BLASTX nr result

ID: Coptis21_contig00010610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010610
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37979.3| unnamed protein product [Vitis vinifera]              134   2e-29
ref|XP_002269318.1| PREDICTED: probable polyprenol reductase 2-l...   134   2e-29
ref|XP_002270436.1| PREDICTED: probable polyprenol reductase 2 [...   117   3e-24
emb|CAN70612.1| hypothetical protein VITISV_004839 [Vitis vinifera]   117   3e-24
ref|XP_002313005.1| predicted protein [Populus trichocarpa] gi|2...   112   7e-23

>emb|CBI37979.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  134 bits (337), Expect = 2e-29
 Identities = 79/174 (45%), Positives = 91/174 (52%)
 Frame = +3

Query: 276 MELEIDKLLRAAWIAGIFPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 455
           MEL++  LLRAAWIAG  PIL                                       
Sbjct: 1   MELDLVALLRAAWIAGTLPILIASIPSSRLHSFHGLVLGFARRGKTMPSSSY-------- 52

Query: 456 XXXXXXXXXAYKKFTVPQRFFLHFYXXXXXXXXXXXXXXXXYACKMVPLGNQPLHYSTIS 635
                       KFTVPQRFF HFY                YA +M PL ++PL YST++
Sbjct: 53  ------------KFTVPQRFFCHFYVVAVVWTTLLVLATLLYAYRMAPLVSEPLLYSTVA 100

Query: 636 SHLTGGSHIFSMHKSHSTPLERRDTVWRTVLLLLLMEVQVWRRLFETLYVFSYS 797
           S LTGGSHIFS+HKS STPLE R  VWR+V LLLLMEVQV RRL+ET+YVF+YS
Sbjct: 101 SQLTGGSHIFSLHKSRSTPLEHRYLVWRSVFLLLLMEVQVMRRLYETIYVFNYS 154


>ref|XP_002269318.1| PREDICTED: probable polyprenol reductase 2-like [Vitis vinifera]
          Length = 338

 Score =  134 bits (337), Expect = 2e-29
 Identities = 79/174 (45%), Positives = 91/174 (52%)
 Frame = +3

Query: 276 MELEIDKLLRAAWIAGIFPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 455
           MEL++  LLRAAWIAG  PIL                                       
Sbjct: 1   MELDLVALLRAAWIAGTLPILIASIPSSRLHSFHGLVLGFARRGKTMPSSSY-------- 52

Query: 456 XXXXXXXXXAYKKFTVPQRFFLHFYXXXXXXXXXXXXXXXXYACKMVPLGNQPLHYSTIS 635
                       KFTVPQRFF HFY                YA +M PL ++PL YST++
Sbjct: 53  ------------KFTVPQRFFCHFYVVAVVWTTLLVLATLLYAYRMAPLVSEPLLYSTVA 100

Query: 636 SHLTGGSHIFSMHKSHSTPLERRDTVWRTVLLLLLMEVQVWRRLFETLYVFSYS 797
           S LTGGSHIFS+HKS STPLE R  VWR+V LLLLMEVQV RRL+ET+YVF+YS
Sbjct: 101 SQLTGGSHIFSLHKSRSTPLEHRYLVWRSVFLLLLMEVQVMRRLYETIYVFNYS 154


>ref|XP_002270436.1| PREDICTED: probable polyprenol reductase 2 [Vitis vinifera]
           gi|297735038|emb|CBI17400.3| unnamed protein product
           [Vitis vinifera]
          Length = 336

 Score =  117 bits (293), Expect = 3e-24
 Identities = 73/174 (41%), Positives = 84/174 (48%)
 Frame = +3

Query: 276 MELEIDKLLRAAWIAGIFPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 455
           ME+ +  LLRAAWIAG  PIL                                       
Sbjct: 1   MEVGLAWLLRAAWIAGTLPILVASIPSSRLSPVHGVLSGFASRGKTLQS----------- 49

Query: 456 XXXXXXXXXAYKKFTVPQRFFLHFYXXXXXXXXXXXXXXXXYACKMVPLGNQPLHYSTIS 635
                    + +K TVPQ FF HFY                YA KM PL +  L YSTI+
Sbjct: 50  ---------SSQKLTVPQSFFSHFYLVAVVWTTILLLATWYYAYKMAPLDSVSLDYSTIA 100

Query: 636 SHLTGGSHIFSMHKSHSTPLERRDTVWRTVLLLLLMEVQVWRRLFETLYVFSYS 797
           SHLTGGSHI S+HKS ST  + R  VWR V LLLLME+ V RRL+ETLYVF+YS
Sbjct: 101 SHLTGGSHILSLHKSRSTSAQHRYRVWRPVFLLLLMELHVMRRLYETLYVFNYS 154


>emb|CAN70612.1| hypothetical protein VITISV_004839 [Vitis vinifera]
          Length = 385

 Score =  117 bits (293), Expect = 3e-24
 Identities = 75/174 (43%), Positives = 86/174 (49%)
 Frame = +3

Query: 276 MELEIDKLLRAAWIAGIFPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 455
           ME+ +  LLRAAWIAG  PIL                                       
Sbjct: 50  MEVGLAWLLRAAWIAGTLPILVASIPSSRLSPVHGVLSGFASRGKTXQS----------- 98

Query: 456 XXXXXXXXXAYKKFTVPQRFFLHFYXXXXXXXXXXXXXXXXYACKMVPLGNQPLHYSTIS 635
                    + +K TVPQ FF HFY                YA KM PL +  L YSTI+
Sbjct: 99  ---------SSQKLTVPQSFFSHFYLVAVVWTTILLLATXYYAYKMAPLDSVSLDYSTIA 149

Query: 636 SHLTGGSHIFSMHKSHSTPLERRDTVWRTVLLLLLMEVQVWRRLFETLYVFSYS 797
           SHLTGGSHI S+HKS ST  + R  VWR V LLLLME+ V RRL+ETLYVF+YS
Sbjct: 150 SHLTGGSHILSLHKSRSTSAQHRYRVWRPVFLLLLMELHVMRRLYETLYVFNYS 203


>ref|XP_002313005.1| predicted protein [Populus trichocarpa] gi|222849413|gb|EEE86960.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score =  112 bits (281), Expect = 7e-23
 Identities = 69/174 (39%), Positives = 84/174 (48%)
 Frame = +3

Query: 276 MELEIDKLLRAAWIAGIFPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 455
           MEL + +LLRAAWIAG  PIL                                       
Sbjct: 1   MELGLVELLRAAWIAGTLPILIASLPCSWLGSFHGLVLGFARRGKIMQSS---------- 50

Query: 456 XXXXXXXXXAYKKFTVPQRFFLHFYXXXXXXXXXXXXXXXXYACKMVPLGNQPLHYSTIS 635
                    +++KFTVPQRFF HFY                YA +M P+ ++P  YS + 
Sbjct: 51  ---------SHRKFTVPQRFFTHFYVVAVAWTTLLLLGTSIYAYRMTPIVSEPFFYSDLG 101

Query: 636 SHLTGGSHIFSMHKSHSTPLERRDTVWRTVLLLLLMEVQVWRRLFETLYVFSYS 797
           S+L G S+IFS H+S    LE R  VW +V LLLLMEVQV RRLFET YVF+YS
Sbjct: 102 SYLAGRSNIFSFHRSRLMSLENRYRVWHSVFLLLLMEVQVSRRLFETAYVFNYS 155


Top