BLASTX nr result
ID: Coptis21_contig00010694
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00010694 (826 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266319.2| PREDICTED: RING-H2 finger protein ATL7-like ... 60 8e-07 ref|XP_003605368.1| RING finger family protein [Medicago truncat... 59 2e-06 ref|XP_002521749.1| protein with unknown function [Ricinus commu... 57 4e-06 >ref|XP_002266319.2| PREDICTED: RING-H2 finger protein ATL7-like [Vitis vinifera] gi|297734760|emb|CBI16994.3| unnamed protein product [Vitis vinifera] Length = 221 Score = 59.7 bits (143), Expect = 8e-07 Identities = 33/52 (63%), Positives = 41/52 (78%), Gaps = 3/52 (5%) Frame = -1 Query: 826 RVDWSSSLQMRASYLNNNPR---LSESGLKKELREMLPIIVFRESFSIRDTQ 680 RVDW+S L+MR+S N+ +SE GLKKE+REMLPIIVF+ESFS+ DTQ Sbjct: 49 RVDWAS-LRMRSSMQNDADHASGVSELGLKKEVREMLPIIVFKESFSVSDTQ 99 >ref|XP_003605368.1| RING finger family protein [Medicago truncatula] gi|355506423|gb|AES87565.1| RING finger family protein [Medicago truncatula] Length = 226 Score = 58.5 bits (140), Expect = 2e-06 Identities = 32/54 (59%), Positives = 36/54 (66%), Gaps = 5/54 (9%) Frame = -1 Query: 826 RVDWSSSLQMRASYL-----NNNPRLSESGLKKELREMLPIIVFRESFSIRDTQ 680 RVDWSS S L NN S+ GLKKELREMLPIIV+ ESFS++DTQ Sbjct: 56 RVDWSSIRMRSVSVLQHHHNNNATSTSDLGLKKELREMLPIIVYNESFSVKDTQ 109 >ref|XP_002521749.1| protein with unknown function [Ricinus communis] gi|223538962|gb|EEF40559.1| protein with unknown function [Ricinus communis] Length = 337 Score = 57.4 bits (137), Expect = 4e-06 Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 1/50 (2%) Frame = -1 Query: 826 RVDWSSSLQMRASYL-NNNPRLSESGLKKELREMLPIIVFRESFSIRDTQ 680 RVDW+S L+MRA+ ++N +E GLKKE+REMLPIIV++ESFS++DTQ Sbjct: 57 RVDWAS-LRMRANLQGSDNIFRAELGLKKEVREMLPIIVYKESFSVKDTQ 105