BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010575
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520562.1| ubiquitin specific protease 39 and snrnp ass...    88   7e-30
gb|AFW69151.1| putative ubiquitin carboxyl-terminal hydrolase su...    86   1e-29
ref|NP_001152034.1| LOC100285671 [Zea mays] gi|195652005|gb|ACG4...    86   1e-29
gb|AFW69152.1| putative ubiquitin carboxyl-terminal hydrolase su...    86   1e-29
ref|XP_002437474.1| hypothetical protein SORBIDRAFT_10g027800 [S...    86   1e-29

>ref|XP_002520562.1| ubiquitin specific protease 39 and snrnp assembly factor, putative
           [Ricinus communis] gi|223540222|gb|EEF41795.1| ubiquitin
           specific protease 39 and snrnp assembly factor, putative
           [Ricinus communis]
          Length = 557

 Score = 88.2 bits (217), Expect(2) = 7e-30
 Identities = 41/66 (62%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
 Frame = +1

Query: 34  QVLNFEFESKCSGSIQNLDVYACLVCGKYFQGKHRDTPAYKHC--QYHHVFINLQTEKIY 207
           QVL+F+FE  CS S+ NL+VYACLVCGKY+QG+ R + AY H     HHV+INLQTEK+Y
Sbjct: 112 QVLDFDFERFCSVSLSNLNVYACLVCGKYYQGRGRKSHAYTHSLEAGHHVYINLQTEKVY 171

Query: 208 CFP*DY 225
           C P  Y
Sbjct: 172 CLPDGY 177



 Score = 67.4 bits (163), Expect(2) = 7e-30
 Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 7/51 (13%)
 Frame = +2

Query: 215 HEITDPSLDDIRHVLNPRFSQEQVLQLDENKQWSRAL-------GWIGLSS 346
           +EI DPSLDDIRHVLNPRFS++QV QLD N+QWSRAL       G +GL++
Sbjct: 177 YEIIDPSLDDIRHVLNPRFSRDQVEQLDRNRQWSRALDGSDYLPGMVGLNN 227


>gb|AFW69151.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
           [Zea mays]
          Length = 552

 Score = 86.3 bits (212), Expect(2) = 1e-29
 Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
 Frame = +1

Query: 34  QVLNFEFESKCSGSIQNLDVYACLVCGKYFQGKHRDTPAYKHC--QYHHVFINLQTEKIY 207
           QVL+F+FE  CS S+ NL+VYACLVCGKYFQG+   + AY H     HHVFINLQTEK Y
Sbjct: 106 QVLDFDFEKFCSISLSNLNVYACLVCGKYFQGRGLKSHAYTHSLEAGHHVFINLQTEKAY 165

Query: 208 CFP*DY 225
           C P  Y
Sbjct: 166 CLPDGY 171



 Score = 68.6 bits (166), Expect(2) = 1e-29
 Identities = 33/51 (64%), Positives = 41/51 (80%), Gaps = 7/51 (13%)
 Frame = +2

Query: 215 HEITDPSLDDIRHVLNPRFSQEQVLQLDENKQWSRAL-------GWIGLSS 346
           +EI DPSL+DIRHVLNPRF++EQVL LD+NKQWSRAL       G +GL++
Sbjct: 171 YEINDPSLEDIRHVLNPRFTKEQVLNLDKNKQWSRALDGSNYLPGMVGLNN 221


>ref|NP_001152034.1| LOC100285671 [Zea mays] gi|195652005|gb|ACG45470.1| USP39 protein
           [Zea mays]
          Length = 552

 Score = 86.3 bits (212), Expect(2) = 1e-29
 Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
 Frame = +1

Query: 34  QVLNFEFESKCSGSIQNLDVYACLVCGKYFQGKHRDTPAYKHC--QYHHVFINLQTEKIY 207
           QVL+F+FE  CS S+ NL+VYACLVCGKYFQG+   + AY H     HHVFINLQTEK Y
Sbjct: 106 QVLDFDFEKFCSISLSNLNVYACLVCGKYFQGRGLKSHAYTHSLEAGHHVFINLQTEKAY 165

Query: 208 CFP*DY 225
           C P  Y
Sbjct: 166 CLPDGY 171



 Score = 68.6 bits (166), Expect(2) = 1e-29
 Identities = 33/51 (64%), Positives = 41/51 (80%), Gaps = 7/51 (13%)
 Frame = +2

Query: 215 HEITDPSLDDIRHVLNPRFSQEQVLQLDENKQWSRAL-------GWIGLSS 346
           +EI DPSL+DIRHVLNPRF++EQVL LD+NKQWSRAL       G +GL++
Sbjct: 171 YEINDPSLEDIRHVLNPRFTKEQVLNLDKNKQWSRALDGSNYLPGMVGLNN 221


>gb|AFW69152.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
           [Zea mays]
          Length = 551

 Score = 86.3 bits (212), Expect(2) = 1e-29
 Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
 Frame = +1

Query: 34  QVLNFEFESKCSGSIQNLDVYACLVCGKYFQGKHRDTPAYKHC--QYHHVFINLQTEKIY 207
           QVL+F+FE  CS S+ NL+VYACLVCGKYFQG+   + AY H     HHVFINLQTEK Y
Sbjct: 106 QVLDFDFEKFCSISLSNLNVYACLVCGKYFQGRGLKSHAYTHSLEAGHHVFINLQTEKAY 165

Query: 208 CFP*DY 225
           C P  Y
Sbjct: 166 CLPDGY 171



 Score = 68.6 bits (166), Expect(2) = 1e-29
 Identities = 33/51 (64%), Positives = 41/51 (80%), Gaps = 7/51 (13%)
 Frame = +2

Query: 215 HEITDPSLDDIRHVLNPRFSQEQVLQLDENKQWSRAL-------GWIGLSS 346
           +EI DPSL+DIRHVLNPRF++EQVL LD+NKQWSRAL       G +GL++
Sbjct: 171 YEINDPSLEDIRHVLNPRFTKEQVLNLDKNKQWSRALDGSNYLPGMVGLNN 221


>ref|XP_002437474.1| hypothetical protein SORBIDRAFT_10g027800 [Sorghum bicolor]
           gi|241915697|gb|EER88841.1| hypothetical protein
           SORBIDRAFT_10g027800 [Sorghum bicolor]
          Length = 549

 Score = 86.3 bits (212), Expect(2) = 1e-29
 Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
 Frame = +1

Query: 34  QVLNFEFESKCSGSIQNLDVYACLVCGKYFQGKHRDTPAYKHC--QYHHVFINLQTEKIY 207
           QVL+F+FE  CS S+ NL+VYACLVCGKYFQG+   + AY H     HHVFINLQTEK Y
Sbjct: 104 QVLDFDFEKFCSISLSNLNVYACLVCGKYFQGRGLKSHAYTHSLEAGHHVFINLQTEKAY 163

Query: 208 CFP*DY 225
           C P  Y
Sbjct: 164 CLPDGY 169



 Score = 68.6 bits (166), Expect(2) = 1e-29
 Identities = 33/51 (64%), Positives = 41/51 (80%), Gaps = 7/51 (13%)
 Frame = +2

Query: 215 HEITDPSLDDIRHVLNPRFSQEQVLQLDENKQWSRAL-------GWIGLSS 346
           +EI DPSL+DIRHVLNPRF++EQVL LD+NKQWSRAL       G +GL++
Sbjct: 169 YEINDPSLEDIRHVLNPRFTKEQVLNLDKNKQWSRALDGSNYLPGMVGLNN 219