BLASTX nr result

ID: Coptis21_contig00010556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010556
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27986.3| unnamed protein product [Vitis vinifera]              379   e-103
ref|XP_002280299.1| PREDICTED: arginyl-tRNA synthetase-like [Vit...   379   e-103
ref|XP_002514206.1| arginyl-tRNA synthetase, putative [Ricinus c...   379   e-103
ref|XP_004135677.1| PREDICTED: arginine--tRNA ligase, cytoplasmi...   375   e-102
ref|XP_002301499.1| predicted protein [Populus trichocarpa] gi|2...   371   e-101

>emb|CBI27986.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score =  379 bits (974), Expect = e-103
 Identities = 185/238 (77%), Positives = 208/238 (87%)
 Frame = -1

Query: 715 DQFPNWEEVGEQAIGDLQVFYKKSKERFDNDPDFKERAQRAVVQLQGGEENYLRAWAQIC 536
           D+FPNWE    QAIGDLQ FYK SK+RFD DP FK RAQ+AVV+LQGGE +Y RAWAQIC
Sbjct: 292 DKFPNWEHASAQAIGDLQEFYKASKKRFDEDPAFKGRAQQAVVRLQGGETSYRRAWAQIC 351

Query: 535 EISRREFNMVYQRLGVELEEKGESFYNPYIPGVLEGLSEKGLVEESEGAQVIFFKGKKVP 356
           EISR EFN VYQRLGV+LEEKGESFYNPYIPGV+E LS +GLVEES+GA+VI  +G  +P
Sbjct: 352 EISRNEFNKVYQRLGVQLEEKGESFYNPYIPGVIEQLSNQGLVEESQGARVIHIEGVNIP 411

Query: 355 LIVVKSDGGYNYASTDLAALWYRLNDEKAEWIIYLTDVGQQGHFEMVFSAARRAGWLPRD 176
           LIVVKSDGGYNYASTD+AALWYRLN+EKAEWIIY+TDVGQQ HFEMVFSAA+ AGWLP +
Sbjct: 412 LIVVKSDGGYNYASTDMAALWYRLNEEKAEWIIYVTDVGQQQHFEMVFSAAKLAGWLPAN 471

Query: 175 EKLHSYPKTSHVGFGLVLGDDGKRFRTRASEVVRLVDLLDEAKNRSKAALVGRGKAEE 2
           + +  YPK SHVGFGLVLG+DGKRFRTR +EVVRLVDLLDEAKNRSK+ L+ RGKA E
Sbjct: 472 DNM--YPKASHVGFGLVLGEDGKRFRTRNTEVVRLVDLLDEAKNRSKSVLIERGKAAE 527


>ref|XP_002280299.1| PREDICTED: arginyl-tRNA synthetase-like [Vitis vinifera]
          Length = 649

 Score =  379 bits (974), Expect = e-103
 Identities = 185/238 (77%), Positives = 208/238 (87%)
 Frame = -1

Query: 715 DQFPNWEEVGEQAIGDLQVFYKKSKERFDNDPDFKERAQRAVVQLQGGEENYLRAWAQIC 536
           D+FPNWE    QAIGDLQ FYK SK+RFD DP FK RAQ+AVV+LQGGE +Y RAWAQIC
Sbjct: 250 DKFPNWEHASAQAIGDLQEFYKASKKRFDEDPAFKGRAQQAVVRLQGGETSYRRAWAQIC 309

Query: 535 EISRREFNMVYQRLGVELEEKGESFYNPYIPGVLEGLSEKGLVEESEGAQVIFFKGKKVP 356
           EISR EFN VYQRLGV+LEEKGESFYNPYIPGV+E LS +GLVEES+GA+VI  +G  +P
Sbjct: 310 EISRNEFNKVYQRLGVQLEEKGESFYNPYIPGVIEQLSNQGLVEESQGARVIHIEGVNIP 369

Query: 355 LIVVKSDGGYNYASTDLAALWYRLNDEKAEWIIYLTDVGQQGHFEMVFSAARRAGWLPRD 176
           LIVVKSDGGYNYASTD+AALWYRLN+EKAEWIIY+TDVGQQ HFEMVFSAA+ AGWLP +
Sbjct: 370 LIVVKSDGGYNYASTDMAALWYRLNEEKAEWIIYVTDVGQQQHFEMVFSAAKLAGWLPAN 429

Query: 175 EKLHSYPKTSHVGFGLVLGDDGKRFRTRASEVVRLVDLLDEAKNRSKAALVGRGKAEE 2
           + +  YPK SHVGFGLVLG+DGKRFRTR +EVVRLVDLLDEAKNRSK+ L+ RGKA E
Sbjct: 430 DNM--YPKASHVGFGLVLGEDGKRFRTRNTEVVRLVDLLDEAKNRSKSVLIERGKAAE 485


>ref|XP_002514206.1| arginyl-tRNA synthetase, putative [Ricinus communis]
           gi|223546662|gb|EEF48160.1| arginyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 592

 Score =  379 bits (973), Expect = e-103
 Identities = 182/238 (76%), Positives = 212/238 (89%)
 Frame = -1

Query: 715 DQFPNWEEVGEQAIGDLQVFYKKSKERFDNDPDFKERAQRAVVQLQGGEENYLRAWAQIC 536
           ++FPN+E+V E+AIGDLQ FYK SK+RFD D +FKERAQ+AVV+LQGGE  Y +AWAQIC
Sbjct: 193 EKFPNFEDVNERAIGDLQAFYKASKQRFDADSEFKERAQKAVVRLQGGEPKYRQAWAQIC 252

Query: 535 EISRREFNMVYQRLGVELEEKGESFYNPYIPGVLEGLSEKGLVEESEGAQVIFFKGKKVP 356
           +ISR+EF+ VYQRLGV+LEEKGESFYNPYIPG+++ LS +GLVEESEGA+VIF +G  +P
Sbjct: 253 DISRKEFDKVYQRLGVQLEEKGESFYNPYIPGIIDALSNQGLVEESEGARVIFIEGVNIP 312

Query: 355 LIVVKSDGGYNYASTDLAALWYRLNDEKAEWIIYLTDVGQQGHFEMVFSAARRAGWLPRD 176
           LIVVKSDGG+NYASTDL ALWYRLN+EKAEWIIY+TDVGQQ HF+MVF AA+RA WLP D
Sbjct: 313 LIVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTDVGQQQHFDMVFKAAKRASWLPAD 372

Query: 175 EKLHSYPKTSHVGFGLVLGDDGKRFRTRASEVVRLVDLLDEAKNRSKAALVGRGKAEE 2
           + +  +PK SHVGFGLVLGDDGKRFRTRA+EVVRLVDLLDEAK RSKA LV RGKAEE
Sbjct: 373 DSM--FPKASHVGFGLVLGDDGKRFRTRATEVVRLVDLLDEAKTRSKAVLVERGKAEE 428


>ref|XP_004135677.1| PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Cucumis
           sativus] gi|449489808|ref|XP_004158422.1| PREDICTED:
           arginine--tRNA ligase, cytoplasmic-like [Cucumis
           sativus]
          Length = 590

 Score =  375 bits (963), Expect = e-102
 Identities = 181/238 (76%), Positives = 210/238 (88%)
 Frame = -1

Query: 715 DQFPNWEEVGEQAIGDLQVFYKKSKERFDNDPDFKERAQRAVVQLQGGEENYLRAWAQIC 536
           ++FPNWEEV E AIGDLQ FYK SK+RFD+DP FKE+AQ+AVV LQGGE  Y +AWAQIC
Sbjct: 190 EKFPNWEEVTETAIGDLQTFYKASKQRFDSDPAFKEKAQQAVVLLQGGEPKYRKAWAQIC 249

Query: 535 EISRREFNMVYQRLGVELEEKGESFYNPYIPGVLEGLSEKGLVEESEGAQVIFFKGKKVP 356
           EISR EFN VY+RLGV+LEEKGESFYNPYIP V++ L++KGLVEES+GA+VIF  G  +P
Sbjct: 250 EISRNEFNRVYERLGVQLEEKGESFYNPYIPNVIKELTDKGLVEESQGARVIFIDGINIP 309

Query: 355 LIVVKSDGGYNYASTDLAALWYRLNDEKAEWIIYLTDVGQQGHFEMVFSAARRAGWLPRD 176
           LIVVKSDGG+NYASTDLAA+WYRLN+EKAEWIIY+TDVGQQ HF+MVF A +RAGWLP +
Sbjct: 310 LIVVKSDGGFNYASTDLAAIWYRLNEEKAEWIIYVTDVGQQQHFDMVFRAGKRAGWLPLE 369

Query: 175 EKLHSYPKTSHVGFGLVLGDDGKRFRTRASEVVRLVDLLDEAKNRSKAALVGRGKAEE 2
           +  + YPKT+HVGFGLVLG+DGKRFRTR +EVVRLVDLLDEAKNRSKAAL+ R KA E
Sbjct: 370 D--NKYPKTTHVGFGLVLGEDGKRFRTRNTEVVRLVDLLDEAKNRSKAALIEREKAAE 425


>ref|XP_002301499.1| predicted protein [Populus trichocarpa] gi|222843225|gb|EEE80772.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score =  371 bits (953), Expect = e-101
 Identities = 178/238 (74%), Positives = 209/238 (87%)
 Frame = -1

Query: 715 DQFPNWEEVGEQAIGDLQVFYKKSKERFDNDPDFKERAQRAVVQLQGGEENYLRAWAQIC 536
           ++FPN+E+V E AIGDLQ FYK+SK+RFD D +FK+RAQ+AVV+LQ GE+ Y +AWAQIC
Sbjct: 191 EKFPNFEDVNETAIGDLQAFYKESKQRFDVDAEFKDRAQKAVVRLQSGEQMYRKAWAQIC 250

Query: 535 EISRREFNMVYQRLGVELEEKGESFYNPYIPGVLEGLSEKGLVEESEGAQVIFFKGKKVP 356
           EISRREF+ VYQRLGV LEEKGESFYNPYIPGV+E L+ +GLVEES+GA+VIF +G  +P
Sbjct: 251 EISRREFDQVYQRLGVHLEEKGESFYNPYIPGVIEALTNQGLVEESKGARVIFIEGINIP 310

Query: 355 LIVVKSDGGYNYASTDLAALWYRLNDEKAEWIIYLTDVGQQGHFEMVFSAARRAGWLPRD 176
           LIVVKSDGGYNYASTD+ ALWYRL +EKAEWIIY+TDVGQQ HF+M F AA+RAGWLP D
Sbjct: 311 LIVVKSDGGYNYASTDMTALWYRLTEEKAEWIIYVTDVGQQQHFDMFFKAAKRAGWLPAD 370

Query: 175 EKLHSYPKTSHVGFGLVLGDDGKRFRTRASEVVRLVDLLDEAKNRSKAALVGRGKAEE 2
           ++   YPK SHVGFGLVLG+DGKRFRTR++EVVRL DLLDEAK RSKAAL+ RGKA E
Sbjct: 371 DR--QYPKASHVGFGLVLGEDGKRFRTRSTEVVRLADLLDEAKTRSKAALIERGKAAE 426


Top