BLASTX nr result
ID: Coptis21_contig00010720
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00010720 (804 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002311407.1| predicted protein [Populus trichocarpa] gi|1... 268 1e-69 dbj|BAJ53160.1| JHL10I11.6 [Jatropha curcas] 259 5e-67 ref|XP_002269703.1| PREDICTED: H/ACA ribonucleoprotein complex s... 259 5e-67 gb|AFK48249.1| unknown [Lotus japonicus] 256 5e-66 ref|XP_002512015.1| H/ACA ribonucleoprotein complex subunit, put... 255 9e-66 >ref|XP_002311407.1| predicted protein [Populus trichocarpa] gi|118483385|gb|ABK93593.1| unknown [Populus trichocarpa] gi|118485555|gb|ABK94629.1| unknown [Populus trichocarpa] gi|222851227|gb|EEE88774.1| predicted protein [Populus trichocarpa] Length = 155 Score = 268 bits (684), Expect = 1e-69 Identities = 132/155 (85%), Positives = 148/155 (95%) Frame = +3 Query: 105 MGSDSEAEKSSQKERKKITALAPIATPLAGKKLCKKTLKLVRKAAESKCLKRGVKEVVKS 284 MGSDSE E+S+ KE+KKIT+LAPIA PLAGKKLCK+TLKLVRKA+ESKCLKRGVKEVVKS Sbjct: 1 MGSDSETERSNIKEKKKITSLAPIAKPLAGKKLCKRTLKLVRKASESKCLKRGVKEVVKS 60 Query: 285 IRRGNKGLCIIAGNISPIDVITHVPILCEEAGIPYIYVPSKEDLATAGSTKRPTCCVLVL 464 IRRG+KGLCIIAGNISPIDVITHVPILCEE+ IPY+YV SKEDLA+AG+TKRPTCCVLVL Sbjct: 61 IRRGHKGLCIIAGNISPIDVITHVPILCEESDIPYVYVTSKEDLASAGATKRPTCCVLVL 120 Query: 465 TKPTKGEMGEEEQEKLKADYGQVVSDVTELTISLY 569 TKPTKGE+G+E+QEKLKADY QVVSDV+ELT SL+ Sbjct: 121 TKPTKGEIGKEDQEKLKADYDQVVSDVSELTSSLF 155 >dbj|BAJ53160.1| JHL10I11.6 [Jatropha curcas] Length = 155 Score = 259 bits (662), Expect = 5e-67 Identities = 128/155 (82%), Positives = 144/155 (92%) Frame = +3 Query: 105 MGSDSEAEKSSQKERKKITALAPIATPLAGKKLCKKTLKLVRKAAESKCLKRGVKEVVKS 284 MGSDSEAEKS ++E+KK+ AL+PIA PLAGKKL KKTLKLVRKAAE KCLKRGVKEVVKS Sbjct: 1 MGSDSEAEKSQKQEKKKVIALSPIAKPLAGKKLSKKTLKLVRKAAEHKCLKRGVKEVVKS 60 Query: 285 IRRGNKGLCIIAGNISPIDVITHVPILCEEAGIPYIYVPSKEDLATAGSTKRPTCCVLVL 464 IRRG+KGLC+IAGNISPIDVITHVPILCEE+ IPYIYV SKEDLA AG+TKRPTCCVLVL Sbjct: 61 IRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVSSKEDLANAGATKRPTCCVLVL 120 Query: 465 TKPTKGEMGEEEQEKLKADYGQVVSDVTELTISLY 569 TKP KG++G+EEQEKLKAD+ QVV+DV+ELT SL+ Sbjct: 121 TKPPKGDIGQEEQEKLKADFSQVVADVSELTSSLF 155 >ref|XP_002269703.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein [Vitis vinifera] gi|147867156|emb|CAN80504.1| hypothetical protein VITISV_035185 [Vitis vinifera] gi|297734127|emb|CBI15374.3| unnamed protein product [Vitis vinifera] Length = 157 Score = 259 bits (662), Expect = 5e-67 Identities = 127/157 (80%), Positives = 146/157 (92%), Gaps = 2/157 (1%) Frame = +3 Query: 105 MGSDSEAEKSS--QKERKKITALAPIATPLAGKKLCKKTLKLVRKAAESKCLKRGVKEVV 278 MGSDSEAE+S+ +KE+KK++ALAPIA PLAGKKLCK+TLKL+R+AAE KCLKRGVKEVV Sbjct: 1 MGSDSEAERSAHKEKEKKKLSALAPIAKPLAGKKLCKRTLKLIRRAAEHKCLKRGVKEVV 60 Query: 279 KSIRRGNKGLCIIAGNISPIDVITHVPILCEEAGIPYIYVPSKEDLATAGSTKRPTCCVL 458 K IRRG+KG C+IAGNI+PIDVITHVPILCEEA IPY+YVPSKEDLA AGSTKRPTCCVL Sbjct: 61 KGIRRGDKGFCVIAGNITPIDVITHVPILCEEADIPYVYVPSKEDLANAGSTKRPTCCVL 120 Query: 459 VLTKPTKGEMGEEEQEKLKADYGQVVSDVTELTISLY 569 VLTKPTKGE+G+EEQEKLKA+Y QVVSDV+ LT +L+ Sbjct: 121 VLTKPTKGELGQEEQEKLKAEYTQVVSDVSGLTSTLF 157 >gb|AFK48249.1| unknown [Lotus japonicus] Length = 157 Score = 256 bits (653), Expect = 5e-66 Identities = 127/157 (80%), Positives = 143/157 (91%), Gaps = 2/157 (1%) Frame = +3 Query: 105 MGSDSEAEKSSQKE--RKKITALAPIATPLAGKKLCKKTLKLVRKAAESKCLKRGVKEVV 278 MGSDSE EKS QKE RKK+ A+APIA PLAGKKLCK+TLKLVR+AAE KCLKRGVKEVV Sbjct: 1 MGSDSEGEKSVQKEKERKKLLAVAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVV 60 Query: 279 KSIRRGNKGLCIIAGNISPIDVITHVPILCEEAGIPYIYVPSKEDLATAGSTKRPTCCVL 458 KSIRRG+KGLC+IAGNISPIDVITHVP+LCEE+ +PY+YV SKEDLA+AG+TKRPTCCVL Sbjct: 61 KSIRRGHKGLCVIAGNISPIDVITHVPVLCEESDVPYVYVTSKEDLASAGATKRPTCCVL 120 Query: 459 VLTKPTKGEMGEEEQEKLKADYGQVVSDVTELTISLY 569 VLTKP KGEM + EQEKLK+DY QVVSDVTE+T SL+ Sbjct: 121 VLTKPAKGEMEKGEQEKLKSDYDQVVSDVTEITASLF 157 >ref|XP_002512015.1| H/ACA ribonucleoprotein complex subunit, putative [Ricinus communis] gi|223549195|gb|EEF50684.1| H/ACA ribonucleoprotein complex subunit, putative [Ricinus communis] Length = 157 Score = 255 bits (651), Expect = 9e-66 Identities = 128/157 (81%), Positives = 142/157 (90%), Gaps = 2/157 (1%) Frame = +3 Query: 105 MGSDSEAEKSS--QKERKKITALAPIATPLAGKKLCKKTLKLVRKAAESKCLKRGVKEVV 278 MGSDSEAE+S +KE+KKI AL+PIA PLAGKKLCK+TLKLVRKAAE KCLKRGVKEVV Sbjct: 1 MGSDSEAERSHKHEKEKKKIIALSPIAKPLAGKKLCKRTLKLVRKAAEHKCLKRGVKEVV 60 Query: 279 KSIRRGNKGLCIIAGNISPIDVITHVPILCEEAGIPYIYVPSKEDLATAGSTKRPTCCVL 458 KSIRRG+KGLC+IAGNISPIDVITHVPILCEEA IPY+YVPSKEDLA AG TKRPTCCVL Sbjct: 61 KSIRRGHKGLCVIAGNISPIDVITHVPILCEEADIPYVYVPSKEDLANAGVTKRPTCCVL 120 Query: 459 VLTKPTKGEMGEEEQEKLKADYGQVVSDVTELTISLY 569 VLTKP KGE+ +EEQEKLKAD+ QV +DV+EL SL+ Sbjct: 121 VLTKPPKGEIPQEEQEKLKADFSQVAADVSELASSLF 157