BLASTX nr result

ID: Coptis21_contig00010695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010695
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634566.1| PREDICTED: protein phosphatase 1 regulatory ...    86   8e-15
ref|XP_002309933.1| predicted protein [Populus trichocarpa] gi|2...    82   8e-14
ref|XP_002306268.1| predicted protein [Populus trichocarpa] gi|2...    81   2e-13
ref|XP_002516330.1| expressed protein, putative [Ricinus communi...    79   5e-13
ref|XP_002879318.1| hypothetical protein ARALYDRAFT_902160 [Arab...    77   4e-12

>ref|XP_003634566.1| PREDICTED: protein phosphatase 1 regulatory subunit 11-like [Vitis
           vinifera]
          Length = 124

 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 49/72 (68%), Positives = 53/72 (73%), Gaps = 11/72 (15%)
 Frame = +1

Query: 91  RPTSSSNT--ATITLENPSP---------QQQQTLVLRLSQPLSLKKKVSWKEGTVDNEF 237
           RP SSS+T   T+TLENPSP         QQQ TLVLRL+     KKKV+WKEGTVDNEF
Sbjct: 12  RPPSSSSTITTTLTLENPSPSQPQQPQQQQQQTTLVLRLNP----KKKVTWKEGTVDNEF 67

Query: 238 LQRKSSKKCCIF 273
           LQRKSSKKCCIF
Sbjct: 68  LQRKSSKKCCIF 79


>ref|XP_002309933.1| predicted protein [Populus trichocarpa] gi|222852836|gb|EEE90383.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 40/61 (65%), Positives = 47/61 (77%)
 Frame = +1

Query: 91  RPTSSSNTATITLENPSPQQQQTLVLRLSQPLSLKKKVSWKEGTVDNEFLQRKSSKKCCI 270
           RP   ++  T  LENP+ QQ QTL LRL++P   KKKVSWKEGTVDNEF+Q+KSSK CCI
Sbjct: 15  RPPPPASATTTILENPTQQQPQTLTLRLNRP---KKKVSWKEGTVDNEFMQKKSSKICCI 71

Query: 271 F 273
           F
Sbjct: 72  F 72


>ref|XP_002306268.1| predicted protein [Populus trichocarpa] gi|222855717|gb|EEE93264.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 43/63 (68%), Positives = 49/63 (77%)
 Frame = +1

Query: 85  MARPTSSSNTATITLENPSPQQQQTLVLRLSQPLSLKKKVSWKEGTVDNEFLQRKSSKKC 264
           M  P SSS T T  LEN + QQQQTL LRL++P   KKKVSWKEGTVDNE++Q+KSSK C
Sbjct: 11  MRTPPSSSTTTTF-LENLTRQQQQTLTLRLNRP---KKKVSWKEGTVDNEYMQKKSSKIC 66

Query: 265 CIF 273
           CIF
Sbjct: 67  CIF 69


>ref|XP_002516330.1| expressed protein, putative [Ricinus communis]
           gi|223544560|gb|EEF46077.1| expressed protein, putative
           [Ricinus communis]
          Length = 124

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 41/70 (58%), Positives = 55/70 (78%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  SICQMARPTSSSNTATITLENPSPQQQQ---TLVLRLSQPLSLKKKVSWKEGTVDNEFLQ 243
           +I  ++ P++ + TAT+T+EN + QQQQ   TLVLRL +    +KKV+WKEGTVDNEF+Q
Sbjct: 14  AIRPLSTPSAGTVTATVTVENNNRQQQQPPQTLVLRLKRK---EKKVTWKEGTVDNEFMQ 70

Query: 244 RKSSKKCCIF 273
           +KSSKKCCIF
Sbjct: 71  KKSSKKCCIF 80


>ref|XP_002879318.1| hypothetical protein ARALYDRAFT_902160 [Arabidopsis lyrata subsp.
           lyrata] gi|297325157|gb|EFH55577.1| hypothetical protein
           ARALYDRAFT_902160 [Arabidopsis lyrata subsp. lyrata]
          Length = 108

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 42/63 (66%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
 Frame = +1

Query: 91  RPTSSSNTATITLENPSPQQQQT--LVLRLSQPLSLKKKVSWKEGTVDNEFLQRKSSKKC 264
           RP+SS+ T+ I LENP  Q Q T  LVLRL++    KKKVSWK+GTVDNEF+Q+KSSKKC
Sbjct: 6   RPSSSATTSVI-LENPVSQSQPTERLVLRLNRK---KKKVSWKDGTVDNEFMQKKSSKKC 61

Query: 265 CIF 273
           CIF
Sbjct: 62  CIF 64


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