BLASTX nr result

ID: Coptis21_contig00010698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010698
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40170.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_002266808.1| PREDICTED: myrcene synthase, chloroplastic [...   133   2e-29
ref|XP_002267019.2| PREDICTED: myrcene synthase, chloroplastic-l...   132   3e-29
emb|CBI40171.3| unnamed protein product [Vitis vinifera]              132   3e-29
ref|XP_002334026.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28

>emb|CBI40170.3| unnamed protein product [Vitis vinifera]
          Length = 201

 Score =  133 bits (334), Expect = 2e-29
 Identities = 67/129 (51%), Positives = 85/129 (65%), Gaps = 4/129 (3%)
 Frame = +1

Query: 1   WVKLCKAYFMEAKWVQQRYTPTTKEYFDNGIQSVAVPLIIINCYFLTAKTITEEALERVE 180
           W  LCK+Y +EAKW   RYTPT +EY  N   S++ P I+++ +F     ITE+ALE VE
Sbjct: 21  WADLCKSYLLEAKWYHARYTPTLQEYLSNAWISISAPTILVHAFFFVTNPITEDALECVE 80

Query: 181 LLDSLIYLPSMVLRLGDDLLTSTDEQNRG----SKQCYMDELGVSEEGAREHIRQLICDN 348
              ++I   S++LRL DDL TS+DE  RG    S QCYM E G SEE AREHI+ LI + 
Sbjct: 81  QYCNIIRWSSIILRLSDDLGTSSDELKRGDVPKSIQCYMHETGASEEDAREHIKCLIGET 140

Query: 349 WKKMNKARV 375
           WKKMN+ RV
Sbjct: 141 WKKMNEDRV 149


>ref|XP_002266808.1| PREDICTED: myrcene synthase, chloroplastic [Vitis vinifera]
          Length = 590

 Score =  133 bits (334), Expect = 2e-29
 Identities = 67/129 (51%), Positives = 85/129 (65%), Gaps = 4/129 (3%)
 Frame = +1

Query: 1   WVKLCKAYFMEAKWVQQRYTPTTKEYFDNGIQSVAVPLIIINCYFLTAKTITEEALERVE 180
           W  LCK+Y +EAKW   RYTPT +EY  N   S++ P I+++ +F     ITE+ALE VE
Sbjct: 410 WADLCKSYLLEAKWYHARYTPTLQEYLSNAWISISAPTILVHAFFFVTNPITEDALECVE 469

Query: 181 LLDSLIYLPSMVLRLGDDLLTSTDEQNRG----SKQCYMDELGVSEEGAREHIRQLICDN 348
              ++I   S++LRL DDL TS+DE  RG    S QCYM E G SEE AREHI+ LI + 
Sbjct: 470 QYCNIIRWSSIILRLSDDLGTSSDELKRGDVPKSIQCYMHETGASEEDAREHIKCLIGET 529

Query: 349 WKKMNKARV 375
           WKKMN+ RV
Sbjct: 530 WKKMNEDRV 538


>ref|XP_002267019.2| PREDICTED: myrcene synthase, chloroplastic-like [Vitis vinifera]
          Length = 849

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/129 (51%), Positives = 85/129 (65%), Gaps = 4/129 (3%)
 Frame = +1

Query: 1    WVKLCKAYFMEAKWVQQRYTPTTKEYFDNGIQSVAVPLIIINCYFLTAKTITEEALERVE 180
            W  LCK+Y +EAKW   RYTPT KEY  N   S++ P+I+++ +F     ITE+ALE +E
Sbjct: 669  WADLCKSYLLEAKWYHARYTPTLKEYLSNAWISISAPVILVHAFFFVTNPITEDALECLE 728

Query: 181  LLDSLIYLPSMVLRLGDDLLTSTDEQNRG----SKQCYMDELGVSEEGAREHIRQLICDN 348
               ++I   S++LRL DDL TS+DE  RG    S QCYM E G  EE AREHI+ LI + 
Sbjct: 729  QYCNIIRWSSIILRLSDDLGTSSDELKRGDVPKSIQCYMHETGACEEDAREHIKCLIGET 788

Query: 349  WKKMNKARV 375
            WKKMN+ RV
Sbjct: 789  WKKMNEDRV 797


>emb|CBI40171.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/129 (51%), Positives = 85/129 (65%), Gaps = 4/129 (3%)
 Frame = +1

Query: 1   WVKLCKAYFMEAKWVQQRYTPTTKEYFDNGIQSVAVPLIIINCYFLTAKTITEEALERVE 180
           W  LCK+Y +EAKW   RYTPT KEY  N   S++ P+I+++ +F     ITE+ALE +E
Sbjct: 167 WADLCKSYLLEAKWYHARYTPTLKEYLSNAWISISAPVILVHAFFFVTNPITEDALECLE 226

Query: 181 LLDSLIYLPSMVLRLGDDLLTSTDEQNRG----SKQCYMDELGVSEEGAREHIRQLICDN 348
              ++I   S++LRL DDL TS+DE  RG    S QCYM E G  EE AREHI+ LI + 
Sbjct: 227 QYCNIIRWSSIILRLSDDLGTSSDELKRGDVPKSIQCYMHETGACEEDAREHIKCLIGET 286

Query: 349 WKKMNKARV 375
           WKKMN+ RV
Sbjct: 287 WKKMNEDRV 295


>ref|XP_002334026.1| predicted protein [Populus trichocarpa] gi|222839590|gb|EEE77927.1|
           predicted protein [Populus trichocarpa]
          Length = 589

 Score =  130 bits (326), Expect = 1e-28
 Identities = 66/125 (52%), Positives = 82/125 (65%), Gaps = 4/125 (3%)
 Frame = +1

Query: 1   WVKLCKAYFMEAKWVQQRYTPTTKEYFDNGIQSVAVPLIIINCYFLTAKTITEEALERVE 180
           W  LCK+Y +EAKW    YTPT +EY DN   S++ P+I+++ YF  +   TEEA + +E
Sbjct: 412 WADLCKSYLLEAKWYFSGYTPTLQEYMDNAWISISAPVILVHAYFYVSNPTTEEASQFME 471

Query: 181 LLDSLIYLPSMVLRLGDDLLTSTDEQNRG----SKQCYMDELGVSEEGAREHIRQLICDN 348
               +I   SM+LRL DDL TSTDE  RG    S QCYM E GVSEE AREHIR LI + 
Sbjct: 472 EYPDIIRWSSMILRLADDLGTSTDELKRGDISKSIQCYMHEAGVSEEKAREHIRNLIENT 531

Query: 349 WKKMN 363
           WKK+N
Sbjct: 532 WKKIN 536


Top