BLASTX nr result

ID: Coptis21_contig00010597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010597
         (2058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30150.3| unnamed protein product [Vitis vinifera]              513   e-143
ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...   483   e-134
ref|XP_002326378.1| predicted protein [Populus trichocarpa] gi|2...   479   e-133
ref|XP_002316395.1| predicted protein [Populus trichocarpa] gi|2...   460   e-127
ref|XP_002519475.1| protein binding protein, putative [Ricinus c...   458   e-126

>emb|CBI30150.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  513 bits (1321), Expect = e-143
 Identities = 270/552 (48%), Positives = 365/552 (66%), Gaps = 4/552 (0%)
 Frame = -3

Query: 1840 ITTREEASSSSSLEKTIGSQS---SEVDTACCAICMDSWSSQGKHQVCCLPCGHVYGFSC 1670
            I+    +SSS+  E   GS      ++D  CC ICM++W+S G+HQVCCLPCGH+YG SC
Sbjct: 78   ISAMGSSSSSNGGETQEGSDGWVQDQIDGLCCPICMEAWTSGGEHQVCCLPCGHIYGISC 137

Query: 1669 IEKWIRQCNKKYAAKCPQCSKNCGVKDIIKLYVSQIAVVDGEEQKKFLSLQAENEFLKMK 1490
            I+KW +QC +  + KCPQC + C ++++  LY S++  VD + +KK  SL+A+   L+ K
Sbjct: 138  IKKWFQQCGRS-SGKCPQCKRKCTLRNVRTLYASRVVAVDEDLRKKIRSLEAKCASLEKK 196

Query: 1489 IAALHEKICQDEEEKMCEAASLLENVTSGEMRLGTSEMNVTSGQMRLGTSEILTCVGDPQ 1310
             A      C  E +     A L   V     R  T+ +   S +M    S ++   G   
Sbjct: 197  NADW----CMKESDWHKREADLHLQVQQLIER--TTYLERLSSEMHGRGSGLVAARG--- 247

Query: 1309 RQRLSEHTLGSRYGAQGSNCCRFALEDELVLEGAKIMDIDASNQILILARCLPGMGGNHV 1130
                  H     +G +GS+C  F L+ EL ++GA+  DIDAS +IL++AR L G GG HV
Sbjct: 248  ------HNFAENFGRRGSSC-NFVLQKELQVDGARYFDIDASGEILVIARRLSGTGGTHV 300

Query: 1129 LTKISLMYPYDSENIQLPVTTKNVKDLHVSPYGSKHALFASLGKKLSVLSMESNNIVVTY 950
            LTK+SL+ P++ E+I LP  TK VKDL VSP   + AL ASLGKKLSVLSMESNN+++TY
Sbjct: 301  LTKMSLISPHEIEDILLPSGTKAVKDLRVSPAKCRLALLASLGKKLSVLSMESNNVILTY 360

Query: 949  DLPGPAWSCSWDLNSPHYLYAGLQNGMLLVFDMRHATNPLESLTGLKPQPLHTIHSILHK 770
            DLP  AWSCSWDLNS HY+YAGLQNGML+VFDMR    P+  ++G    P+HTI S+LH 
Sbjct: 361  DLPTAAWSCSWDLNSSHYMYAGLQNGMLMVFDMRQTARPMAEISGPTSNPIHTIQSVLHN 420

Query: 769  SPSPSDVRTLLTASAIGPCVWNTGAAGERPFLIPELENQGVCVSVACCPSSDDIVASFRP 590
            S  PS V TLL+AS++G C WN G + ERPFL+PE +N GVC+S+A CPSSD+IV++FRP
Sbjct: 421  STLPSGVSTLLSASSVGLCQWNFGGSEERPFLVPETKNHGVCISLAHCPSSDNIVSTFRP 480

Query: 589  -VQTSNDIISSQSPLTPSPTVGGRGIQGSHVLIKRLVGNCYQNVACTSANVNDVRFLKSA 413
             V+ SN+I  SQ  LTPS  V G+G+QGSHVL+KR+ GNCYQ +  + ANVND+R  +SA
Sbjct: 481  KVEMSNEIAVSQYSLTPS--VMGQGMQGSHVLLKRVGGNCYQKLGSSCANVNDIRLQRSA 538

Query: 412  VVNMENCNPLFACGDESTQGLSVYELPSLGILQNLKPHHNPILDVKFAPTPGSGILGCIS 233
            ++++++ +PLF  GDE T  L + ELPSL + Q LK   +P+ DVK++      +L C+S
Sbjct: 539  IIDLQSHHPLFVSGDEITHELVLQELPSLRVSQRLKSQKHPLRDVKYSHDLSPSLLCCLS 598

Query: 232  KDRLQVFSAKVS 197
            +D LQ FSAK S
Sbjct: 599  EDTLQFFSAKFS 610


>ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Vitis vinifera]
          Length = 567

 Score =  483 bits (1244), Expect = e-134
 Identities = 256/552 (46%), Positives = 348/552 (63%), Gaps = 4/552 (0%)
 Frame = -3

Query: 1840 ITTREEASSSSSLEKTIGSQS---SEVDTACCAICMDSWSSQGKHQVCCLPCGHVYGFSC 1670
            I+    +SSS+  E   GS      ++D  CC ICM++W+S G+HQVCCLPCGH+YG SC
Sbjct: 78   ISAMGSSSSSNGGETQEGSDGWVQDQIDGLCCPICMEAWTSGGEHQVCCLPCGHIYGISC 137

Query: 1669 IEKWIRQCNKKYAAKCPQCSKNCGVKDIIKLYVSQIAVVDGEEQKKFLSLQAENEFLKMK 1490
            I+KW +QC +  + KCPQC + C ++++  LY S++  VD              E L+ K
Sbjct: 138  IKKWFQQCGRS-SGKCPQCKRKCTLRNVRTLYASRVVAVD--------------EDLRKK 182

Query: 1489 IAALHEKICQDEEEKMCEAASLLENVTSGEMRLGTSEMNVTSGQMRLGTSEILTCVGDPQ 1310
            I +L  K C   E+K            + +  +  S+ +     + L   +++       
Sbjct: 183  IRSLEAK-CASLEKK------------NADWCMKESDWHKREADLHLQVQQLI------- 222

Query: 1309 RQRLSEHTLGSRYGAQGSNCCRFALEDELVLEGAKIMDIDASNQILILARCLPGMGGNHV 1130
                                     E EL ++GA+  DIDAS +IL++AR L G GG HV
Sbjct: 223  -------------------------EKELQVDGARYFDIDASGEILVIARRLSGTGGTHV 257

Query: 1129 LTKISLMYPYDSENIQLPVTTKNVKDLHVSPYGSKHALFASLGKKLSVLSMESNNIVVTY 950
            LTK+SL+ P++ E+I LP  TK VKDL VSP   + AL ASLGKKLSVLSMESNN+++TY
Sbjct: 258  LTKMSLISPHEIEDILLPSGTKAVKDLRVSPAKCRLALLASLGKKLSVLSMESNNVILTY 317

Query: 949  DLPGPAWSCSWDLNSPHYLYAGLQNGMLLVFDMRHATNPLESLTGLKPQPLHTIHSILHK 770
            DLP  AWSCSWDLNS HY+YAGLQNGML+VFDMR    P+  ++G    P+HTI S+LH 
Sbjct: 318  DLPTAAWSCSWDLNSSHYMYAGLQNGMLMVFDMRQTARPMAEISGPTSNPIHTIQSVLHN 377

Query: 769  SPSPSDVRTLLTASAIGPCVWNTGAAGERPFLIPELENQGVCVSVACCPSSDDIVASFRP 590
            S  PS V TLL+AS++G C WN G + ERPFL+PE +N GVC+S+A CPSSD+IV++FRP
Sbjct: 378  STLPSGVSTLLSASSVGLCQWNFGGSEERPFLVPETKNHGVCISLAHCPSSDNIVSTFRP 437

Query: 589  -VQTSNDIISSQSPLTPSPTVGGRGIQGSHVLIKRLVGNCYQNVACTSANVNDVRFLKSA 413
             V+ SN+I  SQ  LTPS  V G+G+QGSHVL+KR+ GNCYQ +  + ANVND+R  +SA
Sbjct: 438  KVEMSNEIAVSQYSLTPS--VMGQGMQGSHVLLKRVGGNCYQKLGSSCANVNDIRLQRSA 495

Query: 412  VVNMENCNPLFACGDESTQGLSVYELPSLGILQNLKPHHNPILDVKFAPTPGSGILGCIS 233
            ++++++ +PLF  GDE T  L + ELPSL + Q LK   +P+ DVK++      +L C+S
Sbjct: 496  IIDLQSHHPLFVSGDEITHELVLQELPSLRVSQRLKSQKHPLRDVKYSHDLSPSLLCCLS 555

Query: 232  KDRLQVFSAKVS 197
            +D LQ FSAK S
Sbjct: 556  EDTLQFFSAKFS 567


>ref|XP_002326378.1| predicted protein [Populus trichocarpa] gi|222833571|gb|EEE72048.1|
            predicted protein [Populus trichocarpa]
          Length = 681

 Score =  479 bits (1234), Expect = e-133
 Identities = 265/559 (47%), Positives = 365/559 (65%), Gaps = 5/559 (0%)
 Frame = -3

Query: 1858 GQDDVGITTREEASSSSSLEKTIGSQSSEVDTACCAICMDSWSSQGKHQVCCLPCGHVYG 1679
            G DD G     E+S +S   +      SE D   C ICM++W+++G H +CCLPCGH++G
Sbjct: 150  GGDDAG----GESSQNSQWNR------SEFDGLFCPICMEAWTNEGDHHICCLPCGHLFG 199

Query: 1678 FSCIEKWIRQCNKKYAAKCPQCSKNCGVKDIIKLYVSQIAVVDGEEQKKFLSLQAENEFL 1499
             SCIEKW+RQ  +   AKCPQC++   ++DI KL+V +IAVVD E QK+         FL
Sbjct: 200  LSCIEKWLRQRGR--LAKCPQCNRKGTLRDIRKLFVPRIAVVDEESQKRI-------RFL 250

Query: 1498 KMKIAALHEK---ICQDEEE-KMCEAASLLENVTSGEMRLGTSEMNVTSGQMRLGTSEIL 1331
            + K A+L +K   +C+ E E K  EAA  LE     E  +    +    G ++   S + 
Sbjct: 251  EEKCASLVKKDVDLCKKESEWKRREAALQLEVQKCKERTIYLEHL---LGDLQSRPSGVA 307

Query: 1330 TCVGDPQRQRLSEHTLGSRYGAQGSNCCRFALEDELVLEGAKIMDIDASNQILILARCLP 1151
            T     Q      +++ S +  QGS+ C F L+ EL ++GA++ D+DAS +IL+L R +P
Sbjct: 308  TAYRGSQGHEFG-NSIYSDFNRQGSSSC-FMLQRELRVDGARLFDVDASGKILLLVRRVP 365

Query: 1150 GMGGNHVLTKISLMYPYDSENIQLPVTTKNVKDLHVSPYGSKHALFASLGKKLSVLSMES 971
             MGG+HVLTK+SL+ P++SE+I LP  TK +KDLH+SP     ALFASLGKKLSVLSMES
Sbjct: 366  MMGGSHVLTKMSLIPPHESEDIFLPPATKIIKDLHISPTNGSLALFASLGKKLSVLSMES 425

Query: 970  NNIVVTYDLPGPAWSCSWDLNSPHYLYAGLQNGMLLVFDMRHATNPLESLTGLKPQPLHT 791
            NN++++YDLP  AWSCSWDLN  HY+YAGLQNG LLVFDMR   +P+ES  G    P+HT
Sbjct: 426  NNVILSYDLPAAAWSCSWDLNCSHYVYAGLQNGSLLVFDMRITGSPVESRLGHTTDPIHT 485

Query: 790  IHSILHKSPSPSDVRTLLTASAIGPCVWNTGAAGERPFLIPELENQGVCVSVACCPSSDD 611
            + S+ H S  PS V+T+++AS++G C WN G   ERPFLIPE  NQGVCVS+A C SSDD
Sbjct: 486  VQSLQHISTLPSGVKTVVSASSVGMCQWNFGGEEERPFLIPETTNQGVCVSLAYCASSDD 545

Query: 610  IVASFRP-VQTSNDIISSQSPLTPSPTVGGRGIQGSHVLIKRLVGNCYQNVACTSANVND 434
            IV S+RP V+ SN+++ SQ+   PS    G+G+ GSH+ +KR  G+ Y+ +    + V+ 
Sbjct: 546  IVVSYRPRVEMSNEVV-SQTLFKPS-LATGQGVLGSHLHLKR-AGSNYEKLGIACSTVSG 602

Query: 433  VRFLKSAVVNMENCNPLFACGDESTQGLSVYELPSLGILQNLKPHHNPILDVKFAPTPGS 254
            +R  KS++++ +N  PLFA GDE + GL + ELPS    Q LK H + I DVK+  T   
Sbjct: 603  IRLPKSSIIDRQNQKPLFATGDEVSCGLILQELPSFTATQRLKSHQHFIYDVKYTSTHSQ 662

Query: 253  GILGCISKDRLQVFSAKVS 197
            G+LGC+S+D +Q+FS K+S
Sbjct: 663  GLLGCLSEDTVQLFSTKLS 681


>ref|XP_002316395.1| predicted protein [Populus trichocarpa] gi|222865435|gb|EEF02566.1|
            predicted protein [Populus trichocarpa]
          Length = 605

 Score =  460 bits (1184), Expect = e-127
 Identities = 261/598 (43%), Positives = 365/598 (61%), Gaps = 2/598 (0%)
 Frame = -3

Query: 1987 VPIIRTDNNATTTSPNTRFNSSRILLHDDDEQVQLQQTTFTVAGQDDVGITTRE-EASSS 1811
            VP +   + ++TT  +   ++  ++  +  E  +       +  +D   +T +E E +  
Sbjct: 43   VPFMFRSSRSSTTYGDGDQSTPMVIDSESVEGGERGSNERRIEERDGFSLTRKENEGTVE 102

Query: 1810 SSLEKTIGSQSSEVDTACCAICMDSWSSQGKHQVCCLPCGHVYGFSCIEKWIRQCNKKYA 1631
             +  +    +  ++D   CAICM+ W S+G HQV CLPCGH+YGFSCI KW+++      
Sbjct: 103  EAKRREDTVEEYDLDGLNCAICMEPWRSEGDHQVSCLPCGHLYGFSCISKWLQR--PVPT 160

Query: 1630 AKCPQCSKNCGVKDIIKLYVSQIAVVDGEEQKKFLSLQAENEFLKMKIAALHEKICQDEE 1451
             KCPQC+  C  KDI KLY + + V+D   QKK  SL+ E   LK +  A  E       
Sbjct: 161  TKCPQCNAKCKFKDIRKLYTTPVVVIDEGLQKKVESLEDEIGSLKTEKPACTEN------ 214

Query: 1450 EKMCEAASLLENVTSGEMRLGTSEMNVTSGQMRLGTSEILTCVGDPQRQRLSEHTLGSRY 1271
                         TS E ++G+      + +   G                S  + GS Y
Sbjct: 215  -------------TSFE-QMGSKPHQFFNAKEAQGAQ--------------SGCSFGS-Y 245

Query: 1270 GAQGSNCCRFALEDELVLEGAKIMDIDASNQILILARCLPGMGGNHVLTKISLMYPYDSE 1091
             ++    C F L+ EL +EG ++  +D S Q LIL R + GMGG H+L KI+L+ P ++E
Sbjct: 246  SSKQLLHCNFKLQHELAIEGGRLFAMDFSYQNLILTRRIAGMGGMHMLNKINLINPRENE 305

Query: 1090 NIQLPVTTKNVKDLHVSPYGSKHALFASLGKKLSVLSMESNNIVVTYDLPGPAWSCSWDL 911
            +IQLP +TK VKD+ +SP G K  L ASLGKKLS+LSMESNNIVVTY+L  PAWSCSWDL
Sbjct: 306  DIQLPPSTKAVKDIQISPCG-KLTLLASLGKKLSILSMESNNIVVTYNLRVPAWSCSWDL 364

Query: 910  NSPHYLYAGLQNGMLLVFDMRHATNPLESLTGLKPQPLHTIHSILHKSPSPSDVRTLLTA 731
            NSPHY+YAGLQNGMLLVFDMR   NPL+S+ G    P+HT+H +       S+ + LLTA
Sbjct: 365  NSPHYVYAGLQNGMLLVFDMRGTLNPLQSMVGPVLGPIHTMHPLAQNPVLGSNSQKLLTA 424

Query: 730  SAIGPCVWNTGAAGERPFLIPELENQGVCVSVACCPSSDDIVASFRP-VQTSNDIISSQS 554
            S++GPCVWNT  AG+RPFL+P  ENQG+C S+A  P SDDIVAS+ P  + SN  ++SQ 
Sbjct: 425  SSLGPCVWNTD-AGKRPFLVPGFENQGICTSLAYGPLSDDIVASYHPKSKKSNATVNSQC 483

Query: 553  PLTPSPTVGGRGIQGSHVLIKRLVGNCYQNVACTSANVNDVRFLKSAVVNMENCNPLFAC 374
                S    G     S +L+KR+  + Y+N+  TSA +++ +  ++A++NM+NC PLFA 
Sbjct: 484  IDPDSSPFPGSATLCSQLLVKRIADSHYRNLGSTSAYLSNGQMARTAIINMQNCFPLFAY 543

Query: 373  GDESTQGLSVYELPSLGILQNLKPHHNPILDVKFAPTPGSGILGCISKDRLQVFSAKV 200
            GDE+T+GL + ELPS  + QNLKPHH+PILDVK+A    +GILG +S+D+LQ+FSA++
Sbjct: 544  GDEATRGLRLKELPSFNVTQNLKPHHHPILDVKYAHNQDTGILGSVSEDKLQLFSAEL 601


>ref|XP_002519475.1| protein binding protein, putative [Ricinus communis]
            gi|223541338|gb|EEF42889.1| protein binding protein,
            putative [Ricinus communis]
          Length = 606

 Score =  458 bits (1179), Expect = e-126
 Identities = 251/573 (43%), Positives = 357/573 (62%), Gaps = 3/573 (0%)
 Frame = -3

Query: 1906 DDDEQVQLQQTTFTVAGQDDVGITTREEASSSSSLEKTIGSQSSEVDTACCAICMDSWSS 1727
            +D+E+ + +     V  + D    +  EA+  SS         +E++   C ICMD+W+S
Sbjct: 68   EDEEEEKERNKRRRVERERDNSYNSNGEAAGQSSQ-----GNRNEIEGLFCPICMDAWTS 122

Query: 1726 QGKHQVCCLPCGHVYGFSCIEKWIRQCNKKYAAKCPQCSKNCGVKDIIKLYVSQIAVVDG 1547
            +G H +CCLPCGH++G SCI KW++Q   K  AKCPQC++ C +KD+ KL+  ++AVVD 
Sbjct: 123  EGDHHICCLPCGHLFGLSCISKWLKQNRSK--AKCPQCNRKCTLKDVRKLFAPRLAVVDE 180

Query: 1546 EEQKKFLSLQAENEFLKMKIAALHEKICQDEEEKMCEAASLLENVTSGEMRLGTSEMNVT 1367
            E QK FL  Q+   ++       +   C+ E E     A L   +     R  T+ +   
Sbjct: 181  ESQKVFLFSQSSGFYM-------YFNWCKMESEWQKREADLQHKINQLTQR--TNYLEHL 231

Query: 1366 SGQMRLGTSEILTCVGDPQRQRLSEHTLGSRYGAQGSNCCRFALEDELV--LEGAKIMDI 1193
             G +   ++ ++T     Q   +  + L             F  ED     L+GA++ D+
Sbjct: 232  LGDVESRSTVLVTGSRSYQEHFIPGNLL-------------FQAEDLFFNFLDGARLFDM 278

Query: 1192 DASNQILILARCLPGMGGNHVLTKISLMYPYDSENIQLPVTTKNVKDLHVSPYGSKHALF 1013
            DA  QIL+LAR  P +G +HVLTK++L+ P+++E+I LP   K +KDLH+SP+   HAL 
Sbjct: 279  DALGQILLLARRFPKIG-SHVLTKMNLLPPHETEDILLPSNMKIIKDLHISPFNRSHALC 337

Query: 1012 ASLGKKLSVLSMESNNIVVTYDLPGPAWSCSWDLNSPHYLYAGLQNGMLLVFDMRHATNP 833
            ASLGK LSVLSMESN ++++ +LP PAWSCSWDLNS HY+YAGLQNG LL FD+R     
Sbjct: 338  ASLGKNLSVLSMESNCVILSCNLPAPAWSCSWDLNSSHYIYAGLQNGSLLAFDIRQTGRE 397

Query: 832  LESLTGLKPQPLHTIHSILHKSPSPSDVRTLLTASAIGPCVWNTGAAGERPFLIPELENQ 653
            +ES  GL   P+HT+HS+  +  S S  R LL+AS++G C WN     ERPFLIPE  NQ
Sbjct: 398  VESRLGLTNNPIHTLHSL--QDNSSSGARRLLSASSVGICQWNFDNTEERPFLIPETANQ 455

Query: 652  GVCVSVACCPSSDDIVASFRP-VQTSNDIISSQSPLTPSPTVGGRGIQGSHVLIKRLVGN 476
            GVC+SVA CPS+DDIVA++RP V+ SN++  SQ PLTPSP + G+G+ GSH+ +KR   +
Sbjct: 456  GVCISVAYCPSTDDIVATYRPRVEISNEMAVSQPPLTPSPVI-GQGVLGSHLHLKR-TDD 513

Query: 475  CYQNVACTSANVNDVRFLKSAVVNMENCNPLFACGDESTQGLSVYELPSLGILQNLKPHH 296
             YQ +   SA ++++R  KS +V+MEN  PLFA GDE++ GL + ELPS    Q LK H 
Sbjct: 514  KYQELGTASATISNIRLPKSVIVDMENRKPLFAAGDEASCGLILQELPSFSYAQRLKSHK 573

Query: 295  NPILDVKFAPTPGSGILGCISKDRLQVFSAKVS 197
            + I DVK+  T   G++GC+S+D LQ+FS+K++
Sbjct: 574  HLICDVKYKRTLSLGLVGCLSEDTLQLFSSKLT 606


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