BLASTX nr result

ID: Coptis21_contig00010674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010674
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32397.3| unnamed protein product [Vitis vinifera]              149   1e-33
ref|XP_002285134.1| PREDICTED: thioredoxin M3, chloroplastic [Vi...   149   1e-33
gb|AEC03325.1| mitochondrial thioredoxin 2 [Hevea brasiliensis]       147   5e-33
emb|CAN64993.1| hypothetical protein VITISV_001777 [Vitis vinifera]   146   7e-33
ref|XP_002313121.1| thioredoxin m [Populus trichocarpa] gi|22284...   145   1e-32

>emb|CBI32397.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score =  149 bits (376), Expect = 1e-33
 Identities = 64/104 (61%), Positives = 87/104 (83%)
 Frame = -2

Query: 744 VVTGGTWEEFVLNSDIPVLVEFWAAWCGPCRMVHREVEEIAKEYTGKINCYMLKADEHIE 565
           VVTG +WE+ +LNS+IPVLVEF+A+WCGPCRMVHR ++EIA++Y G++ C++L  D  + 
Sbjct: 142 VVTGDSWEKSILNSEIPVLVEFYASWCGPCRMVHRVIDEIAEDYAGRLKCFVLNTDHDLH 201

Query: 564 IADRYDIKVVPVVVLFKNGEKRDSVTGTMPNYVYTAAIEKLLTA 433
           IA+ Y+IK VPVV+LFKNGEKR+SV GTMP   Y AAIE++L++
Sbjct: 202 IAENYEIKAVPVVLLFKNGEKRESVVGTMPKEFYVAAIERVLSS 245


>ref|XP_002285134.1| PREDICTED: thioredoxin M3, chloroplastic [Vitis vinifera]
          Length = 172

 Score =  149 bits (376), Expect = 1e-33
 Identities = 64/104 (61%), Positives = 87/104 (83%)
 Frame = -2

Query: 744 VVTGGTWEEFVLNSDIPVLVEFWAAWCGPCRMVHREVEEIAKEYTGKINCYMLKADEHIE 565
           VVTG +WE+ +LNS+IPVLVEF+A+WCGPCRMVHR ++EIA++Y G++ C++L  D  + 
Sbjct: 69  VVTGDSWEKSILNSEIPVLVEFYASWCGPCRMVHRVIDEIAEDYAGRLKCFVLNTDHDLH 128

Query: 564 IADRYDIKVVPVVVLFKNGEKRDSVTGTMPNYVYTAAIEKLLTA 433
           IA+ Y+IK VPVV+LFKNGEKR+SV GTMP   Y AAIE++L++
Sbjct: 129 IAENYEIKAVPVVLLFKNGEKRESVVGTMPKEFYVAAIERVLSS 172


>gb|AEC03325.1| mitochondrial thioredoxin 2 [Hevea brasiliensis]
          Length = 174

 Score =  147 bits (370), Expect = 5e-33
 Identities = 65/110 (59%), Positives = 84/110 (76%)
 Frame = -2

Query: 768 CVRHGDLPVVTGGTWEEFVLNSDIPVLVEFWAAWCGPCRMVHREVEEIAKEYTGKINCYM 589
           C R      VT  +WE+ +L SDIPVLVEF+A+WCGPCRMVHR ++EIA +Y GK+ C++
Sbjct: 63  CSRDSRAAAVTKDSWEKLILKSDIPVLVEFYASWCGPCRMVHRVIDEIAGDYDGKLKCFV 122

Query: 588 LKADEHIEIADRYDIKVVPVVVLFKNGEKRDSVTGTMPNYVYTAAIEKLL 439
           L  D  ++IA+ Y+IK VPVV+LFKNGEKR+SV GTMP   Y AAIE++L
Sbjct: 123 LNTDSDLQIAENYEIKAVPVVLLFKNGEKRESVVGTMPKEFYVAAIERVL 172


>emb|CAN64993.1| hypothetical protein VITISV_001777 [Vitis vinifera]
          Length = 213

 Score =  146 bits (369), Expect = 7e-33
 Identities = 63/100 (63%), Positives = 83/100 (83%)
 Frame = -2

Query: 744 VVTGGTWEEFVLNSDIPVLVEFWAAWCGPCRMVHREVEEIAKEYTGKINCYMLKADEHIE 565
           VVTG +WE+ +LNS+IPVLVEF+A+WCGPCRMVHR ++EIA++Y G++ C++L  D  + 
Sbjct: 69  VVTGDSWEKSILNSEIPVLVEFYASWCGPCRMVHRVIDEIAEDYAGRLKCFVLNTDHDLH 128

Query: 564 IADRYDIKVVPVVVLFKNGEKRDSVTGTMPNYVYTAAIEK 445
           IA+ Y+IK VPVV+LFKNGEKR+SV GTMP   Y AAIE+
Sbjct: 129 IAENYEIKAVPVVLLFKNGEKRESVVGTMPKEFYVAAIER 168


>ref|XP_002313121.1| thioredoxin m [Populus trichocarpa] gi|222849529|gb|EEE87076.1|
           thioredoxin m [Populus trichocarpa]
          Length = 171

 Score =  145 bits (367), Expect = 1e-32
 Identities = 66/114 (57%), Positives = 85/114 (74%)
 Frame = -2

Query: 780 VKTGCVRHGDLPVVTGGTWEEFVLNSDIPVLVEFWAAWCGPCRMVHREVEEIAKEYTGKI 601
           +K  C R      VT  +WE  +L SDIPVLVEF+A+WCGPCRMVHR ++EIA EY GK+
Sbjct: 56  LKVLCGRGNRATAVTQDSWENSILKSDIPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKL 115

Query: 600 NCYMLKADEHIEIADRYDIKVVPVVVLFKNGEKRDSVTGTMPNYVYTAAIEKLL 439
            C++L  D  ++IA+ Y+IK VPVV+LFKNGEKR+SV GTMP   Y AA+E++L
Sbjct: 116 KCFVLNTDNDLQIAEDYEIKAVPVVLLFKNGEKRESVVGTMPKEFYIAAVERVL 169


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