BLASTX nr result

ID: Coptis21_contig00010649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010649
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519646.1| PREDICTED: cytochrome c oxidase assembly pro...   219   2e-55
gb|ACU24539.1| unknown [Glycine max]                                  219   2e-55
ref|XP_002269231.2| PREDICTED: cytochrome c oxidase assembly pro...   218   5e-55
ref|XP_003544552.1| PREDICTED: cytochrome c oxidase assembly pro...   216   1e-54
ref|XP_004137225.1| PREDICTED: cytochrome c oxidase assembly pro...   216   2e-54

>ref|XP_003519646.1| PREDICTED: cytochrome c oxidase assembly protein COX15-like
           [Glycine max]
          Length = 455

 Score =  219 bits (558), Expect = 2e-55
 Identities = 105/117 (89%), Positives = 110/117 (94%)
 Frame = +3

Query: 3   LSALFALGAGQGLIGWWMVKSGLEEPESEYVQPRVSPYRLAAHLTSAFAIYCGLLWTGLS 182
           LSALFALGAGQGLIGWWMVKSGLEEP SEY QPRVSPYRLAAHLTSAFAIYCGL WT LS
Sbjct: 213 LSALFALGAGQGLIGWWMVKSGLEEPPSEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALS 272

Query: 183 VVMPEPPAGSMAWVRGAAKLQRLVLPISVLVGITAVSGAFVAGNDAGHAFNTFPKMG 353
           VVMPEPPA S+ WVRGAAK++RL LPIS+LVG+TAVSGAFVAGNDAGHAFNTFPKMG
Sbjct: 273 VVMPEPPAESLTWVRGAAKVRRLALPISILVGLTAVSGAFVAGNDAGHAFNTFPKMG 329


>gb|ACU24539.1| unknown [Glycine max]
          Length = 356

 Score =  219 bits (558), Expect = 2e-55
 Identities = 105/117 (89%), Positives = 110/117 (94%)
 Frame = +3

Query: 3   LSALFALGAGQGLIGWWMVKSGLEEPESEYVQPRVSPYRLAAHLTSAFAIYCGLLWTGLS 182
           LSALFALGAGQGLIGWWMVKSGLEEP SEY QPRVSPYRLAAHLTSAFAIYCGL WT LS
Sbjct: 213 LSALFALGAGQGLIGWWMVKSGLEEPPSEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALS 272

Query: 183 VVMPEPPAGSMAWVRGAAKLQRLVLPISVLVGITAVSGAFVAGNDAGHAFNTFPKMG 353
           VVMPEPPA S+ WVRGAAK++RL LPIS+LVG+TAVSGAFVAGNDAGHAFNTFPKMG
Sbjct: 273 VVMPEPPAESLTWVRGAAKVRRLALPISILVGLTAVSGAFVAGNDAGHAFNTFPKMG 329


>ref|XP_002269231.2| PREDICTED: cytochrome c oxidase assembly protein COX15-like [Vitis
           vinifera] gi|296089997|emb|CBI39816.3| unnamed protein
           product [Vitis vinifera]
          Length = 452

 Score =  218 bits (554), Expect = 5e-55
 Identities = 104/117 (88%), Positives = 109/117 (93%)
 Frame = +3

Query: 3   LSALFALGAGQGLIGWWMVKSGLEEPESEYVQPRVSPYRLAAHLTSAFAIYCGLLWTGLS 182
           LSALF LGAGQGLIGWWMVKSGLEEP SEY QPRVSPYRL AHLTSAF IYCGLLWT LS
Sbjct: 210 LSALFGLGAGQGLIGWWMVKSGLEEPASEYAQPRVSPYRLTAHLTSAFVIYCGLLWTALS 269

Query: 183 VVMPEPPAGSMAWVRGAAKLQRLVLPISVLVGITAVSGAFVAGNDAGHAFNTFPKMG 353
           VVMPEPPA S+AWVRGAAK++RL LPIS+LVGITAVSGAFVAGNDAGHA+NTFPKMG
Sbjct: 270 VVMPEPPAESVAWVRGAAKVKRLALPISILVGITAVSGAFVAGNDAGHAYNTFPKMG 326


>ref|XP_003544552.1| PREDICTED: cytochrome c oxidase assembly protein COX15-like
           [Glycine max]
          Length = 456

 Score =  216 bits (551), Expect = 1e-54
 Identities = 105/117 (89%), Positives = 109/117 (93%)
 Frame = +3

Query: 3   LSALFALGAGQGLIGWWMVKSGLEEPESEYVQPRVSPYRLAAHLTSAFAIYCGLLWTGLS 182
           LSALFALGAGQGLIGWWMVKSGLEEP SEY QPRVS YRLAAHLTSAFAIYCGL WT LS
Sbjct: 214 LSALFALGAGQGLIGWWMVKSGLEEPPSEYSQPRVSSYRLAAHLTSAFAIYCGLFWTALS 273

Query: 183 VVMPEPPAGSMAWVRGAAKLQRLVLPISVLVGITAVSGAFVAGNDAGHAFNTFPKMG 353
           VVMPEPPA S+ WVRGAAK++RL LPISVLVG+TAVSGAFVAGNDAGHAFNTFPKMG
Sbjct: 274 VVMPEPPAESLTWVRGAAKVRRLALPISVLVGLTAVSGAFVAGNDAGHAFNTFPKMG 330


>ref|XP_004137225.1| PREDICTED: cytochrome c oxidase assembly protein COX15-like
           [Cucumis sativus] gi|449483177|ref|XP_004156514.1|
           PREDICTED: cytochrome c oxidase assembly protein
           COX15-like [Cucumis sativus]
          Length = 449

 Score =  216 bits (549), Expect = 2e-54
 Identities = 101/117 (86%), Positives = 109/117 (93%)
 Frame = +3

Query: 3   LSALFALGAGQGLIGWWMVKSGLEEPESEYVQPRVSPYRLAAHLTSAFAIYCGLLWTGLS 182
           LS LFALGAGQGLIGWWMVKSGLEEP SEYVQPRVSPYRLAAHLTSAF IYCGL WTGLS
Sbjct: 207 LSTLFALGAGQGLIGWWMVKSGLEEPASEYVQPRVSPYRLAAHLTSAFIIYCGLFWTGLS 266

Query: 183 VVMPEPPAGSMAWVRGAAKLQRLVLPISVLVGITAVSGAFVAGNDAGHAFNTFPKMG 353
           VVMPEPP  S+AW RGAAK++R+ LP+S+LVGITA+SGAFVAGNDAGHA+NTFPKMG
Sbjct: 267 VVMPEPPVESVAWARGAAKVRRIALPVSLLVGITAISGAFVAGNDAGHAYNTFPKMG 323


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