BLASTX nr result

ID: Coptis21_contig00010547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010547
         (1440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256...   292   1e-76
ref|XP_002510979.1| DNA binding protein, putative [Ricinus commu...   285   2e-74
ref|XP_004144123.1| PREDICTED: uncharacterized protein LOC101209...   274   4e-71
emb|CBI27823.3| unnamed protein product [Vitis vinifera]              267   4e-69
emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]   259   1e-66

>ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
          Length = 289

 Score =  292 bits (748), Expect = 1e-76
 Identities = 157/294 (53%), Positives = 199/294 (67%), Gaps = 3/294 (1%)
 Frame = -3

Query: 1234 SSAATARKVRFAPKLKVRKTHKLVEPKSEVVATADAHQIQELLSRVNEGPRRGL-RLERK 1058
            S+AA  RKVRFAPK   R+  K V PKSEV    DA Q  EL+   NE   +G  + E+K
Sbjct: 9    STAAATRKVRFAPKAP-RRVPKSVVPKSEVAEDDDAAQANELMRHFNEASMKGKPKAEKK 67

Query: 1057 SETVQVAFGQAGESTSVRTFG--RGSSSSASNIEGPVSDDGRYLLHEKKKKDYAEPWDYY 884
                QVAFG  G S S+R++G  RG+++S S  + P S  G Y       K+Y EPWDYY
Sbjct: 68   LAPTQVAFGYGGASASIRSYGTPRGATNS-SRYQDPASGGGLYGSGLSDHKEYKEPWDYY 126

Query: 883  SYYPATLPIRRPHSGDPELLDDEEFGEASADLEYDESSISPAAELGLTEECGQERMLFLQ 704
            +YYP TLP+RRP+SG+PELLD+EEFGEAS    YDE+S +PA ELGL +E  +  MLFLQ
Sbjct: 127  TYYPVTLPLRRPYSGNPELLDEEEFGEASESTAYDENSTNPAMELGLMDENQEASMLFLQ 186

Query: 703  LPATLPLVRRSSSVNGKEVIDSSKPFRRGAQPQKDCGLGDMPAGFMGKMLVYKSGAVKLK 524
            LPAT+P+++++++   KE               K C L ++P+GFMGKMLVYKSGA+KLK
Sbjct: 187  LPATMPMIKQAATAEVKE--------------NKTCRLEELPSGFMGKMLVYKSGAIKLK 232

Query: 523  LGEIIYDVSPGSDCVFAQNVAAINLKEKHCCDLGELDKRAVITPNVDSLLKGCD 362
            LG+ +YDVSPG DCVFAQ+V AIN ++K CC LGEL KRAV+TP+VDS L   D
Sbjct: 233  LGDTLYDVSPGLDCVFAQDVVAINTEDKCCCVLGELKKRAVVTPDVDSALSSMD 286


>ref|XP_002510979.1| DNA binding protein, putative [Ricinus communis]
            gi|223550094|gb|EEF51581.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 328

 Score =  285 bits (729), Expect = 2e-74
 Identities = 163/323 (50%), Positives = 213/323 (65%), Gaps = 31/323 (9%)
 Frame = -3

Query: 1249 MDEAASSAATARKVRFAPKLKVRKTHKLVEPKSEVVATA----DAHQIQELLSRVNEGPR 1082
            MD+   S +  RKV+F PK   ++  +   PK+EV        +A Q Q+L+ + NE  R
Sbjct: 1    MDDEQPSPSQ-RKVKFTPKAPSQRRPRRTVPKTEVNGVDNNEDEAVQAQKLMRKFNENFR 59

Query: 1081 R-GLRLERKSETVQVAFGQ-AGESTSVRTFG--RGSSSSASNIEGPVSDDGRYLLHE--- 923
            R G R+E+KS TVQVAFG  A  STS+RTFG  +G +  +S I+    DDG+ ++     
Sbjct: 60   RQGPRVEKKS-TVQVAFGPGATSSTSIRTFGVSKGENPVSSGIKDSTDDDGKIVISSLST 118

Query: 922  -------------------KKKKDYAEPWDY-YSYYPATLPIRRPHSGDPELLDDEEFGE 803
                               K KKDY EPWDY  +YYP TLP+RRP+SGDP LLD+ EFGE
Sbjct: 119  DKEDEIINCASEDIDALPLKIKKDYREPWDYDRTYYPTTLPLRRPYSGDPVLLDEAEFGE 178

Query: 802  ASADLEYDESSISPAAELGLTEECGQERMLFLQLPATLPLVRRSSSVNGKEVIDSSKPFR 623
            A+  LEYDES+++PA++L L EEC  E+M+F QLPA LPLV+RS+S  GKE  + S P +
Sbjct: 179  AARKLEYDESTMNPASDLELLEECDTEKMIFFQLPAKLPLVKRSASAKGKEKAEGSIPSQ 238

Query: 622  RGAQPQKDCGLGDMPAGFMGKMLVYKSGAVKLKLGEIIYDVSPGSDCVFAQNVAAINLKE 443
                 +K+  L  + AG+MGKMLVY+SGAVKLKLG+ +YDVS GSDC+FAQ+V AIN   
Sbjct: 239  GKNAAKKESSLDGLSAGYMGKMLVYRSGAVKLKLGDTLYDVSQGSDCMFAQDVMAINTAA 298

Query: 442  KHCCDLGELDKRAVITPNVDSLL 374
            KHCC +GEL+KRAV+TP+VDSLL
Sbjct: 299  KHCCTIGELEKRAVVTPDVDSLL 321


>ref|XP_004144123.1| PREDICTED: uncharacterized protein LOC101209454 [Cucumis sativus]
            gi|449500539|ref|XP_004161125.1| PREDICTED:
            uncharacterized LOC101209454 [Cucumis sativus]
          Length = 293

 Score =  274 bits (701), Expect = 4e-71
 Identities = 147/292 (50%), Positives = 201/292 (68%), Gaps = 1/292 (0%)
 Frame = -3

Query: 1234 SSAATARKVRFAPKLKVRKTHKLVEPKSEVVATADAHQIQELLSRVNEGPRRGL-RLERK 1058
            +  A  RK++FAPK  VR+  K  E K+EV   ADA Q ++LL R NE  +R   R+ RK
Sbjct: 8    NKTAAPRKLKFAPKAPVRRIPK-PEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRK 66

Query: 1057 SETVQVAFGQAGESTSVRTFGRGSSSSASNIEGPVSDDGRYLLHEKKKKDYAEPWDYYSY 878
            +   QVAFG  G S+++R++G    S A N   P ++DG   L     K+Y EPWDYYSY
Sbjct: 67   AAPTQVAFGSGGSSSTLRSYG---VSKAGN--RPRNEDGT--LPASTSKEYVEPWDYYSY 119

Query: 877  YPATLPIRRPHSGDPELLDDEEFGEASADLEYDESSISPAAELGLTEECGQERMLFLQLP 698
            YP TLP+RRP+SG+P+ L++EEFGEAS +L YDE++ + A  LGL EE  +  +LFLQLP
Sbjct: 120  YPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLP 179

Query: 697  ATLPLVRRSSSVNGKEVIDSSKPFRRGAQPQKDCGLGDMPAGFMGKMLVYKSGAVKLKLG 518
              +P++++SSSV      +SS+  +     QK C + ++P+G +GK+LVY+SGAVKLKLG
Sbjct: 180  PMVPMIKQSSSVEDMGSGNSSEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLG 239

Query: 517  EIIYDVSPGSDCVFAQNVAAINLKEKHCCDLGELDKRAVITPNVDSLLKGCD 362
            +IIYDVS G DC FAQ VAAIN++ K CC +GEL KRA++TP+VDS+LK  +
Sbjct: 240  DIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIE 291


>emb|CBI27823.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  267 bits (683), Expect = 4e-69
 Identities = 152/304 (50%), Positives = 193/304 (63%), Gaps = 13/304 (4%)
 Frame = -3

Query: 1234 SSAATARKVRFAPKLKVRKTHKLVEPKSEVVATADAHQIQELLSRVNEGP--RRGLRL-- 1067
            S+AA  RKVRFAPK   R+  K V PKSEV    DA Q  EL+   N     RR +    
Sbjct: 9    STAAATRKVRFAPKAP-RRVPKSVVPKSEVAEDDDAAQANELMRHFNVFILWRRIIFYFF 67

Query: 1066 -------ERKSETVQVAFGQAGESTSVRTFG--RGSSSSASNIEGPVSDDGRYLLHEKKK 914
                          QVAFG  G S S+R++G  RG+++S S  + P S  G Y       
Sbjct: 68   IFFLFCSHNCMAPTQVAFGYGGASASIRSYGTPRGATNS-SRYQDPASGGGLYGSGLSDH 126

Query: 913  KDYAEPWDYYSYYPATLPIRRPHSGDPELLDDEEFGEASADLEYDESSISPAAELGLTEE 734
            K+Y EPWDYY+YYP TLP+RRP+SG+PELLD+EEFGEAS    YDE+S +PA ELGL +E
Sbjct: 127  KEYKEPWDYYTYYPVTLPLRRPYSGNPELLDEEEFGEASESTAYDENSTNPAMELGLMDE 186

Query: 733  CGQERMLFLQLPATLPLVRRSSSVNGKEVIDSSKPFRRGAQPQKDCGLGDMPAGFMGKML 554
              +  MLFLQLPAT+P+++++++                    + C L ++P+GFMGKML
Sbjct: 187  NQEASMLFLQLPATMPMIKQAATA-------------------ETCRLEELPSGFMGKML 227

Query: 553  VYKSGAVKLKLGEIIYDVSPGSDCVFAQNVAAINLKEKHCCDLGELDKRAVITPNVDSLL 374
            VYKSGA+KLKLG+ +YDVSPG DCVFAQ+V AIN ++K CC LGEL KRAV+TP+VDS L
Sbjct: 228  VYKSGAIKLKLGDTLYDVSPGLDCVFAQDVVAINTEDKCCCVLGELKKRAVVTPDVDSAL 287

Query: 373  KGCD 362
               D
Sbjct: 288  SSMD 291


>emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]
          Length = 348

 Score =  259 bits (662), Expect = 1e-66
 Identities = 159/346 (45%), Positives = 199/346 (57%), Gaps = 54/346 (15%)
 Frame = -3

Query: 1249 MDEAASSAATARKVRFAPKLKVRKTHKLVEPKSEVVATAD-AHQIQELLSRVNEGPRRGL 1073
            MD   SS+ + RKVRFAPK   R+  K   P+  V    D A + Q LL RVNE  RR  
Sbjct: 1    MDHNESSSVSPRKVRFAPKSPPRRKPKTTAPQPVVAEEEDEAKRAQYLLRRVNEKLRRQG 60

Query: 1072 RLERKSETVQVAFGQ--AGESTSVRTFG---RGSSSSASNIEGPVS-------------- 950
                K+ +VQV FG   A  S ++RTFG    G+S  +S +E  VS              
Sbjct: 61   PKVEKTSSVQVVFGPGAATPSDTIRTFGVHRDGNSDKSSGMELKVSTPDHEEIAVSSXST 120

Query: 949  --------------DDGRYLLHEKKKKDYAEPWDY-YSYYPATLPIRRPHSGDPELLDDE 815
                          DD   +     +K Y EPWDY +SYYP TLP+R+PHSGDPE+LD+ 
Sbjct: 121  TKPDETNGXFADATDDSAQI-----RKRYKEPWDYVHSYYPTTLPLRKPHSGDPEILDEA 175

Query: 814  EFGEASADLEYDESSISPAAELGLTEECGQERMLFLQLPATLPLVRRSSSVNGKEVIDSS 635
            EFGEAS +LEYDE +I+PA+ELGL EE  + RM   QLPA LPLV++S+S  GKE++ +S
Sbjct: 176  EFGEASTNLEYDEKTINPASELGLLEESEKGRMFLFQLPANLPLVKQSASAKGKEIVGNS 235

Query: 634  KPFR------RGAQ-------------PQKDCGLGDMPAGFMGKMLVYKSGAVKLKLGEI 512
                      +G Q              +  C L D+  G  GKMLVYKSGA+KLKLGEI
Sbjct: 236  TSLEGIYASAKGKQVARSSLSSKSIGTSEHSCRLEDLAGGHXGKMLVYKSGAIKLKLGEI 295

Query: 511  IYDVSPGSDCVFAQNVAAINLKEKHCCDLGELDKRAVITPNVDSLL 374
            +YDVSPG DC   Q+V AIN  +KHC  LGEL KR ++TP+VDSLL
Sbjct: 296  LYDVSPGLDCTCVQDVVAINTVDKHCYALGELGKRVIVTPDVDSLL 341


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