BLASTX nr result

ID: Coptis21_contig00010693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010693
         (1602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264685.1| PREDICTED: APO protein 1, chloroplastic [Vit...   629   e-178
emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]   628   e-177
ref|XP_003548251.1| PREDICTED: APO protein 1, chloroplastic-like...   591   e-166
ref|XP_003533257.1| PREDICTED: APO protein 1, chloroplastic-like...   585   e-164
ref|XP_004149527.1| PREDICTED: APO protein 1, chloroplastic-like...   558   e-156

>ref|XP_002264685.1| PREDICTED: APO protein 1, chloroplastic [Vitis vinifera]
            gi|297734690|emb|CBI16741.3| unnamed protein product
            [Vitis vinifera]
          Length = 444

 Score =  629 bits (1621), Expect = e-178
 Identities = 294/404 (72%), Positives = 342/404 (84%)
 Frame = -3

Query: 1360 LQIRHQQLQSDRPTTSGTLVCVCGGYRGDYTVNRKESYPQNVDLPPIWPRDKKKPYLVPI 1181
            L+ +  Q+ + +P  SGT +CV    + D T  ++ +YPQNVDLPPI P+ KKKPY +P+
Sbjct: 42   LKFQQGQILTGQPKISGTFLCVSQKPQEDATFKKQIAYPQNVDLPPILPKKKKKPYPIPL 101

Query: 1180 KKIHQVARADKKLAEKGIEKQLEPPKNGLLVSELVPVAYEVLEAWKVLIEGLAQLLHVIP 1001
            KKI Q AR DKKLA+KGIEK LEPPKNGL+V +LVPVAYEVL+AWKVLI+GLAQLLHVIP
Sbjct: 102  KKIRQAARDDKKLAQKGIEKPLEPPKNGLIVPDLVPVAYEVLDAWKVLIKGLAQLLHVIP 161

Query: 1000 VHGCSLCPEVHVGQTGHEIQDCRGTGNVHRRSFHSWVKGSINDVLLPIESYHLYDPFGRR 821
            VHGCS C E+HV Q+GH IQDC G  +V RR  HSWVKGSINDVL+PIESYHLYDPFGRR
Sbjct: 162  VHGCSECSEIHVAQSGHHIQDCTGPSSVKRRGLHSWVKGSINDVLIPIESYHLYDPFGRR 221

Query: 820  IKHETRFDYDRIPAVVELCIQAGVDLPEYPSRRRTRPIRMIGKKVTDRDGFVEEPKRYRS 641
            IKHETRF YDRIPAVVELC+QAGVDLPEYPSRRRT PIRMIGKKV DR GFVEEP+ + S
Sbjct: 222  IKHETRFSYDRIPAVVELCVQAGVDLPEYPSRRRTIPIRMIGKKVIDRGGFVEEPEPFHS 281

Query: 640  GDSSSLLAELDTYGAQSGKFLPPAASELPLVGQKTLKAYETVRSGVQRLMKKYSVKACGY 461
             DSSSLL ++DT+GA  G+F PP  S++P + Q+T+ AYE VR GV++LM+KY+VKACGY
Sbjct: 282  SDSSSLLMDIDTHGA-FGRFPPPPLSDIPRIAQETIDAYEVVRWGVRKLMRKYTVKACGY 340

Query: 460  CSEIHVGPWGHNAKLCGAFKHQWRDGKHGWQDAAVDEVFPPNYVWHVQDGRGPRLRSALK 281
            CSE+HVGPWGHNAKLCG FKHQWRDGKHGWQDA V+EV PPNYV+H++D +GP LRS LK
Sbjct: 341  CSEVHVGPWGHNAKLCGEFKHQWRDGKHGWQDATVEEVIPPNYVYHLRDPKGPPLRSGLK 400

Query: 280  RFYGKAPAVIELCMQAGAEVPDKYKPMMRLDIVVPDAEEKNLVA 149
            RFYGKAPAV+E+CMQAGA+VPDKYKPMMRLDIV+PD EE  LVA
Sbjct: 401  RFYGKAPAVVEVCMQAGAQVPDKYKPMMRLDIVIPDTEESRLVA 444


>emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
          Length = 932

 Score =  628 bits (1620), Expect = e-177
 Identities = 293/404 (72%), Positives = 342/404 (84%)
 Frame = -3

Query: 1360 LQIRHQQLQSDRPTTSGTLVCVCGGYRGDYTVNRKESYPQNVDLPPIWPRDKKKPYLVPI 1181
            ++ +  Q+ + +P  SGT +CV    + D T  ++ +YPQNVDLPPI P+ KKKPY +P+
Sbjct: 530  IEFQQGQILTGQPKISGTFLCVSQKPQEDATFKKQIAYPQNVDLPPILPKKKKKPYPIPL 589

Query: 1180 KKIHQVARADKKLAEKGIEKQLEPPKNGLLVSELVPVAYEVLEAWKVLIEGLAQLLHVIP 1001
            KKI Q AR DKKLA+KGIEK LEPPKNGL+V +LVPVAYEVL+AWKVLI+GLAQLLHVIP
Sbjct: 590  KKIRQAARDDKKLAQKGIEKPLEPPKNGLIVPDLVPVAYEVLDAWKVLIKGLAQLLHVIP 649

Query: 1000 VHGCSLCPEVHVGQTGHEIQDCRGTGNVHRRSFHSWVKGSINDVLLPIESYHLYDPFGRR 821
            VHGCS C E+HV Q+GH IQDC G  +V RR  HSWVKGSINDVL+PIESYHLYDPFGRR
Sbjct: 650  VHGCSECSEIHVAQSGHHIQDCTGPSSVKRRGLHSWVKGSINDVLIPIESYHLYDPFGRR 709

Query: 820  IKHETRFDYDRIPAVVELCIQAGVDLPEYPSRRRTRPIRMIGKKVTDRDGFVEEPKRYRS 641
            IKHETRF YDRIPAVVELC+QAGVDLPEYPSRRRT PIRMIGKKV DR GFVEEP+ + S
Sbjct: 710  IKHETRFSYDRIPAVVELCVQAGVDLPEYPSRRRTIPIRMIGKKVIDRGGFVEEPEPFHS 769

Query: 640  GDSSSLLAELDTYGAQSGKFLPPAASELPLVGQKTLKAYETVRSGVQRLMKKYSVKACGY 461
             DSSSLL ++DT+GA  G+F PP  S++P + Q+T+ AYE VR GV++LM+KY+VKACGY
Sbjct: 770  SDSSSLLMDIDTHGA-FGRFPPPPLSDIPRIAQETIDAYEVVRWGVRKLMRKYTVKACGY 828

Query: 460  CSEIHVGPWGHNAKLCGAFKHQWRDGKHGWQDAAVDEVFPPNYVWHVQDGRGPRLRSALK 281
            CSE+HVGPWGHNAKLCG FKHQWRDGKHGWQDA V+EV PPNYV+H++D +GP LRS LK
Sbjct: 829  CSEVHVGPWGHNAKLCGEFKHQWRDGKHGWQDATVEEVIPPNYVYHLRDPKGPPLRSGLK 888

Query: 280  RFYGKAPAVIELCMQAGAEVPDKYKPMMRLDIVVPDAEEKNLVA 149
            RFYGKAPAV+E+CMQAGA+VPDKYKPMMRLDIV+PD EE  LVA
Sbjct: 889  RFYGKAPAVVEVCMQAGAQVPDKYKPMMRLDIVIPDTEESRLVA 932


>ref|XP_003548251.1| PREDICTED: APO protein 1, chloroplastic-like [Glycine max]
          Length = 438

 Score =  591 bits (1524), Expect = e-166
 Identities = 277/404 (68%), Positives = 331/404 (81%)
 Frame = -3

Query: 1360 LQIRHQQLQSDRPTTSGTLVCVCGGYRGDYTVNRKESYPQNVDLPPIWPRDKKKPYLVPI 1181
            L+   QQ    R    G LVC     +G  TV R+++ PQN DLPPI P++KKKPY +P 
Sbjct: 39   LKFNCQQFCKGRSKLPGVLVCASRRPKG--TVWRRKTLPQNEDLPPILPKNKKKPYPIPF 96

Query: 1180 KKIHQVARADKKLAEKGIEKQLEPPKNGLLVSELVPVAYEVLEAWKVLIEGLAQLLHVIP 1001
            K+I Q  R D+KLA  GIEK LEPPKNGLLV +LVPVAYEV +AWK+LIEGLAQLLHVIP
Sbjct: 97   KEIKQAGREDRKLAHMGIEKPLEPPKNGLLVPDLVPVAYEVFDAWKLLIEGLAQLLHVIP 156

Query: 1000 VHGCSLCPEVHVGQTGHEIQDCRGTGNVHRRSFHSWVKGSINDVLLPIESYHLYDPFGRR 821
             HGCS C EVHV QTGH I+DC GT    RRS H+WVKGS+ND+L+PIESYHL+DPFGRR
Sbjct: 157  AHGCSECSEVHVAQTGHHIRDCSGTNGRQRRSSHAWVKGSVNDILVPIESYHLFDPFGRR 216

Query: 820  IKHETRFDYDRIPAVVELCIQAGVDLPEYPSRRRTRPIRMIGKKVTDRDGFVEEPKRYRS 641
            IKH+TRF+YDRIPAVVELCIQAGVD+PEYPSRRRT PIRM+G++V DR G +EEPK +R 
Sbjct: 217  IKHDTRFEYDRIPAVVELCIQAGVDIPEYPSRRRTNPIRMLGRRVIDRGGNLEEPKPWRF 276

Query: 640  GDSSSLLAELDTYGAQSGKFLPPAASELPLVGQKTLKAYETVRSGVQRLMKKYSVKACGY 461
             D SS L + DTY A S +F  P+ S+LP + Q+T+ AYETV+ GV++LM+KY+VKACGY
Sbjct: 277  ADPSS-LNDFDTYRA-SERFPRPSLSDLPKIAQETMSAYETVKKGVKKLMRKYTVKACGY 334

Query: 460  CSEIHVGPWGHNAKLCGAFKHQWRDGKHGWQDAAVDEVFPPNYVWHVQDGRGPRLRSALK 281
            C+E+HVGPWGHNAKLCGAFKHQWRDGKHGWQDA VDEVFPPNYVWHV+D RGP L SAL+
Sbjct: 335  CTEVHVGPWGHNAKLCGAFKHQWRDGKHGWQDATVDEVFPPNYVWHVRDPRGPPLASALR 394

Query: 280  RFYGKAPAVIELCMQAGAEVPDKYKPMMRLDIVVPDAEEKNLVA 149
            R+YGKAPAV+E+CMQAGA++P++YKPMMRLDI++PD EE  ++A
Sbjct: 395  RYYGKAPAVVEVCMQAGAQIPEEYKPMMRLDIIIPDTEEARMIA 438


>ref|XP_003533257.1| PREDICTED: APO protein 1, chloroplastic-like [Glycine max]
          Length = 438

 Score =  585 bits (1508), Expect = e-164
 Identities = 273/404 (67%), Positives = 330/404 (81%)
 Frame = -3

Query: 1360 LQIRHQQLQSDRPTTSGTLVCVCGGYRGDYTVNRKESYPQNVDLPPIWPRDKKKPYLVPI 1181
            L+   QQ    R T  G LVC     +G  T+ R+++  QN DLPPI P++KKKPY +P 
Sbjct: 39   LKFNCQQFCKGRSTLPGVLVCASRRPKG--TIWRRKTLQQNEDLPPILPKNKKKPYPIPF 96

Query: 1180 KKIHQVARADKKLAEKGIEKQLEPPKNGLLVSELVPVAYEVLEAWKVLIEGLAQLLHVIP 1001
            K+I Q  R D+KLA  GIEK LEPPKNGLLV +L+PVAYEV  AWK+LI+GLAQLLHVIP
Sbjct: 97   KEIKQAGREDRKLAHMGIEKPLEPPKNGLLVPDLIPVAYEVFGAWKLLIKGLAQLLHVIP 156

Query: 1000 VHGCSLCPEVHVGQTGHEIQDCRGTGNVHRRSFHSWVKGSINDVLLPIESYHLYDPFGRR 821
            VHGCS C EVHV QTGH I+DC GT    RRS H+WVKGS+ND+L+PIESYHL+DPFGRR
Sbjct: 157  VHGCSECTEVHVAQTGHHIRDCSGTNGRQRRSSHAWVKGSVNDILVPIESYHLFDPFGRR 216

Query: 820  IKHETRFDYDRIPAVVELCIQAGVDLPEYPSRRRTRPIRMIGKKVTDRDGFVEEPKRYRS 641
            IKH+TRF+YDRIPAVVELC+QAGVD+PEYPSRRRT PIR++G++V DR G +EEPK +R 
Sbjct: 217  IKHDTRFEYDRIPAVVELCVQAGVDIPEYPSRRRTNPIRILGRRVIDRGGNLEEPKPWRF 276

Query: 640  GDSSSLLAELDTYGAQSGKFLPPAASELPLVGQKTLKAYETVRSGVQRLMKKYSVKACGY 461
             D SS L + DTY A S +F  P+ S+LP + Q+T+ AYETV+ GV++LM+KY+VKACGY
Sbjct: 277  ADPSS-LNDFDTYRA-SERFPLPSLSDLPKIAQETMSAYETVKKGVKKLMRKYTVKACGY 334

Query: 460  CSEIHVGPWGHNAKLCGAFKHQWRDGKHGWQDAAVDEVFPPNYVWHVQDGRGPRLRSALK 281
            C+E+HVGPWGHNAKLCGAFKHQWRDGKHGWQDA VDEVFPPNYVWHV+D RGP L SAL+
Sbjct: 335  CTEVHVGPWGHNAKLCGAFKHQWRDGKHGWQDATVDEVFPPNYVWHVRDPRGPPLASALR 394

Query: 280  RFYGKAPAVIELCMQAGAEVPDKYKPMMRLDIVVPDAEEKNLVA 149
            R+YGKAPAV+E+CMQAGA++P+ YKPMMRLDI++PD EE  ++A
Sbjct: 395  RYYGKAPAVVEVCMQAGAQIPEDYKPMMRLDIIIPDTEEARMIA 438


>ref|XP_004149527.1| PREDICTED: APO protein 1, chloroplastic-like [Cucumis sativus]
            gi|449505817|ref|XP_004162576.1| PREDICTED: APO protein
            1, chloroplastic-like [Cucumis sativus]
          Length = 443

 Score =  558 bits (1439), Expect = e-156
 Identities = 266/400 (66%), Positives = 317/400 (79%)
 Frame = -3

Query: 1348 HQQLQSDRPTTSGTLVCVCGGYRGDYTVNRKESYPQNVDLPPIWPRDKKKPYLVPIKKIH 1169
            H+ L    PT   TL      Y  +    +++ Y QNVDLP I P+ KKKPY +PIK+I 
Sbjct: 46   HKLLSQKVPTALRTLSYTSQEYGKEPVSKKQDMYRQNVDLPAILPKKKKKPYPIPIKQIK 105

Query: 1168 QVARADKKLAEKGIEKQLEPPKNGLLVSELVPVAYEVLEAWKVLIEGLAQLLHVIPVHGC 989
            + ARADK+LA++GIEK LEP KNGLLV +L+PVA++V++AWK+LI+GL+ LLHVIPV+ C
Sbjct: 106  RAARADKELAQRGIEKPLEPGKNGLLVPDLIPVAHQVMDAWKILIKGLSHLLHVIPVYAC 165

Query: 988  SLCPEVHVGQTGHEIQDCRGTGNVHRRSFHSWVKGSINDVLLPIESYHLYDPFGRRIKHE 809
              C EVHV  +GH IQDC G  +  RRSFHSWV GSINDVL+PIESYHLYDPFGRRIKHE
Sbjct: 166  RECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHE 225

Query: 808  TRFDYDRIPAVVELCIQAGVDLPEYPSRRRTRPIRMIGKKVTDRDGFVEEPKRYRSGDSS 629
            TRF+YDRIPAVVELCIQAGVD+PEYPSRRRT+PI+MIGKKV DR G +EEPK ++S DS 
Sbjct: 226  TRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSY 285

Query: 628  SLLAELDTYGAQSGKFLPPAASELPLVGQKTLKAYETVRSGVQRLMKKYSVKACGYCSEI 449
             LL + DT GA   +F PP   ++P + Q+T+ AYETVR GV+ LMKKY+VKACGYC E+
Sbjct: 286  PLL-DFDTQGAPQ-RFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEV 343

Query: 448  HVGPWGHNAKLCGAFKHQWRDGKHGWQDAAVDEVFPPNYVWHVQDGRGPRLRSALKRFYG 269
            HVGPWGHNAKLCG FKHQWRDGKHGWQDA +DEV P NYVWHV+D +GP L   LKRFYG
Sbjct: 344  HVGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYG 403

Query: 268  KAPAVIELCMQAGAEVPDKYKPMMRLDIVVPDAEEKNLVA 149
            KAPAV+E+C+QAGA +P KY PMMRLDIV+PD+EE   VA
Sbjct: 404  KAPAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 443


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