BLASTX nr result

ID: Coptis21_contig00010539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010539
         (1575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285816.1| PREDICTED: F-box/kelch-repeat protein At1g22...   661   0.0  
gb|AFY26883.1| F-box family protein [Morella rubra]                   631   e-178
ref|XP_002271882.1| PREDICTED: F-box/kelch-repeat protein At1g22...   612   e-173
ref|XP_003531046.1| PREDICTED: F-box/kelch-repeat protein At1g22...   604   e-170
emb|CAN63480.1| hypothetical protein VITISV_011508 [Vitis vinifera]   601   e-169

>ref|XP_002285816.1| PREDICTED: F-box/kelch-repeat protein At1g22040 [Vitis vinifera]
          Length = 477

 Score =  661 bits (1706), Expect = 0.0
 Identities = 329/478 (68%), Positives = 380/478 (79%), Gaps = 20/478 (4%)
 Frame = +1

Query: 97   MGGILSKTG----TGEYNEILLQSASCKRQRMSCIPDEDNPRLIPNLPDEISIQILARLP 264
            MG  LS  G    T E++E   Q  +CKRQRMS   +E+NPRLIP+LPDEISI ILARLP
Sbjct: 1    MGSFLSLAGPKSRTSEHDEGS-QHETCKRQRMSSSFNEENPRLIPSLPDEISILILARLP 59

Query: 265  RIYYLNVKLVSRSWKNAVTGTELFDLRKELGITEEWLYILTKVEEDKLLWHAFDPLSKKW 444
            RI Y +++LVSR+WK  +T  ELF+LRKELG TEEWLYILTKVEED+LLWHA DPLS++W
Sbjct: 60   RICYFDLRLVSRNWKATITSPELFNLRKELGKTEEWLYILTKVEEDRLLWHALDPLSRRW 119

Query: 445  QRLPPMPPVAKGEEPRKVLAGL------------ADVIRNWLGRRDPLDRLPYCGCAIGA 588
            QRLP MP V   EE RKV +GL            ADVIR WLGR+D LD++P+CGCAIGA
Sbjct: 120  QRLPSMPNVVYEEESRKVSSGLWMWNMVGPSIKIADVIRGWLGRKDTLDQMPFCGCAIGA 179

Query: 589  VDGCLYVLGGFSRASAVKCVWCFNPILNVWSEVESMSIGRAYCKTGVLKNKLYXXXXXXX 768
            VDGCLYVLGGFS AS ++CVW F+PILN WSEV  MS GRAYCKTG+L +KLY       
Sbjct: 180  VDGCLYVLGGFSSASTMRCVWRFDPILNAWSEVTPMSTGRAYCKTGILNDKLYVVGGVSR 239

Query: 769  XXXXLTPLQSAEVYDPCTGLWSEVPSMPFSKAQLLPTAFLADMLKPIATGMTTYRGRLCV 948
                LTPLQSAEV+DPCT  WS++PSMPFS+AQ+LPTAFLADMLKPIATGMT+Y GRLCV
Sbjct: 240  GRGGLTPLQSAEVFDPCTDTWSQIPSMPFSRAQVLPTAFLADMLKPIATGMTSYMGRLCV 299

Query: 949  PQSLYSWPFFVDVGGEVYDPESNTWLEMPSGMGDGWPARQAGTKLSVVVEEELYALDPSS 1128
            PQSLYSWPFFVDVGGE+YDPE+N+W+EMP GMGDGWPARQAGTKLSVVV+ ELYA DPSS
Sbjct: 300  PQSLYSWPFFVDVGGEIYDPETNSWVEMPIGMGDGWPARQAGTKLSVVVDGELYAFDPSS 359

Query: 1129 SLDSGKIKIYSHEDDAWKVVVGKVPINDFTDSESPYLLAGFLGRLHVITKDVNHDVVVLQ 1308
            SLDSG IK+Y  ++DAWKVV+GKVPI DFTDSESPYLLAGF G+LH+ITKD NHD+ VLQ
Sbjct: 360  SLDSGNIKVYDQKEDAWKVVIGKVPICDFTDSESPYLLAGFHGKLHIITKDANHDIAVLQ 419

Query: 1309 ADPHNR----SSSAPAPLIDSLGEQSDSLVESETDIWKVIATMNFGSAELVSCQVLDI 1470
            AD  +      S++P+    S  E SD L E+ET +WKVIAT +FG+AELVSCQVLDI
Sbjct: 420  ADLRDNLGFPPSTSPSCSAASSHEHSDLLAETETVVWKVIATRDFGTAELVSCQVLDI 477


>gb|AFY26883.1| F-box family protein [Morella rubra]
          Length = 473

 Score =  631 bits (1628), Expect = e-178
 Identities = 309/474 (65%), Positives = 370/474 (78%), Gaps = 16/474 (3%)
 Frame = +1

Query: 97   MGGILSKTG----TGEYNEILLQSASCKRQRMSCIPDEDNPRLIPNLPDEISIQILARLP 264
            MG  LS  G    TG+Y ++  Q+ +CKRQRMS    E++ RLIP+LPDE+S+QI+ARLP
Sbjct: 1    MGQFLSLGGQKCRTGDYTKVS-QNDTCKRQRMSSSFTEESARLIPSLPDELSMQIIARLP 59

Query: 265  RIYYLNVKLVSRSWKNAVTGTELFDLRKELGITEEWLYILTKVEEDKLLWHAFDPLSKKW 444
            RI+Y +V+LVSR W   V   ELF LR+EL  TEEWLY+LTKVEEDKL WHA DPLS+KW
Sbjct: 60   RIHYFDVRLVSRKWMATVMSPELFKLRRELRKTEEWLYLLTKVEEDKLSWHALDPLSRKW 119

Query: 445  QRLPPMPPVAKGEEPRKVLAGL------------ADVIRNWLGRRDPLDRLPYCGCAIGA 588
            QRLP +P V   +E RK  +GL            A+V+R WLGR+D LD++P+CGCAIGA
Sbjct: 120  QRLPMIPHVVYEDESRKGFSGLWMWNMAGPSVNIAEVVRRWLGRKDSLDQMPFCGCAIGA 179

Query: 589  VDGCLYVLGGFSRASAVKCVWCFNPILNVWSEVESMSIGRAYCKTGVLKNKLYXXXXXXX 768
            VDGCLYVLGGF RA  +KCVW F+PI N WSEV SMS GRAYCKTG+L NKLY       
Sbjct: 180  VDGCLYVLGGFCRALTMKCVWKFDPIKNDWSEVTSMSTGRAYCKTGILNNKLYVVGGVSQ 239

Query: 769  XXXXLTPLQSAEVYDPCTGLWSEVPSMPFSKAQLLPTAFLADMLKPIATGMTTYRGRLCV 948
                LTPLQSAEV+DP TG WS+VP+MPFSKAQ LPTAFLADMLKPIATG+T Y GRLCV
Sbjct: 240  GRGSLTPLQSAEVFDPSTGSWSQVPNMPFSKAQALPTAFLADMLKPIATGLTPYMGRLCV 299

Query: 949  PQSLYSWPFFVDVGGEVYDPESNTWLEMPSGMGDGWPARQAGTKLSVVVEEELYALDPSS 1128
            PQSLYSWPFFVDVGGE+YDPE+N+W+EMP+GMG+GWPARQAGTKLSVVV+ ELYA DPSS
Sbjct: 300  PQSLYSWPFFVDVGGEIYDPETNSWIEMPNGMGEGWPARQAGTKLSVVVDGELYAFDPSS 359

Query: 1129 SLDSGKIKIYSHEDDAWKVVVGKVPINDFTDSESPYLLAGFLGRLHVITKDVNHDVVVLQ 1308
            S+DSGKIK+Y  ++DAWKVV+GKVP++DF D+ESPYLLAGF G+LHVITKD +H + VLQ
Sbjct: 360  SMDSGKIKVYDRKEDAWKVVIGKVPMHDFADTESPYLLAGFHGKLHVITKDSSHHIAVLQ 419

Query: 1309 ADPHNRSSSAPAPLIDSLGEQSDSLVESETDIWKVIATMNFGSAELVSCQVLDI 1470
            AD  +  SS+ +    SL E S S+ ES+  +W+VI T +FG AE+VSCQVL+I
Sbjct: 420  ADSCSSPSSSSSLFAGSLNENSGSMAESDAVVWRVIGTRDFGPAEMVSCQVLEI 473


>ref|XP_002271882.1| PREDICTED: F-box/kelch-repeat protein At1g22040-like [Vitis vinifera]
          Length = 479

 Score =  612 bits (1578), Expect = e-173
 Identities = 303/471 (64%), Positives = 366/471 (77%), Gaps = 18/471 (3%)
 Frame = +1

Query: 112  SKTGTGEYNEILLQSASCKRQRMSCIPDEDNP--RLIPNLPDEISIQILARLPRIYYLNV 285
            SKT   E++E+ +   +CKRQR+S    E+N   RLIPNLPDEIS QILAR+PRI+YLNV
Sbjct: 10   SKTRFEEHSEVSVDE-TCKRQRLSSSISEENENVRLIPNLPDEISFQILARVPRIFYLNV 68

Query: 286  KLVSRSWKNAVTGTELFDLRKELGITEEWLYILTKVEEDKLLWHAFDPLSKKWQRLPPMP 465
            +LVSRSWK A+  TELF+LRKELG TEEWLYILTK+++DKLLW++ DPLS++WQRLPPMP
Sbjct: 69   RLVSRSWKGAIMSTELFNLRKELGTTEEWLYILTKIKDDKLLWYSLDPLSRRWQRLPPMP 128

Query: 466  PVAKGEEPRKVLAGL------------ADVIRNWLGRRDPLDRLPYCGCAIGAVDGCLYV 609
             VA  +  RK  +GL            ADVIR WLGRRD LDR+P+CG AIG VDGCLYV
Sbjct: 129  NVAHEDGYRKGFSGLRMLNMVGSSNKIADVIRGWLGRRDELDRIPFCGSAIGTVDGCLYV 188

Query: 610  LGGFSRASAVKCVWCFNPILNVWSEVESMSIGRAYCKTGVLKNKLYXXXXXXXXXXXLTP 789
            LGGFSRASA+  VW ++P+ N WSEV  MSIGRAYCKTGVL NKLY           L P
Sbjct: 189  LGGFSRASALTSVWRYDPVQNGWSEVSPMSIGRAYCKTGVLNNKLYVVGGVTRGRGGLIP 248

Query: 790  LQSAEVYDPCTGLWSEVPSMPFSKAQLLPTAFLADMLKPIATGMTTYRGRLCVPQSLYSW 969
            LQSAEV+DP TG+WS++PSMPF+KAQ+LPTAFLAD+LKPIATGMT+Y+G+L VPQSLY W
Sbjct: 249  LQSAEVFDPRTGVWSQIPSMPFAKAQVLPTAFLADLLKPIATGMTSYKGKLFVPQSLYYW 308

Query: 970  PFFVDVGGEVYDPESNTWLEMPSGMGDGWPARQAGTKLSVVVEEELYALDPSSSLDSGKI 1149
            PFFVDVGGEVYDPE+N+W EMP GMG+GWPARQAGTKL  +V++ELYALDPSSS D   I
Sbjct: 309  PFFVDVGGEVYDPETNSWFEMPVGMGEGWPARQAGTKLGAIVDDELYALDPSSSADIATI 368

Query: 1150 KIYSHEDDAWKVVVGKVPINDFTDSESPYLLAGFLGRLHVITKDVNHDVVVLQADPHNRS 1329
            K+Y ++ D+WKVV   VPI+DF ++ESPYLLA  LG+LHVITKD N++  VLQA+  N  
Sbjct: 369  KVYDYQCDSWKVVSTDVPIHDFAEAESPYLLASLLGKLHVITKDANNNFTVLQANMQNHL 428

Query: 1330 SSAP----APLIDSLGEQSDSLVESETDIWKVIATMNFGSAELVSCQVLDI 1470
             S P    +PL ++  EQ++S  ESETD+WKVIA  + G+ ELVSCQ+L I
Sbjct: 429  HSFPLTPLSPLGNNSSEQTESAAESETDVWKVIAARSAGACELVSCQILGI 479


>ref|XP_003531046.1| PREDICTED: F-box/kelch-repeat protein At1g22040-like [Glycine max]
          Length = 481

 Score =  604 bits (1557), Expect = e-170
 Identities = 301/482 (62%), Positives = 363/482 (75%), Gaps = 24/482 (4%)
 Frame = +1

Query: 97   MGGIL----SKTGTGEYNEILLQSASCKRQRMSCIPDEDNPRLIPNLPDEISIQILARLP 264
            MG IL    SKT   + + +L Q  SCKRQR+S    EDNPRLIP+LPDEISIQILAR+P
Sbjct: 1    MGNILNLNNSKTRRNDSHGVL-QGESCKRQRLSPNSCEDNPRLIPSLPDEISIQILARVP 59

Query: 265  RIYYLNVKLVSRSWKNAVTGTELFDLRKELGITEEWLYILTKVEEDKLLWHAFDPLSKKW 444
            RIYYLN+KLV R+WK     +ELF +RKELG  EEWLYILTKV +DKLLW+A DPLS++W
Sbjct: 60   RIYYLNLKLVCRAWKETFVSSELFCVRKELGSMEEWLYILTKVNDDKLLWYALDPLSRRW 119

Query: 445  QRLPPMPPVAKGEEPRKVLAG--------------LADVIRNWLGRRDPLDRLPYCGCAI 582
            Q+LPPMP V   +E +K L                + DVI +WLGRRD LD +P+CGC+I
Sbjct: 120  QKLPPMPKVGFEDETKKGLISFPLRMWSMMGSSIRIVDVIMSWLGRRDALDWMPFCGCSI 179

Query: 583  GAVDGCLYVLGGFSRASAVKCVWCFNPILNVWSEVESMSIGRAYCKTGVLKNKLYXXXXX 762
            GAVDGC+Y LGGFSRASA+K VW ++PI N W+E   MS+GRAYCKTG+L NKLY     
Sbjct: 180  GAVDGCIYALGGFSRASAMKYVWQYDPIKNSWAEASPMSVGRAYCKTGILNNKLYVVGGV 239

Query: 763  XXXXXXLTPLQSAEVYDPCTGLWSEVPSMPFSKAQLLPTAFLADMLKPIATGMTTYRGRL 942
                  L+PLQSAEVYDP TG+WS +PSMPF++AQ+LPTAFLAD+LKPIATGM +Y+GRL
Sbjct: 240  TRGRGGLSPLQSAEVYDPHTGMWSLLPSMPFARAQVLPTAFLADLLKPIATGMASYKGRL 299

Query: 943  CVPQSLYSWPFFVDVGGEVYDPESNTWLEMPSGMGDGWPARQAGTKLSVVVEEELYALDP 1122
             VPQSLY WPFFVDVGGEVYDP  N+WLEMP GMG+GWPARQAGTKLSV V+++LYALDP
Sbjct: 300  FVPQSLYCWPFFVDVGGEVYDPNLNSWLEMPIGMGEGWPARQAGTKLSVTVDDDLYALDP 359

Query: 1123 SSSLDSGKIKIYSHEDDAWKVVVGKVPINDFTDSESPYLLAGFLGRLHVITKDVNHDVVV 1302
            S+SLDS KIK+Y +E D WKV  G VPI+DFT+SESPYLLAG LG+LHVITKD NH++ V
Sbjct: 360  SNSLDSAKIKVYDYEGDTWKVAAGDVPIHDFTESESPYLLAGLLGKLHVITKDANHNITV 419

Query: 1303 LQADPHNR------SSSAPAPLIDSLGEQSDSLVESETDIWKVIATMNFGSAELVSCQVL 1464
            LQAD  N       S S  +   +S+ E ++S  E++ + WKV+AT +  SAELV+CQ L
Sbjct: 420  LQADMQNEHAESAFSQSILSSPDNSISEDAESSAETQGEFWKVLATRSGRSAELVNCQSL 479

Query: 1465 DI 1470
             I
Sbjct: 480  KI 481


>emb|CAN63480.1| hypothetical protein VITISV_011508 [Vitis vinifera]
          Length = 499

 Score =  601 bits (1550), Expect = e-169
 Identities = 299/465 (64%), Positives = 362/465 (77%), Gaps = 18/465 (3%)
 Frame = +1

Query: 112  SKTGTGEYNEILLQSASCKRQRMSCIPDEDNP--RLIPNLPDEISIQILARLPRIYYLNV 285
            SKT   E++E+ +   +CKRQR+S    E+N   RLIPNLPDEIS QILAR+PRI+YLN+
Sbjct: 10   SKTRFEEHSEVSVDE-TCKRQRLSSSISEENENVRLIPNLPDEISFQILARVPRIFYLNM 68

Query: 286  KLVSRSWKNAVTGTELFDLRKELGITEEWLYILTKVEEDKLLWHAFDPLSKKWQRLPPMP 465
            +LVSRSWK A+  TELF+LRKELG TEEWLYILTK+++DKLLW++ DPLS++WQRLPPMP
Sbjct: 69   RLVSRSWKGAIMSTELFNLRKELGTTEEWLYILTKIKDDKLLWYSLDPLSRRWQRLPPMP 128

Query: 466  PVAKGEEPRKVLAGL------------ADVIRNWLGRRDPLDRLPYCGCAIGAVDGCLYV 609
             VA  +  RK  +GL            ADVIR WLGRRD LDR+P+CG AIG VDGCLYV
Sbjct: 129  NVAHEDGYRKGFSGLRMLNMVGSSNKIADVIRGWLGRRDELDRIPFCGSAIGTVDGCLYV 188

Query: 610  LGGFSRASAVKCVWCFNPILNVWSEVESMSIGRAYCKTGVLKNKLYXXXXXXXXXXXLTP 789
            LGGFSRASA+  VW ++P+ N WSEV  MSIGRAYCKTGVL NKLY           L P
Sbjct: 189  LGGFSRASALTSVWRYDPVQNGWSEVSPMSIGRAYCKTGVLNNKLYVXGGVTRGRGGLIP 248

Query: 790  LQSAEVYDPCTGLWSEVPSMPFSKAQLLPTAFLADMLKPIATGMTTYRGRLCVPQSLYSW 969
            LQSAEV+DP TG+WS++PSMPF+KAQ+LPTAFLAD+LKPIATGMT+Y+G+L VPQSLY W
Sbjct: 249  LQSAEVFDPRTGVWSQIPSMPFAKAQVLPTAFLADLLKPIATGMTSYKGKLFVPQSLYYW 308

Query: 970  PFFVDVGGEVYDPESNTWLEMPSGMGDGWPARQAGTKLSVVVEEELYALDPSSSLDSGKI 1149
            PFFVDVGGEVYDPE+N+W EMP GMG+GWPARQAGTKL  +V++ELYALDPSSS D   I
Sbjct: 309  PFFVDVGGEVYDPETNSWFEMPVGMGEGWPARQAGTKLGAIVDDELYALDPSSSADIATI 368

Query: 1150 KIYSHEDDAWKVVVGKVPINDFTDSESPYLLAGFLGRLHVITKDVNHDVVVLQADPHNRS 1329
            K+Y ++ D+WKVV   VPI+DF ++ESPYLLA FLG+LHVITKD N++  VLQA+  N  
Sbjct: 369  KVYDYQCDSWKVVSTDVPIHDFAEAESPYLLASFLGKLHVITKDANNNFTVLQANMQNHL 428

Query: 1330 SSAP----APLIDSLGEQSDSLVESETDIWKVIATMNFGSAELVS 1452
             S P    +PL ++  EQ++S  ESETD+WKVIA  + G+ EL S
Sbjct: 429  HSFPLTPLSPLGNNSSEQTESXAESETDVWKVIAARSAGACELHS 473


Top