BLASTX nr result

ID: Coptis21_contig00010632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010632
         (1163 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519373.1| leucine-rich repeat containing protein, puta...    65   2e-08
ref|XP_003634804.1| PREDICTED: putative disease resistance prote...    64   7e-08
emb|CBI21729.3| unnamed protein product [Vitis vinifera]               64   9e-08
emb|CAN74365.1| hypothetical protein VITISV_002581 [Vitis vinifera]    64   9e-08
ref|XP_002265285.2| PREDICTED: putative disease resistance prote...    63   1e-07

>ref|XP_002519373.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223541440|gb|EEF42990.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1208

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 43/120 (35%), Positives = 53/120 (44%)
 Frame = +3

Query: 93  MAEGVAFGLVENVLTELGSRAIQEIGSAMGVKKELKKLGRTLSTIKGVLLHAXXXXXXXX 272
           MAE V FG+  N+L  LGS   QEIG+  GVKK+L+KL  TLSTIK  LL A        
Sbjct: 1   MAEAVPFGIATNILMNLGSSTFQEIGATYGVKKDLRKLENTLSTIKAALLDAEERQEKSH 60

Query: 273 XXXXXXXXIKDAVYXXXXXXXXXXXXXLRKRLVMQDSDVNMVHAGVYFGFMAPVNDLFSM 452
                   +KD VY             L ++L     D     A         V++ FSM
Sbjct: 61  LVQDWIRKLKDVVYDADDVLDSFATKALSRQL-----DTTTAAAAAGIRIKEQVSEFFSM 115


>ref|XP_003634804.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 576

 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 42/110 (38%), Positives = 52/110 (47%)
 Frame = +3

Query: 93  MAEGVAFGLVENVLTELGSRAIQEIGSAMGVKKELKKLGRTLSTIKGVLLHAXXXXXXXX 272
           MAE + F  + NVLT+LGS A Q+IGSA  V KEL KL + L TIKGVL+ A        
Sbjct: 1   MAEQIPFNTIANVLTKLGSSAFQQIGSAFDVTKELTKLTKKLHTIKGVLVDAEKRQEESD 60

Query: 273 XXXXXXXXIKDAVYXXXXXXXXXXXXXLRKRLVMQDSDVNMVHAGVYFGF 422
                   +KD VY             L++ +  Q SD       V F F
Sbjct: 61  AVKAWVRRLKDVVYDADDLLDDFETLQLQRGVARQVSDFFSSSNQVVFRF 110


>emb|CBI21729.3| unnamed protein product [Vitis vinifera]
          Length = 1413

 Score = 63.5 bits (153), Expect = 9e-08
 Identities = 32/53 (60%), Positives = 40/53 (75%)
 Frame = +3

Query: 90  KMAEGVAFGLVENVLTELGSRAIQEIGSAMGVKKELKKLGRTLSTIKGVLLHA 248
           KMA+ + FG+VE++LT+LGS+A QEIGS  GV KE+ KL   L  IKGVLL A
Sbjct: 41  KMADQIPFGVVEHILTKLGSKAFQEIGSMYGVPKEMTKLKDNLDVIKGVLLDA 93


>emb|CAN74365.1| hypothetical protein VITISV_002581 [Vitis vinifera]
          Length = 993

 Score = 63.5 bits (153), Expect = 9e-08
 Identities = 35/74 (47%), Positives = 44/74 (59%)
 Frame = +3

Query: 93  MAEGVAFGLVENVLTELGSRAIQEIGSAMGVKKELKKLGRTLSTIKGVLLHAXXXXXXXX 272
           MAE + F +   +LT+LGS A+QEI  A GV++ELKKLG TL+TIK VLL A        
Sbjct: 1   MAEQIPFSIAGEILTKLGSLAVQEIELACGVREELKKLGDTLTTIKAVLLDAEERQEREH 60

Query: 273 XXXXXXXXIKDAVY 314
                    KDA+Y
Sbjct: 61  AVENWARRFKDAIY 74


>ref|XP_002265285.2| PREDICTED: putative disease resistance protein RGA1-like [Vitis
           vinifera]
          Length = 1467

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 35/74 (47%), Positives = 43/74 (58%)
 Frame = +3

Query: 93  MAEGVAFGLVENVLTELGSRAIQEIGSAMGVKKELKKLGRTLSTIKGVLLHAXXXXXXXX 272
           MAE + F  + +VLT+LGS A Q+IGSA GV KEL KL + L TIKGVL+ A        
Sbjct: 1   MAEQIPFSTIADVLTKLGSSAFQQIGSAFGVTKELTKLTKKLDTIKGVLVDAEKRQEESD 60

Query: 273 XXXXXXXXIKDAVY 314
                   +KD VY
Sbjct: 61  AVKAWVRRLKDVVY 74


Top