BLASTX nr result
ID: Coptis21_contig00010719
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00010719 (883 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285325.1| PREDICTED: photosystem II core complex prote... 188 1e-45 ref|XP_002315645.1| hypothetical protein POPTRDRAFT_726168 [Popu... 183 4e-44 gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides] 180 3e-43 gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides] 180 3e-43 ref|XP_002312650.1| predicted protein [Populus trichocarpa] gi|2... 169 8e-40 >ref|XP_002285325.1| PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Vitis vinifera] Length = 201 Score = 188 bits (478), Expect = 1e-45 Identities = 111/201 (55%), Positives = 137/201 (68%), Gaps = 5/201 (2%) Frame = +3 Query: 102 MASTIATTAMLSAKCVSSSTSPNRVHSSRPTIKPVSVLPLQALQKVSTTSKSSENFNLS- 278 MA+TIAT AML+AKC+S + SP ++ S+PT KP+S+L +Q L K TT KSSEN NLS Sbjct: 1 MAATIATMAMLNAKCLSIN-SPKNLNLSKPTAKPISLLSIQNLPKGLTTLKSSENQNLST 59 Query: 279 SLTGTALAGAVFSTLSSCHPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXXYNILQPAL 458 SL GTA+AGA+FSTLSSC PA AAQQIA+IA+GDNRG +NILQPAL Sbjct: 60 SLAGTAIAGAIFSTLSSCDPALAAQQIAEIADGDNRGLALLLPIIPAIAWVLFNILQPAL 119 Query: 459 NQINKMNSTKGVIVXXXXXXXA---YVSAPTASASEVAMIAE-ASSDNRGXXXXXXXXXX 626 NQ+NKM STKGVI+ A ++ P ASASE+A +A+ ASSDNRG Sbjct: 120 NQLNKMRSTKGVIIGLGLGGLAASGFMLTPHASASEIATLADAASSDNRGQLLLFVVTPA 179 Query: 627 XXXXXFNILQPALNQIDRMKS 689 +NILQPALNQ++RM+S Sbjct: 180 ILWVLYNILQPALNQLNRMRS 200 >ref|XP_002315645.1| hypothetical protein POPTRDRAFT_726168 [Populus trichocarpa] gi|118489255|gb|ABK96433.1| unknown [Populus trichocarpa x Populus deltoides] gi|222864685|gb|EEF01816.1| hypothetical protein POPTRDRAFT_726168 [Populus trichocarpa] Length = 196 Score = 183 bits (465), Expect = 4e-44 Identities = 104/199 (52%), Positives = 136/199 (68%), Gaps = 3/199 (1%) Frame = +3 Query: 102 MASTIATTAMLSAKCVSSSTSPNRVHSSRPTIKPVSVLPLQALQKVSTTSKSSENFNLSS 281 MA+T+AT A+L+AKC+S +++ N + ++P+ KPVS+L +Q L K T SK ++N + Sbjct: 1 MAATMATMAILNAKCLSINSNKN-ISPTKPSTKPVSLLSMQNLPKGLTISKPADN---TV 56 Query: 282 LTGTALAGAVFSTLSSCHPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXXYNILQPALN 461 LTGTA+AGA+F+TLSSC PAFAAQQIA+IAEGDNRG +NILQPALN Sbjct: 57 LTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALN 116 Query: 462 QINKMNSTKGVIVXXXXXXXA---YVSAPTASASEVAMIAEASSDNRGXXXXXXXXXXXX 632 QIN+M TKGVIV A ++S P ASASE+AMIA+A+SDNRG Sbjct: 117 QINRMRQTKGVIVGLGLGGLAASGFISTPHASASEIAMIADATSDNRGTLLLIVVAPAIL 176 Query: 633 XXXFNILQPALNQIDRMKS 689 +NILQPALNQI++M+S Sbjct: 177 WVLYNILQPALNQINKMRS 195 >gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides] Length = 196 Score = 180 bits (457), Expect = 3e-43 Identities = 104/199 (52%), Positives = 133/199 (66%), Gaps = 3/199 (1%) Frame = +3 Query: 102 MASTIATTAMLSAKCVSSSTSPNRVHSSRPTIKPVSVLPLQALQKVSTTSKSSENFNLSS 281 MA+T+AT A+L+AKC+S ++ N + +P+ KPVS+L + L K T SK ++N + Sbjct: 1 MAATMATMAILNAKCLSINSIKN-ISPPKPSTKPVSLLSMLNLPKGLTISKPADN---TV 56 Query: 282 LTGTALAGAVFSTLSSCHPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXXYNILQPALN 461 LTGTA+AGA+F+TLSSC PAFAAQQIA+IAEGDNRG +NILQPALN Sbjct: 57 LTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALN 116 Query: 462 QINKMNSTKGVIVXXXXXXXA---YVSAPTASASEVAMIAEASSDNRGXXXXXXXXXXXX 632 QIN+M TKGVIV A ++S P ASASE+AMIAEA+SDNRG Sbjct: 117 QINRMRQTKGVIVGLGLGGLAASGFISTPDASASEIAMIAEATSDNRGTLLLIVVAPAIL 176 Query: 633 XXXFNILQPALNQIDRMKS 689 +NILQPALNQI++M+S Sbjct: 177 WVLYNILQPALNQINKMRS 195 >gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides] Length = 196 Score = 180 bits (457), Expect = 3e-43 Identities = 104/199 (52%), Positives = 133/199 (66%), Gaps = 3/199 (1%) Frame = +3 Query: 102 MASTIATTAMLSAKCVSSSTSPNRVHSSRPTIKPVSVLPLQALQKVSTTSKSSENFNLSS 281 MA+T+AT A+L+AKC+S ++ N + +P+ KPVS+L + L K T SK ++N + Sbjct: 1 MAATMATMAILNAKCLSINSIKN-ISPPKPSTKPVSLLSMLNLPKGLTISKPADN---TV 56 Query: 282 LTGTALAGAVFSTLSSCHPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXXYNILQPALN 461 LTGTA+AGA+F+TLSSC PAFAAQQIA+IAEGDNRG +NILQPALN Sbjct: 57 LTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALN 116 Query: 462 QINKMNSTKGVIVXXXXXXXA---YVSAPTASASEVAMIAEASSDNRGXXXXXXXXXXXX 632 QIN+M TKGVIV A ++S P ASASE+AMIAEA+SDNRG Sbjct: 117 QINRMRQTKGVIVGLGLGGLAASGFISTPDASASEIAMIAEAASDNRGTLLLIVVAPAIL 176 Query: 633 XXXFNILQPALNQIDRMKS 689 +NILQPALNQI++M+S Sbjct: 177 WVLYNILQPALNQINKMRS 195 >ref|XP_002312650.1| predicted protein [Populus trichocarpa] gi|222852470|gb|EEE90017.1| predicted protein [Populus trichocarpa] Length = 192 Score = 169 bits (428), Expect = 8e-40 Identities = 96/194 (49%), Positives = 127/194 (65%), Gaps = 3/194 (1%) Frame = +3 Query: 117 ATTAMLSAKCVSSSTSPNRVHSSRPTIKPVSVLPLQALQKVSTTSKSSENFNLSSLTGTA 296 AT A+L+AKC+S + + N + +P KP+ +L +Q L K T SK ++N ++L GTA Sbjct: 3 ATMAILNAKCLSINANKN-TNPIKPPTKPIYLLAMQNLPKGLTISKPADN---TALAGTA 58 Query: 297 LAGAVFSTLSSCHPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXXYNILQPALNQINKM 476 +AGA+F+TLSSC PAFAAQQIA+IAEGDNRG +NILQPALNQ+N+M Sbjct: 59 IAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALNQVNRM 118 Query: 477 NSTKGVIVXXXXXXXA---YVSAPTASASEVAMIAEASSDNRGXXXXXXXXXXXXXXXFN 647 T+GVI+ A ++S P ASASE+AMIAEA+SD+RG +N Sbjct: 119 RETRGVIIGLGLGGLAASGFMSTPDASASEIAMIAEATSDSRGTLLLLVVAPAILWVLYN 178 Query: 648 ILQPALNQIDRMKS 689 ILQPALNQI+RM+S Sbjct: 179 ILQPALNQINRMRS 192