BLASTX nr result

ID: Coptis21_contig00010550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010550
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273621.1| PREDICTED: putative disease resistance prote...    69   4e-10
ref|XP_002516740.1| leucine-rich repeat containing protein, puta...    63   2e-08
ref|XP_003634795.1| PREDICTED: putative disease resistance prote...    63   3e-08
ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002335004.1| cc-nbs-lrr resistance protein [Populus trich...    61   8e-08

>ref|XP_002273621.1| PREDICTED: putative disease resistance protein RGA1 [Vitis
           vinifera] gi|147842093|emb|CAN62651.1| hypothetical
           protein VITISV_003942 [Vitis vinifera]
          Length = 1129

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
 Frame = +3

Query: 72  LALVFSEESDE---ERQDAAAGEEDRKRIECVLDDLQPHANLAELYVRNYEGNKFPLWMM 242
           L L + E+ D     R + A   E+      V++ LQPH NL EL++ NYEG +FP WMM
Sbjct: 730 LRLYWLEQKDSLWGTRTETAEESEEGSEAVSVMESLQPHLNLKELFIANYEGLRFPNWMM 789

Query: 243 -SSINTYLPNLVKLELISCNQCSEL 314
              + + LPNLVK+E+ SCN+   L
Sbjct: 790 DDGLGSLLPNLVKIEISSCNRSQVL 814


>ref|XP_002516740.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223544113|gb|EEF45638.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1104

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/83 (40%), Positives = 49/83 (59%)
 Frame = +3

Query: 66  RSLALVFSEESDEERQDAAAGEEDRKRIECVLDDLQPHANLAELYVRNYEGNKFPLWMMS 245
           +SL+L +S E          GE+     E VLD  QPH+NL +L +R Y+G+KF  WM  
Sbjct: 716 KSLSLCWSRE----------GEDSSNLSEEVLDGCQPHSNLKKLSIRKYQGSKFASWM-- 763

Query: 246 SINTYLPNLVKLELISCNQCSEL 314
             +  LPNLV++EL+ C++C  L
Sbjct: 764 -TDLSLPNLVEIELVDCDRCEHL 785


>ref|XP_003634795.1| PREDICTED: putative disease resistance protein RGA1-like [Vitis
           vinifera]
          Length = 1274

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/55 (49%), Positives = 38/55 (69%)
 Frame = +3

Query: 150 ECVLDDLQPHANLAELYVRNYEGNKFPLWMMSSINTYLPNLVKLELISCNQCSEL 314
           E V+  LQPH NL ELY+  Y G +FP WMM+S+   LPNL+K+++  C++C  L
Sbjct: 740 ELVMKGLQPHRNLKELYIGGYRGERFPSWMMNSL---LPNLIKIKIAGCSRCQIL 791


>ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|222844654|gb|EEE82201.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/55 (50%), Positives = 41/55 (74%)
 Frame = +3

Query: 150 ECVLDDLQPHANLAELYVRNYEGNKFPLWMMSSINTYLPNLVKLELISCNQCSEL 314
           E VL+ LQPH+NL +L +  Y G++FP WMM ++N  LPNLV++EL +C+ C +L
Sbjct: 135 EEVLEGLQPHSNLKKLRICGYGGSRFPNWMM-NLNMTLPNLVEMELSACDHCEQL 188


>ref|XP_002335004.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832589|gb|EEE71066.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 851

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/55 (50%), Positives = 41/55 (74%)
 Frame = +3

Query: 150 ECVLDDLQPHANLAELYVRNYEGNKFPLWMMSSINTYLPNLVKLELISCNQCSEL 314
           E VL+ LQPH+NL +L +  Y G++FP WMM ++N  LPNLV++EL +C+ C +L
Sbjct: 684 EEVLEGLQPHSNLKKLKIWGYGGSRFPNWMM-NLNMTLPNLVEMELSACDHCEQL 737


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