGKYVNVFMNNLVSWHAATTRMARAEAFVNLGEPNIPVA 688
           Y++DY NDK KYVNVFMN+LVSW+AA +RMARAEAFVNLGEP IP+A
Sbjct: 204 YYLDYNNDKAKYVNVFMNHLVSWNAAMSRMARAEAFVNLGEPKIPIA 250


>ref|XP_002520915.1| superoxide dismutase [fe], putative [Ricinus communis]
           gi|223539881|gb|EEF41460.1| superoxide dismutase [fe],
           putative [Ricinus communis]
          Length = 265

 Score =  371 bits (953), Expect = e-100
 Identities = 171/219 (78%), Positives = 188/219 (85%)
 Frame = +2

Query: 32  KLVASYGLTTPPYKLDALEPYMSRKTLELHWGEHHRNYVEGXXXXXXXXXXXYGCTMDEL 211
           KLVA YGL TPPY LDALEPYMSRKTLE+HWGEHHR YVEG           YG TMDEL
Sbjct: 47  KLVAYYGLKTPPYPLDALEPYMSRKTLEIHWGEHHRAYVEGLNKQLAKDDILYGYTMDEL 106

Query: 212 VRVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGKIPGEGVLQQIEKDFGSFTNFKEKF 391
           V+VTYNNGNP PEFNNAAQVWNHDFFWESMQP GG++P  GVLQQIEKDFGSFTNFKEKF
Sbjct: 107 VKVTYNNGNPFPEFNNAAQVWNHDFFWESMQPAGGEMPELGVLQQIEKDFGSFTNFKEKF 166

Query: 392 VEAAFTLFGSGWVWLVLKPEEKKLAVVKTSNAVNPIVWGDIPIISLDMWEHAYHVDYKND 571
           +E A TLFGSGW+WLVLK EE++LA++KTSNA NP+VW DIPII LDMWEHAY++DYKND
Sbjct: 167 IEEALTLFGSGWIWLVLKREERQLAIIKTSNANNPLVWDDIPIICLDMWEHAYYLDYKND 226

Query: 572 KGKYVNVFMNNLVSWHAATTRMARAEAFVNLGEPNIPVA 688
           +GKYVN FMN+L+SW+A   RMARAEAFVNLGEP IPVA
Sbjct: 227 RGKYVNAFMNHLISWNAVMARMARAEAFVNLGEPKIPVA 265


>emb|CBI28995.3| unnamed protein product [Vitis vinifera]
          Length = 321

 Score =  368 bits (945), Expect = e-100
 Identities = 170/219 (77%), Positives = 190/219 (86%)
 Frame = +2

Query: 32  KLVASYGLTTPPYKLDALEPYMSRKTLELHWGEHHRNYVEGXXXXXXXXXXXYGCTMDEL 211
           K++A YGL  PPYKLDALEP+MSR+TLE+HWG+HHR YVEG           YG T+DEL
Sbjct: 103 KVLAFYGLKAPPYKLDALEPHMSRRTLEMHWGDHHRGYVEGLNKQLEKDDILYGHTLDEL 162

Query: 212 VRVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGKIPGEGVLQQIEKDFGSFTNFKEKF 391
           V+VTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGG +P  G+L+QIEKDFGSFTNFKEKF
Sbjct: 163 VKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGDMPRLGLLEQIEKDFGSFTNFKEKF 222

Query: 392 VEAAFTLFGSGWVWLVLKPEEKKLAVVKTSNAVNPIVWGDIPIISLDMWEHAYHVDYKND 571
           +EAA TLFGSGWVWLVLK  E+ LAVVKTSNA+NPIVW DIPIISLD+WEHAY++DYKND
Sbjct: 223 LEAALTLFGSGWVWLVLKRNERCLAVVKTSNAINPIVWDDIPIISLDVWEHAYYLDYKND 282

Query: 572 KGKYVNVFMNNLVSWHAATTRMARAEAFVNLGEPNIPVA 688
           KGKY  VFMN+LVSW+AA  RMARAEAFVNLGEP IP+A
Sbjct: 283 KGKYATVFMNHLVSWNAAAARMARAEAFVNLGEPKIPIA 321


>ref|XP_002267399.1| PREDICTED: superoxide dismutase [Fe], chloroplastic [Vitis
           vinifera]
          Length = 264

 Score =  368 bits (945), Expect = e-100
 Identities = 170/219 (77%), Positives = 190/219 (86%)
 Frame = +2

Query: 32  KLVASYGLTTPPYKLDALEPYMSRKTLELHWGEHHRNYVEGXXXXXXXXXXXYGCTMDEL 211
           K++A YGL  PPYKLDALEP+MSR+TLE+HWG+HHR YVEG           YG T+DEL
Sbjct: 46  KVLAFYGLKAPPYKLDALEPHMSRRTLEMHWGDHHRGYVEGLNKQLEKDDILYGHTLDEL 105

Query: 212 VRVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGKIPGEGVLQQIEKDFGSFTNFKEKF 391
           V+VTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGG +P  G+L+QIEKDFGSFTNFKEKF
Sbjct: 106 VKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGDMPRLGLLEQIEKDFGSFTNFKEKF 165

Query: 392 VEAAFTLFGSGWVWLVLKPEEKKLAVVKTSNAVNPIVWGDIPIISLDMWEHAYHVDYKND 571
           +EAA TLFGSGWVWLVLK  E+ LAVVKTSNA+NPIVW DIPIISLD+WEHAY++DYKND
Sbjct: 166 LEAALTLFGSGWVWLVLKRNERCLAVVKTSNAINPIVWDDIPIISLDVWEHAYYLDYKND 225

Query: 572 KGKYVNVFMNNLVSWHAATTRMARAEAFVNLGEPNIPVA 688
           KGKY  VFMN+LVSW+AA  RMARAEAFVNLGEP IP+A
Sbjct: 226 KGKYATVFMNHLVSWNAAAARMARAEAFVNLGEPKIPIA 264


Top