BLASTX nr result

ID: Coptis21_contig00010639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010639
         (1480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154854.1| PREDICTED: AP-4 complex subunit mu-1-like [C...   827   0.0  
ref|XP_002281307.1| PREDICTED: AP-4 complex subunit mu-1 [Vitis ...   823   0.0  
ref|XP_004147850.1| PREDICTED: LOW QUALITY PROTEIN: AP-4 complex...   818   0.0  
ref|XP_002302340.1| predicted protein [Populus trichocarpa] gi|2...   805   0.0  
gb|ABR16746.1| unknown [Picea sitchensis]                             793   0.0  

>ref|XP_004154854.1| PREDICTED: AP-4 complex subunit mu-1-like [Cucumis sativus]
          Length = 451

 Score =  827 bits (2137), Expect = 0.0
 Identities = 410/451 (90%), Positives = 438/451 (97%)
 Frame = +2

Query: 83   MISQFFVLSQRGDNIVFRDYRGDVPKGSAEIFFRKVKFWKDDEEEEAPPVFNLDGVNYFH 262
            MISQFFVLSQRGDNIVFRDYRG+VPKGSAEIFFRKVKFWK+D E +APPVFNLDGVNYFH
Sbjct: 1    MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 263  VKVAGLLFLATTRVNMSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVID 442
            VKV GLLF+ATTR+N SPSLVLELLQRIARVIKDYLGVLNEDS R+NFVLVYELLDEVID
Sbjct: 61   VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVID 120

Query: 443  FGYVQTTSTELLKSYVFNEPIVVDAARLPPLGPAAMFMQGSKRMPGTAVTKSVVANEPGG 622
            FGYVQTTSTE+LKSYVFNEPIVVDAARLPPLGPA++F+QGSKRMPGTAVTKSVVANEPGG
Sbjct: 121  FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPGG 180

Query: 623  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLSIGRGGR 802
            RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALNEDLSIG+GGR
Sbjct: 181  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGKGGR 240

Query: 803  SIYDYASSAGAGAVILDDCNFHESVHLDSFDMDRTLTLVPPDGEFPVMNYRMTQEFKPPF 982
            SIYDY+SS+G G VILDDCNFHESVHL++FD+DRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 241  SIYDYSSSSGGGTVILDDCNFHESVHLENFDIDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 983  RINALIEEAGNFKAEVILKVRAEFSSNITANTIVVQMPLPKHTTRVSFELESGAVGNTTD 1162
            RINALIEEAG+ KAEVILKVRAEF+S+ITANTI++QMPLP  TTRVSFELE GAVGNTTD
Sbjct: 301  RINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 1163 FKEANKKLEWGLKKIVGGSEHTLRAKLTFSQESHGNIMKEAGPVSMTFTIPMYNASKLQV 1342
            FKEANK+LEWGLKKIVGGSEHTLRA+LTFSQESHGNI+KEAGPVSMTFTIPMYNAS+LQV
Sbjct: 361  FKEANKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKEAGPVSMTFTIPMYNASRLQV 420

Query: 1343 RYLQIAKKSKTYNPYRWVRYVTQANSYVARL 1435
            +YLQIAKKS TYNPYRWVRYVTQANSYVARL
Sbjct: 421  KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 451


>ref|XP_002281307.1| PREDICTED: AP-4 complex subunit mu-1 [Vitis vinifera]
            gi|302142544|emb|CBI19747.3| unnamed protein product
            [Vitis vinifera]
          Length = 451

 Score =  823 bits (2127), Expect = 0.0
 Identities = 411/451 (91%), Positives = 435/451 (96%)
 Frame = +2

Query: 83   MISQFFVLSQRGDNIVFRDYRGDVPKGSAEIFFRKVKFWKDDEEEEAPPVFNLDGVNYFH 262
            MISQFFVLSQRGDNIVFRDYRG+VPKGSAEIFFRKVKFWK+D E +APPVFN+DGVNYFH
Sbjct: 1    MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNVDGVNYFH 60

Query: 263  VKVAGLLFLATTRVNMSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVID 442
            VKVAGLLF+ATTRVN+SPSLVLELLQRIARVIKDYLG+LNEDS RKNFVLVYELLDEVID
Sbjct: 61   VKVAGLLFVATTRVNVSPSLVLELLQRIARVIKDYLGILNEDSLRKNFVLVYELLDEVID 120

Query: 443  FGYVQTTSTELLKSYVFNEPIVVDAARLPPLGPAAMFMQGSKRMPGTAVTKSVVANEPGG 622
            FGYVQTTSTE+LKSYVFNEPIVVDAARLP LGPA++FMQG+KRMPGTAVTKSVVANEPGG
Sbjct: 121  FGYVQTTSTEVLKSYVFNEPIVVDAARLPTLGPASIFMQGTKRMPGTAVTKSVVANEPGG 180

Query: 623  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLSIGRGGR 802
            RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALNE+LSIGRGGR
Sbjct: 181  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEELSIGRGGR 240

Query: 803  SIYDYASSAGAGAVILDDCNFHESVHLDSFDMDRTLTLVPPDGEFPVMNYRMTQEFKPPF 982
            SIYDY SS G+G VILDDCNFHESVHLDSFD+DRTLTLVPPDGEFPVMNYRMTQEFKPPF
Sbjct: 241  SIYDYNSSTGSGTVILDDCNFHESVHLDSFDIDRTLTLVPPDGEFPVMNYRMTQEFKPPF 300

Query: 983  RINALIEEAGNFKAEVILKVRAEFSSNITANTIVVQMPLPKHTTRVSFELESGAVGNTTD 1162
            RINALIEEAG  +AEVILKVRAEF S+ITANTI VQMPLP +TTRVSFELE GAVGNTTD
Sbjct: 301  RINALIEEAGALRAEVILKVRAEFPSSITANTIQVQMPLPPYTTRVSFELEPGAVGNTTD 360

Query: 1163 FKEANKKLEWGLKKIVGGSEHTLRAKLTFSQESHGNIMKEAGPVSMTFTIPMYNASKLQV 1342
            FKEANK+LEWGLKKIVGGSEHTLRAKLTFSQE HGNI +EAGPVSMTFTIPMYNAS+LQV
Sbjct: 361  FKEANKRLEWGLKKIVGGSEHTLRAKLTFSQELHGNITREAGPVSMTFTIPMYNASRLQV 420

Query: 1343 RYLQIAKKSKTYNPYRWVRYVTQANSYVARL 1435
            +YLQI+KKSK YNPYRWVRYVTQ+NSYVARL
Sbjct: 421  KYLQISKKSKAYNPYRWVRYVTQSNSYVARL 451


>ref|XP_004147850.1| PREDICTED: LOW QUALITY PROTEIN: AP-4 complex subunit mu-1-like
            [Cucumis sativus]
          Length = 451

 Score =  818 bits (2113), Expect = 0.0
 Identities = 408/451 (90%), Positives = 435/451 (96%)
 Frame = +2

Query: 83   MISQFFVLSQRGDNIVFRDYRGDVPKGSAEIFFRKVKFWKDDEEEEAPPVFNLDGVNYFH 262
            MISQFFVLSQRGDNIVFRDYRG+VPKGSAEIFFRKVKFWK+D E +APPVFNLDGVNYFH
Sbjct: 1    MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 263  VKVAGLLFLATTRVNMSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVID 442
            VKV GLLF+ATTR+N SPSLVLELLQRIARVIKDYLGVLNEDS R+NFVLVYELLDEVID
Sbjct: 61   VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVID 120

Query: 443  FGYVQTTSTELLKSYVFNEPIVVDAARLPPLGPAAMFMQGSKRMPGTAVTKSVVANEPGG 622
            FGYVQTTSTE+LKSYVFNEPIVVDAARLPPLGPA++F+QGSKRMPGTAVTKSVVANEPGG
Sbjct: 121  FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPGG 180

Query: 623  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLSIGRGGR 802
            RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALNEDLSIGRGGR
Sbjct: 181  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 803  SIYDYASSAGAGAVILDDCNFHESVHLDSFDMDRTLTLVPPDGEFPVMNYRMTQEFKPPF 982
            SIYDY+SS+G G VILDDCNFHESVHL++FD+DRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 241  SIYDYSSSSGGGTVILDDCNFHESVHLENFDIDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 983  RINALIEEAGNFKAEVILKVRAEFSSNITANTIVVQMPLPKHTTRVSFELESGAVGNTTD 1162
            RINALIEEAG+ KAEVILKVRAEF+S+ITANTI++QMPLP  TTRVSFELE GAVGNTTD
Sbjct: 301  RINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 1163 FKEANKKLEWGLKKIVGGSEHTLRAKLTFSQESHGNIMKEAGPVSMTFTIPMYNASKLQV 1342
            FKEANK+LE   KKIVGGSEHTLRA+LTFSQESHGNI+KEAGPVSMTFTIPMYNAS+LQV
Sbjct: 361  FKEANKRLEXVWKKIVGGSEHTLRARLTFSQESHGNIVKEAGPVSMTFTIPMYNASRLQV 420

Query: 1343 RYLQIAKKSKTYNPYRWVRYVTQANSYVARL 1435
            +YLQIAKKS TYNPYRWVRYVTQANSYVARL
Sbjct: 421  KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 451


>ref|XP_002302340.1| predicted protein [Populus trichocarpa] gi|222844066|gb|EEE81613.1|
            predicted protein [Populus trichocarpa]
          Length = 446

 Score =  805 bits (2079), Expect = 0.0
 Identities = 405/451 (89%), Positives = 427/451 (94%)
 Frame = +2

Query: 83   MISQFFVLSQRGDNIVFRDYRGDVPKGSAEIFFRKVKFWKDDEEEEAPPVFNLDGVNYFH 262
            MISQFFVLSQRGDNIVFRDYRG+VPKGSAEIFFRKVKFWK+D EEEAPPVFN+DGVNYFH
Sbjct: 1    MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEEEAPPVFNVDGVNYFH 60

Query: 263  VKVAGLLFLATTRVNMSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVID 442
            VKV GLLF+ATTR N+SPSLVLELLQRIARVIKDYLGVLNEDS RKNFVLVYELLDEVID
Sbjct: 61   VKVVGLLFVATTRANVSPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120

Query: 443  FGYVQTTSTELLKSYVFNEPIVVDAARLPPLGPAAMFMQGSKRMPGTAVTKSVVANEPGG 622
            FGYVQTTSTELLKSYVFNEP+VVDAARL PL PAA+FMQG+KRMPGTAVTKSVVANEPGG
Sbjct: 121  FGYVQTTSTELLKSYVFNEPLVVDAARLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGG 180

Query: 623  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLSIGRGGR 802
            RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLSIGRG  
Sbjct: 181  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLSIGRG-- 238

Query: 803  SIYDYASSAGAGAVILDDCNFHESVHLDSFDMDRTLTLVPPDGEFPVMNYRMTQEFKPPF 982
               DY SS G+G+VILDDCNFHESV LD+FD+DRTLTLVPPDGEFPVMNYRMTQEFKPPF
Sbjct: 239  ---DYRSSFGSGSVILDDCNFHESVRLDNFDLDRTLTLVPPDGEFPVMNYRMTQEFKPPF 295

Query: 983  RINALIEEAGNFKAEVILKVRAEFSSNITANTIVVQMPLPKHTTRVSFELESGAVGNTTD 1162
            RIN LIEEAG  KAEVILKV AEF S+ITANTI+VQMPLPK+TTRV+FELE GA+G TTD
Sbjct: 296  RINTLIEEAGALKAEVILKVSAEFPSSITANTIIVQMPLPKYTTRVNFELEPGALGQTTD 355

Query: 1163 FKEANKKLEWGLKKIVGGSEHTLRAKLTFSQESHGNIMKEAGPVSMTFTIPMYNASKLQV 1342
            FKEAN++LEWGLKKIVGGSEHTLRAKLTFSQE HGNI KEAGPVSMTFTIPMYNAS+LQV
Sbjct: 356  FKEANRRLEWGLKKIVGGSEHTLRAKLTFSQELHGNITKEAGPVSMTFTIPMYNASRLQV 415

Query: 1343 RYLQIAKKSKTYNPYRWVRYVTQANSYVARL 1435
            +YLQIAKKS TYNPYRWVRYVTQANSYVAR+
Sbjct: 416  KYLQIAKKSSTYNPYRWVRYVTQANSYVARI 446


>gb|ABR16746.1| unknown [Picea sitchensis]
          Length = 451

 Score =  793 bits (2048), Expect = 0.0
 Identities = 391/451 (86%), Positives = 425/451 (94%)
 Frame = +2

Query: 83   MISQFFVLSQRGDNIVFRDYRGDVPKGSAEIFFRKVKFWKDDEEEEAPPVFNLDGVNYFH 262
            MISQFFVLSQRGDNIVFRDYRG+VPKGSAEIFFR VKFWK D+ EEAPPVFN+DGVNY H
Sbjct: 1    MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRNVKFWKSDDGEEAPPVFNVDGVNYLH 60

Query: 263  VKVAGLLFLATTRVNMSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVID 442
            VKVAGLLF+ATTR+N+SP+LVLELLQRIARVIKDYLG+LNEDS RKNFVLVYELLDEVID
Sbjct: 61   VKVAGLLFVATTRINVSPALVLELLQRIARVIKDYLGILNEDSLRKNFVLVYELLDEVID 120

Query: 443  FGYVQTTSTELLKSYVFNEPIVVDAARLPPLGPAAMFMQGSKRMPGTAVTKSVVANEPGG 622
            FGY Q TSTE+LKS++FNEPIVVDA R P L PAAMFMQGSKRMPGTAVTKSVVANEPGG
Sbjct: 121  FGYPQNTSTEVLKSFIFNEPIVVDAGRGPSLSPAAMFMQGSKRMPGTAVTKSVVANEPGG 180

Query: 623  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLSIGRGGR 802
            RKREE+FVD+IEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLSIGR G 
Sbjct: 181  RKREEVFVDVIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLSIGRSGH 240

Query: 803  SIYDYASSAGAGAVILDDCNFHESVHLDSFDMDRTLTLVPPDGEFPVMNYRMTQEFKPPF 982
            S YDY+SS+GAG VILDDCNFHESV LD+FD+DRTLTLVPPDGEFPVMNYRMTQEFKPPF
Sbjct: 241  SSYDYSSSSGAGMVILDDCNFHESVRLDNFDLDRTLTLVPPDGEFPVMNYRMTQEFKPPF 300

Query: 983  RINALIEEAGNFKAEVILKVRAEFSSNITANTIVVQMPLPKHTTRVSFELESGAVGNTTD 1162
            R+NALIEEAG+ KAEV+LKVRA+FSS+ITANT+ +QMPLPK+TTRVSF+LE GAVG TTD
Sbjct: 301  RVNALIEEAGSLKAEVMLKVRADFSSSITANTVALQMPLPKYTTRVSFDLEPGAVGQTTD 360

Query: 1163 FKEANKKLEWGLKKIVGGSEHTLRAKLTFSQESHGNIMKEAGPVSMTFTIPMYNASKLQV 1342
            FKE NK LEWGL+KIVGGSEHTLRAKLTFSQE++ NI KE+GPVSMTFTIPMY+AS+LQV
Sbjct: 361  FKEGNKMLEWGLRKIVGGSEHTLRAKLTFSQETNMNITKESGPVSMTFTIPMYSASRLQV 420

Query: 1343 RYLQIAKKSKTYNPYRWVRYVTQANSYVARL 1435
            RYLQI KKS+TYNPYRWVRYVTQANSYV R+
Sbjct: 421  RYLQIVKKSRTYNPYRWVRYVTQANSYVIRI 451


Top