BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010634
         (1787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containi...   743   0.0  
emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]   743   0.0  
ref|XP_002523825.1| pentatricopeptide repeat-containing protein,...   716   0.0  
ref|XP_003603831.1| Pentatricopeptide repeat-containing protein ...   701   0.0  
ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containi...   700   0.0  

>ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Vitis vinifera]
          Length = 531

 Score =  743 bits (1919), Expect = 0.0
 Identities = 372/534 (69%), Positives = 422/534 (79%), Gaps = 8/534 (1%)
 Frame = +2

Query: 50   MAFLTSKLRLSFTSHKLSPXXXXXXXXXXXXXXXEDEND--------ANNTKLSPTETLL 205
            MA + SK+RLS   + LSP                +E D        A N  LS  ETL+
Sbjct: 1    MALVKSKVRLSLLRYSLSPVSQHSFRLYSSSSEASEEEDEVKESGNSAVNIVLSSEETLV 60

Query: 206  AEKFHTLIKDHHRXXXXXXXXXXXXXXXXXITTLSLDFSKITTTNSITPQIVKHVIEKCG 385
             EKFH+LIK H R                 I +LS DFS+I++ +S++  IV+ VIEKCG
Sbjct: 61   VEKFHSLIKSHQRKNTNPDPISPNPHYT--IASLSFDFSQISSADSVSSAIVRRVIEKCG 118

Query: 386  SIRHGIPFIQALSFFNWVTNQTQFHHCPQPYNEMIDLAGKVRHFDIAWYLIDLMKTRNVQ 565
             +RHGIPF Q L+FFNW TN  +F H P+PY EMIDLAGKVR FD+AW LIDLMKTRNV+
Sbjct: 119  GVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVE 178

Query: 566  IPVETFSILVRRYVRAGLVAEGVHAFNRMEDYGCMPDKIAFSIVISILCKKRRAEEAQSF 745
            IPVETF+ILVRRYV+AGL AE VHAFNRMEDYGC PDKIAFS+VIS L KKRRA EAQSF
Sbjct: 179  IPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSF 238

Query: 746  FDSLKDKFEPDVIIYTSLVNGWCRAGNIDQAERVFGEMKEVGIQPNVYTYSIVIDALCRC 925
            FDSLKD+FEPDV++YTSLV+GWCRAGNI +AERVFGEMK  GIQPNVYTYSIVIDALCR 
Sbjct: 239  FDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRS 298

Query: 926  GQISRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLDCPADTITY 1105
            GQI+RAHDVF+EMIDVGC PN+ITFNNLMRVHVKAGRTEKVLQVYNQMKRL CP D ITY
Sbjct: 299  GQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITY 358

Query: 1106 NFLIESRCRDDNLEEATKVLNQMVKKGCSGNASTFNPIFRCIMKLKDVNAAHRMYTKMKE 1285
            NFLIES CRDDNLEEA K+LN  VKKGC+ NAS+FNPIF CI KL DVN+AHRM+ KMK+
Sbjct: 359  NFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKD 417

Query: 1286 MKCTPNTVTYNVLMKMFAEFKSADMVFKLKQEMDENEVEPNVNTYRVLISLFCRIGHWVR 1465
            +KC PNTVTYN+LM+MFA+ KS DMV KL++EMDENE+EPN NTYRVLIS FC IGHW  
Sbjct: 418  LKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNN 477

Query: 1466 AHKFLIEMLEEKCLRPTLPMYEAVLLHLRKAKQIKKHEELVEKMVDRGFVTRPL 1627
            A+ F  EM+EEKCLRP+LP+YE VL  LRKA Q+KKHEELVEKMV+RGFVTRPL
Sbjct: 478  AYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRPL 531


>emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
          Length = 1563

 Score =  743 bits (1918), Expect = 0.0
 Identities = 372/537 (69%), Positives = 423/537 (78%), Gaps = 8/537 (1%)
 Frame = +2

Query: 41   FTSMAFLTSKLRLSFTSHKLSPXXXXXXXXXXXXXXXEDEND--------ANNTKLSPTE 196
            + SMA + SK+RLS   + LSP                +E D        A N  LS  E
Sbjct: 1030 WASMALVKSKVRLSLLRYSLSPVSQHSFRLYSSSSEASEEEDEVKESGNSAVNIVLSSEE 1089

Query: 197  TLLAEKFHTLIKDHHRXXXXXXXXXXXXXXXXXITTLSLDFSKITTTNSITPQIVKHVIE 376
            TL+ EKFH+LIK H R                 I +LS DFS+I++ +S++  IV+ VIE
Sbjct: 1090 TLVVEKFHSLIKSHQRKNTNPDPISPNPHYT--IASLSFDFSQISSADSVSSAIVRRVIE 1147

Query: 377  KCGSIRHGIPFIQALSFFNWVTNQTQFHHCPQPYNEMIDLAGKVRHFDIAWYLIDLMKTR 556
            KCG +RHGIPF Q L+FFNW TN  +F H P+PY EMIDLAGKVR FD+AW LIDLMKTR
Sbjct: 1148 KCGGVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTR 1207

Query: 557  NVQIPVETFSILVRRYVRAGLVAEGVHAFNRMEDYGCMPDKIAFSIVISILCKKRRAEEA 736
            NV+IPVETF+ILVRRYV+AGL AE VHAFNRMEDYGC PDKIAFS+VIS L KKRRA EA
Sbjct: 1208 NVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEA 1267

Query: 737  QSFFDSLKDKFEPDVIIYTSLVNGWCRAGNIDQAERVFGEMKEVGIQPNVYTYSIVIDAL 916
            QSFFDSLKD+FEPDV++YTSLV+GWCRAGNI +AERVFGEMK  GI PNVYTYSIVIDAL
Sbjct: 1268 QSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDAL 1327

Query: 917  CRCGQISRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLDCPADT 1096
            CR GQI+RAHDVF+EMIDVGC PN+ITFNNLMRVHVKAGRTEKVLQVYNQMKRL CP D 
Sbjct: 1328 CRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDA 1387

Query: 1097 ITYNFLIESRCRDDNLEEATKVLNQMVKKGCSGNASTFNPIFRCIMKLKDVNAAHRMYTK 1276
            ITYNFLIES CRDDNLEEA K+LN  VKKGC+ NAS+FNPIF CI KL DVN+AHRM+ K
Sbjct: 1388 ITYNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAK 1446

Query: 1277 MKEMKCTPNTVTYNVLMKMFAEFKSADMVFKLKQEMDENEVEPNVNTYRVLISLFCRIGH 1456
            MK++KC PNTVTYN+LM+MFA+ KS DMV KL++EMDENE+EPN NTYRVLIS FC IGH
Sbjct: 1447 MKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGH 1506

Query: 1457 WVRAHKFLIEMLEEKCLRPTLPMYEAVLLHLRKAKQIKKHEELVEKMVDRGFVTRPL 1627
            W  A+ F  EM+EEKCLRP+LP+YE VL  LRKA Q+KKHEELVEKMV+RGFVTRPL
Sbjct: 1507 WNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRPL 1563


>ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536913|gb|EEF38551.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 528

 Score =  716 bits (1848), Expect = 0.0
 Identities = 348/490 (71%), Positives = 400/490 (81%)
 Frame = +2

Query: 158  ENDANNTKLSPTETLLAEKFHTLIKDHHRXXXXXXXXXXXXXXXXXITTLSLDFSKITTT 337
            E D  N  LS  ET LA KFH+LIKDHHR                   +LSLDFS  +T+
Sbjct: 46   EEDYINPSLSFEETTLANKFHSLIKDHHRRNPNFSLPNTPSH------SLSLDFSHFSTS 99

Query: 338  NSITPQIVKHVIEKCGSIRHGIPFIQALSFFNWVTNQTQFHHCPQPYNEMIDLAGKVRHF 517
              ++P +V HVIEKC ++RHGIPF QALSFFNW T++  F H P+PYNEMIDLAGKVR+F
Sbjct: 100  -PVSPSLVSHVIEKCAAVRHGIPFFQALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNF 158

Query: 518  DIAWYLIDLMKTRNVQIPVETFSILVRRYVRAGLVAEGVHAFNRMEDYGCMPDKIAFSIV 697
            D+ W +IDLMK RNV+I +ETFSIL+RRYVRAGL +E VHAFNRMEDY C PDKIAFSI+
Sbjct: 159  DLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSIL 218

Query: 698  ISILCKKRRAEEAQSFFDSLKDKFEPDVIIYTSLVNGWCRAGNIDQAERVFGEMKEVGIQ 877
            ISILC+KRRA EAQSFFDSLKDKFEPDVI+YT+LV GWCRAGNI +AERVF EMK  G  
Sbjct: 219  ISILCRKRRATEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCM 278

Query: 878  PNVYTYSIVIDALCRCGQISRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQV 1057
            PNVYTY+IVIDALCRCGQI+RAHDVFAEM+DVGC PNSITFNNL+RVHVKAGRTEKVLQV
Sbjct: 279  PNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQV 338

Query: 1058 YNQMKRLDCPADTITYNFLIESRCRDDNLEEATKVLNQMVKKGCSGNASTFNPIFRCIMK 1237
            YNQMKR+ CP DT+TYNFLIES C+D NL+EA KVLN MVKKGCS NASTFN +F  I K
Sbjct: 339  YNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAK 398

Query: 1238 LKDVNAAHRMYTKMKEMKCTPNTVTYNVLMKMFAEFKSADMVFKLKQEMDENEVEPNVNT 1417
            L+DVN AHR+Y KMKE+KC  NTVTYN+LM+MF + KS DMV KLK+EMDE++VEPNVNT
Sbjct: 399  LRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNT 458

Query: 1418 YRVLISLFCRIGHWVRAHKFLIEMLEEKCLRPTLPMYEAVLLHLRKAKQIKKHEELVEKM 1597
            Y VLI+++C +GHW  A+KF  EM+EEKCL+P+LP+YE VL  LRKA Q+KKHEELV  M
Sbjct: 459  YCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQLKKHEELVAVM 518

Query: 1598 VDRGFVTRPL 1627
            VDRGF TRPL
Sbjct: 519  VDRGFATRPL 528


>ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355492879|gb|AES74082.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 530

 Score =  701 bits (1808), Expect = 0.0
 Identities = 348/533 (65%), Positives = 412/533 (77%), Gaps = 7/533 (1%)
 Frame = +2

Query: 50   MAFLTSKLRLSFTSHKLSPXXXXXXXXXXXXXXXE--DENDAN----NTKLSPTETLLAE 211
            MAF+ S++      H LSP                  D ND N    NT LSP +T + +
Sbjct: 1    MAFIKSRVNFHL-HHSLSPFLPHTFRLCSSSPLVSEHDTNDNNTTPQNTNLSPEDTHIVD 59

Query: 212  KFHTLIKDHHRXXXXXXXXXXXXXXXXXITTLSLDFSKITTTNSITPQIVKHVIEKCGSI 391
            KFHT+IKDH+R                 I  LS++FSKI+T  S++P I +  IEKC  +
Sbjct: 60   KFHTIIKDHYRKNPNPNAVSPSLNLS--IPDLSIEFSKISTVYSVSPSITRRAIEKCSGV 117

Query: 392  RHGIPFIQALSFFNWVTNQTQFHHCPQPYNEMIDLAGKVRHFDIAWYLIDLMKTRNVQIP 571
            RHGIPF+Q+L+FFNW T    F   P+PYNEMIDLAGK+RHFD+AW+LIDLMK+R V+I 
Sbjct: 118  RHGIPFLQSLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRIT 177

Query: 572  VETFSILVRRYVRAGLVAEGVHAFNRMEDYGCMPDKIAFSIVISILCKKRRAEEAQSFFD 751
            V TFS+LVRRYVRAGL AE VHAFNRMEDYGC PDK++FSIVIS LCKKRRA EA+ FFD
Sbjct: 178  VSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFD 237

Query: 752  SLKDKFEPDVIIYTSLVNGWCRAGNIDQAERVFGEMKEVGIQPNVYTYSIVIDALCRCGQ 931
            SLK KFEPDVI+YTSLV+GWCRAG+I +AE VF +MKE G++PNVYTYSIVID+LCRCGQ
Sbjct: 238  SLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQ 297

Query: 932  ISRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLDCPADTITYNF 1111
            I+RAHDVF+EMID GC PN++TFN+LMRVHVKAGRTEKVLQVYNQMKRL C ADTI+YNF
Sbjct: 298  ITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNF 357

Query: 1112 LIESRCRDDNLEEATKVLNQMVKKGCSGNASTFNPIFRCIMKLKDVNAAHRMYTKMKEMK 1291
            LIES C+D+NL+EA KVL+ MVKKG + NASTFN IF CI +L DVN AHRMY KMKE+K
Sbjct: 358  LIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELK 417

Query: 1292 CTPNTVTYNVLMKMFAEFKSADMVFKLKQEMDENEVEPNVNTYRVLISLFCRIGHWVRAH 1471
            C PNT+TYN+LM+MFA+ KS DMV KLK+EMDE+EVEPNVNTYR+LI +FC  GHW  A+
Sbjct: 418  CMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAY 477

Query: 1472 KFLIEMLEEKCLRPTLPMYEAVLLHLRKAKQIKKHEELVEKMVDRGFVT-RPL 1627
              + EM+EEKCL+P L +YE VL  LR A Q+KKHEELVEKMV RGFV+ RPL
Sbjct: 478  NLMKEMVEEKCLKPNLSIYETVLELLRNAGQLKKHEELVEKMVARGFVSPRPL 530


>ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Glycine max]
          Length = 564

 Score =  700 bits (1806), Expect = 0.0
 Identities = 334/485 (68%), Positives = 395/485 (81%)
 Frame = +2

Query: 173  NTKLSPTETLLAEKFHTLIKDHHRXXXXXXXXXXXXXXXXXITTLSLDFSKITTTNSITP 352
            N  LSP ET LA+KFH  IK+HHR                 I  LSL FS I+  + I+P
Sbjct: 80   NPNLSPEETTLADKFHAAIKEHHRRNPTPNPNAPPPTPNLTIPDLSLAFSAISAAHPISP 139

Query: 353  QIVKHVIEKCGSIRHGIPFIQALSFFNWVTNQTQFHHCPQPYNEMIDLAGKVRHFDIAWY 532
             +   VIEKCG +RHGIPF+Q+L+FFNW ++   F   P+PYNEM+DLAGK+R FD+AW+
Sbjct: 140  SVAHRVIEKCGGVRHGIPFLQSLAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWH 199

Query: 533  LIDLMKTRNVQIPVETFSILVRRYVRAGLVAEGVHAFNRMEDYGCMPDKIAFSIVISILC 712
            +IDLMK+R V+I V TFS LVRRYVRAGL AE VHAFNRMEDYGC PD +AFSIVIS LC
Sbjct: 200  VIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLC 259

Query: 713  KKRRAEEAQSFFDSLKDKFEPDVIIYTSLVNGWCRAGNIDQAERVFGEMKEVGIQPNVYT 892
            KKRRA EAQSFFDSLK +FEPDV++YTSLV+GWCRAG+I +AE VF +MK  GI+PNVYT
Sbjct: 260  KKRRANEAQSFFDSLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYT 319

Query: 893  YSIVIDALCRCGQISRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMK 1072
            YSIVID+LCRCGQI+RAHDVF+EMID GC PN++TFN+LMRVHVKAGRTEKVL+VYNQMK
Sbjct: 320  YSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMK 379

Query: 1073 RLDCPADTITYNFLIESRCRDDNLEEATKVLNQMVKKGCSGNASTFNPIFRCIMKLKDVN 1252
            RL CPADTI+YNF+IES CRD+NLEEA K+LN MVKKG + NASTFN IF CI KL DVN
Sbjct: 380  RLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVN 439

Query: 1253 AAHRMYTKMKEMKCTPNTVTYNVLMKMFAEFKSADMVFKLKQEMDENEVEPNVNTYRVLI 1432
             AHRMY +MKE+ C PNT+TYN+LM+MFAE +S DMV K+K+EMDE++VEPNVNTYR+LI
Sbjct: 440  GAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILI 499

Query: 1433 SLFCRIGHWVRAHKFLIEMLEEKCLRPTLPMYEAVLLHLRKAKQIKKHEELVEKMVDRGF 1612
            S+FC + HW  A+K ++EM+EEKCLRP L +YE VL  LRKA Q+KKHEELV+KMV RGF
Sbjct: 500  SMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKHEELVDKMVARGF 559

Query: 1613 VTRPL 1627
            VTRPL
Sbjct: 560  VTRPL 564