BLASTX nr result

ID: Coptis21_contig00010641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010641
         (1353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324510.1| predicted protein [Populus trichocarpa] gi|2...   511   e-175
ref|XP_004162690.1| PREDICTED: UDP-glucuronate 4-epimerase 1-lik...   514   e-175
ref|XP_002528222.1| UDP-glucuronate 5-epimerase, putative [Ricin...   508   e-175
ref|XP_004144711.1| PREDICTED: UDP-glucuronate 4-epimerase 1-lik...   513   e-175
ref|XP_003519171.1| PREDICTED: UDP-glucuronate 4-epimerase 1-lik...   509   e-174

>ref|XP_002324510.1| predicted protein [Populus trichocarpa] gi|222865944|gb|EEF03075.1|
            predicted protein [Populus trichocarpa]
          Length = 431

 Score =  511 bits (1317), Expect(3) = e-175
 Identities = 249/283 (87%), Positives = 267/283 (94%)
 Frame = -1

Query: 1239 MRSLEDELFPSTPGKVKIERTNMLNRQFYRCFASTSTMFLWALFLIALTASYLSFQSFVD 1060
            M SLE+ELFPSTPGK KI+R + +NRQF RCFASTSTMFLWALFLIALTASYLSFQSFVD
Sbjct: 1    MPSLEEELFPSTPGKFKIDRAHNMNRQFNRCFASTSTMFLWALFLIALTASYLSFQSFVD 60

Query: 1059 SGSKYLTASWGGIQWEKQVRNSAIIQRQHGFSVLVTGSAGFVGTHVSLALKKRGDGVVGL 880
            SGS+Y TASWGGIQWEKQ+RNSA I R  G SVLVTG+AGFVG+HVSLALKKRGDGVVG+
Sbjct: 61   SGSRYFTASWGGIQWEKQIRNSAQIHRSKGMSVLVTGAAGFVGSHVSLALKKRGDGVVGI 120

Query: 879  DNFNNYYDPSLKKARKALLNNHGVFIVDGDLNDARLLSKLFDIIAFTHVMHLAAQAGVRY 700
            DNFNNYYDPSLKKARK+LLNN G+FIV+GD+NDARL++KLFDI+AFTHVMHLAAQAGVRY
Sbjct: 121  DNFNNYYDPSLKKARKSLLNNQGIFIVEGDINDARLIAKLFDIVAFTHVMHLAAQAGVRY 180

Query: 699  AMENPGSYVHSNIAGLVTLLEACKSANPQPSVVWASSSSVYGLNEKQPFSELDRTDQPAS 520
            AMENP SYVHSNIAGLVTLLEACK ANPQPSVVWASSSSVYGLNEK PFSE DRTDQPAS
Sbjct: 181  AMENPHSYVHSNIAGLVTLLEACKLANPQPSVVWASSSSVYGLNEKVPFSESDRTDQPAS 240

Query: 519  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 391
            LYAATKKAGEEITHTYNHIYGLS+TGLRFFTVYGP+GRPDMAY
Sbjct: 241  LYAATKKAGEEITHTYNHIYGLSVTGLRFFTVYGPFGRPDMAY 283



 Score = 85.9 bits (211), Expect(3) = e-175
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = -3

Query: 331 RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDI 212
           RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDI
Sbjct: 278 RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDI 317



 Score = 69.7 bits (169), Expect(3) = e-175
 Identities = 35/48 (72%), Positives = 37/48 (77%)
 Frame = -2

Query: 146 VKGCLGSLDXXXXXXXXXXXKRGPAPYRIFNLGNTSPVTVPTLVSILE 3
           VKGC+GSLD           KRGPAPYRIFNLGNTSPVTVPTLV+ILE
Sbjct: 318 VKGCVGSLDTSGKSTGSGGKKRGPAPYRIFNLGNTSPVTVPTLVNILE 365


>ref|XP_004162690.1| PREDICTED: UDP-glucuronate 4-epimerase 1-like [Cucumis sativus]
          Length = 431

 Score =  514 bits (1325), Expect(3) = e-175
 Identities = 250/283 (88%), Positives = 267/283 (94%)
 Frame = -1

Query: 1239 MRSLEDELFPSTPGKVKIERTNMLNRQFYRCFASTSTMFLWALFLIALTASYLSFQSFVD 1060
            M SLEDELFPSTPGK KI+R + +NRQF+RCFASTSTMFLWALFLIALTASYLSFQSFVD
Sbjct: 1    MPSLEDELFPSTPGKFKIDRNHPMNRQFHRCFASTSTMFLWALFLIALTASYLSFQSFVD 60

Query: 1059 SGSKYLTASWGGIQWEKQVRNSAIIQRQHGFSVLVTGSAGFVGTHVSLALKKRGDGVVGL 880
            SGS+Y +ASWGGIQWEKQVR SA   R +GFSVLVTG+AGFVG+HVSLALKKRGDGVVGL
Sbjct: 61   SGSRYFSASWGGIQWEKQVRISAQPHRTNGFSVLVTGAAGFVGSHVSLALKKRGDGVVGL 120

Query: 879  DNFNNYYDPSLKKARKALLNNHGVFIVDGDLNDARLLSKLFDIIAFTHVMHLAAQAGVRY 700
            DNFN+YYDPSLKKARK+LL+NHG+FIVDGD+ND RLL KLFD++ FTHVMHLAAQAGVRY
Sbjct: 121  DNFNSYYDPSLKKARKSLLSNHGIFIVDGDINDVRLLDKLFDVVVFTHVMHLAAQAGVRY 180

Query: 699  AMENPGSYVHSNIAGLVTLLEACKSANPQPSVVWASSSSVYGLNEKQPFSELDRTDQPAS 520
            AMENP SYVHSNIAGLVTLLEACKSANPQP+VVWASSSSVYGLNEK PFSE DRTDQPAS
Sbjct: 181  AMENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVYGLNEKVPFSESDRTDQPAS 240

Query: 519  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 391
            LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY
Sbjct: 241  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 283



 Score = 84.3 bits (207), Expect(3) = e-175
 Identities = 39/40 (97%), Positives = 40/40 (100%)
 Frame = -3

Query: 331 RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDI 212
           RPDMAYFSFTRNILQGKPITV+RGKNRVDLARDFTYIDDI
Sbjct: 278 RPDMAYFSFTRNILQGKPITVFRGKNRVDLARDFTYIDDI 317



 Score = 66.6 bits (161), Expect(3) = e-175
 Identities = 35/48 (72%), Positives = 35/48 (72%)
 Frame = -2

Query: 146 VKGCLGSLDXXXXXXXXXXXKRGPAPYRIFNLGNTSPVTVPTLVSILE 3
           VKGCLGSLD           K G APYRIFNLGNTSPVTVPTLVSILE
Sbjct: 318 VKGCLGSLDTSGKSTGSGGKKTGAAPYRIFNLGNTSPVTVPTLVSILE 365


>ref|XP_002528222.1| UDP-glucuronate 5-epimerase, putative [Ricinus communis]
            gi|223532383|gb|EEF34179.1| UDP-glucuronate 5-epimerase,
            putative [Ricinus communis]
          Length = 433

 Score =  508 bits (1308), Expect(3) = e-175
 Identities = 250/285 (87%), Positives = 269/285 (94%), Gaps = 2/285 (0%)
 Frame = -1

Query: 1239 MRSLEDELFPSTPGKVKIERT-NMLNRQFYRCFASTSTMFLWALFLIALTASYLSFQSFV 1063
            M SLE+ELFPSTPGK KI+R  + +NRQFYRCF STSTMFLWALFLIALTASYLSFQSF+
Sbjct: 1    MPSLEEELFPSTPGKFKIDRGGHTMNRQFYRCFTSTSTMFLWALFLIALTASYLSFQSFI 60

Query: 1062 DSGSKYLTASWGGIQWEKQVRNSAIIQRQHG-FSVLVTGSAGFVGTHVSLALKKRGDGVV 886
            DSGSKY +ASWGG+QWEKQVRNSA I R  G  SVLVTG+AGFVGTHVSLALKKRGDGVV
Sbjct: 61   DSGSKYFSASWGGLQWEKQVRNSAQIHRPSGGVSVLVTGAAGFVGTHVSLALKKRGDGVV 120

Query: 885  GLDNFNNYYDPSLKKARKALLNNHGVFIVDGDLNDARLLSKLFDIIAFTHVMHLAAQAGV 706
            GLDNFNNYYDPSLKKARK+LLN+HGVFIV+GD+NDARLL+KLFD++AF+HVMHLAAQAGV
Sbjct: 121  GLDNFNNYYDPSLKKARKSLLNSHGVFIVEGDVNDARLLAKLFDVVAFSHVMHLAAQAGV 180

Query: 705  RYAMENPGSYVHSNIAGLVTLLEACKSANPQPSVVWASSSSVYGLNEKQPFSELDRTDQP 526
            RYAMENP SYVHSNIAGLVTLLEACKSANPQP++VWASSSSVYGLN+K PFSE DRTDQP
Sbjct: 181  RYAMENPHSYVHSNIAGLVTLLEACKSANPQPAIVWASSSSVYGLNDKVPFSESDRTDQP 240

Query: 525  ASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 391
            ASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY
Sbjct: 241  ASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 285



 Score = 85.9 bits (211), Expect(3) = e-175
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = -3

Query: 331 RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDI 212
           RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDI
Sbjct: 280 RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDI 319



 Score = 70.9 bits (172), Expect(3) = e-175
 Identities = 36/48 (75%), Positives = 37/48 (77%)
 Frame = -2

Query: 146 VKGCLGSLDXXXXXXXXXXXKRGPAPYRIFNLGNTSPVTVPTLVSILE 3
           VKGC+GSLD           KRGPAPYRIFNLGNTSPVTVPTLVSILE
Sbjct: 320 VKGCVGSLDTAGKSTGSGGKKRGPAPYRIFNLGNTSPVTVPTLVSILE 367


>ref|XP_004144711.1| PREDICTED: UDP-glucuronate 4-epimerase 1-like [Cucumis sativus]
          Length = 431

 Score =  513 bits (1322), Expect(3) = e-175
 Identities = 249/283 (87%), Positives = 267/283 (94%)
 Frame = -1

Query: 1239 MRSLEDELFPSTPGKVKIERTNMLNRQFYRCFASTSTMFLWALFLIALTASYLSFQSFVD 1060
            M SLEDELFPSTPGK KI+R + +NRQF+RCFASTSTMFLWALFLIALTASYLSFQSFVD
Sbjct: 1    MPSLEDELFPSTPGKFKIDRNHPMNRQFHRCFASTSTMFLWALFLIALTASYLSFQSFVD 60

Query: 1059 SGSKYLTASWGGIQWEKQVRNSAIIQRQHGFSVLVTGSAGFVGTHVSLALKKRGDGVVGL 880
            SGS+Y +ASWGGIQWEKQVR SA   R +GFSV+VTG+AGFVG+HVSLALKKRGDGVVGL
Sbjct: 61   SGSRYFSASWGGIQWEKQVRISAQPHRTNGFSVVVTGAAGFVGSHVSLALKKRGDGVVGL 120

Query: 879  DNFNNYYDPSLKKARKALLNNHGVFIVDGDLNDARLLSKLFDIIAFTHVMHLAAQAGVRY 700
            DNFN+YYDPSLKKARK+LL+NHG+FIVDGD+ND RLL KLFD++ FTHVMHLAAQAGVRY
Sbjct: 121  DNFNSYYDPSLKKARKSLLSNHGIFIVDGDINDVRLLDKLFDVVVFTHVMHLAAQAGVRY 180

Query: 699  AMENPGSYVHSNIAGLVTLLEACKSANPQPSVVWASSSSVYGLNEKQPFSELDRTDQPAS 520
            AMENP SYVHSNIAGLVTLLEACKSANPQP+VVWASSSSVYGLNEK PFSE DRTDQPAS
Sbjct: 181  AMENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVYGLNEKVPFSESDRTDQPAS 240

Query: 519  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 391
            LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY
Sbjct: 241  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 283



 Score = 84.3 bits (207), Expect(3) = e-175
 Identities = 39/40 (97%), Positives = 40/40 (100%)
 Frame = -3

Query: 331 RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDI 212
           RPDMAYFSFTRNILQGKPITV+RGKNRVDLARDFTYIDDI
Sbjct: 278 RPDMAYFSFTRNILQGKPITVFRGKNRVDLARDFTYIDDI 317



 Score = 66.6 bits (161), Expect(3) = e-175
 Identities = 35/48 (72%), Positives = 35/48 (72%)
 Frame = -2

Query: 146 VKGCLGSLDXXXXXXXXXXXKRGPAPYRIFNLGNTSPVTVPTLVSILE 3
           VKGCLGSLD           K G APYRIFNLGNTSPVTVPTLVSILE
Sbjct: 318 VKGCLGSLDTSGKSTGSGGKKTGAAPYRIFNLGNTSPVTVPTLVSILE 365


>ref|XP_003519171.1| PREDICTED: UDP-glucuronate 4-epimerase 1-like [Glycine max]
          Length = 431

 Score =  509 bits (1310), Expect(3) = e-174
 Identities = 249/283 (87%), Positives = 266/283 (93%)
 Frame = -1

Query: 1239 MRSLEDELFPSTPGKVKIERTNMLNRQFYRCFASTSTMFLWALFLIALTASYLSFQSFVD 1060
            M SLE+ELFPSTPGK KIER + +NRQ YRCFASTSTMFLWALFLIALTASYLSFQ FVD
Sbjct: 1    MPSLEEELFPSTPGKFKIERAHHMNRQLYRCFASTSTMFLWALFLIALTASYLSFQGFVD 60

Query: 1059 SGSKYLTASWGGIQWEKQVRNSAIIQRQHGFSVLVTGSAGFVGTHVSLALKKRGDGVVGL 880
            SGS+YL+ASWGGIQWEKQVR SA I RQ G SVLVTG+AGFVG+HVSLALK+RGDGVVGL
Sbjct: 61   SGSRYLSASWGGIQWEKQVRTSAQIHRQGGMSVLVTGAAGFVGSHVSLALKRRGDGVVGL 120

Query: 879  DNFNNYYDPSLKKARKALLNNHGVFIVDGDLNDARLLSKLFDIIAFTHVMHLAAQAGVRY 700
            DNFN+YYDPSLKKARK+LL  H VFIVDGDLNDA+LL+KLFD++AFTHVMHLAAQAGVRY
Sbjct: 121  DNFNDYYDPSLKKARKSLLAKHDVFIVDGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRY 180

Query: 699  AMENPGSYVHSNIAGLVTLLEACKSANPQPSVVWASSSSVYGLNEKQPFSELDRTDQPAS 520
            AMENP SYVHSNIAGLVTLLEACKSANPQP+VVWASSSSVYGLNEK PFSE D+TD+PAS
Sbjct: 181  AMENPHSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVYGLNEKVPFSESDQTDRPAS 240

Query: 519  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 391
            LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY
Sbjct: 241  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 283



 Score = 84.0 bits (206), Expect(3) = e-174
 Identities = 39/40 (97%), Positives = 39/40 (97%)
 Frame = -3

Query: 331 RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDI 212
           RPDMAYFSFTRNILQGKPITVYRGKN VDLARDFTYIDDI
Sbjct: 278 RPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDI 317



 Score = 70.9 bits (172), Expect(3) = e-174
 Identities = 36/48 (75%), Positives = 37/48 (77%)
 Frame = -2

Query: 146 VKGCLGSLDXXXXXXXXXXXKRGPAPYRIFNLGNTSPVTVPTLVSILE 3
           VKGC+GSLD           KRGPAPYRIFNLGNTSPVTVPTLVSILE
Sbjct: 318 VKGCVGSLDTSAKSTGSGGKKRGPAPYRIFNLGNTSPVTVPTLVSILE 365


Top