BLASTX nr result

ID: Coptis21_contig00010537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010537
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACR61392.1| phytoene synthase protein [Fragaria x ananassa]        347   2e-93
ref|XP_003519534.1| PREDICTED: phytoene synthase, chloroplastic-...   341   2e-91
ref|XP_003545292.1| PREDICTED: phytoene synthase, chloroplastic-...   339   7e-91
sp|Q9SSU8.1|PSY_DAUCA RecName: Full=Phytoene synthase, chloropla...   338   9e-91
gb|AFP65822.1| phytoene synthase, partial [Eriobotrya japonica]       337   3e-90

>gb|ACR61392.1| phytoene synthase protein [Fragaria x ananassa]
          Length = 398

 Score =  347 bits (890), Expect = 2e-93
 Identities = 177/246 (71%), Positives = 201/246 (81%), Gaps = 4/246 (1%)
 Frame = -2

Query: 728 K*EKGFSFVNFSP---EYSVLGSEVVRTSEEKVYEVVLKQAALVGEEKLLKRRSLDHRTE 558
           K  K  S ++FSP    YS   +   R+SEE+VYEVVLKQAALV E++  K ++LD    
Sbjct: 29  KRSKFCSRLSFSPGIIAYSGAVAHPPRSSEERVYEVVLKQAALVREQRRPKEKALDFDQR 88

Query: 557 -DAADAMTNPNLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERQRAIWAIYVWCRRTDELV 381
            + +D MTN +LLNEAYDRCGEVCAEYAKTFYLGTLLMTPER+RA+WAIYVWCRRTDELV
Sbjct: 89  IEGSDGMTNWDLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELV 148

Query: 380 DGPNASHITPMALDRWEQRLVDLFGGRPYDLYDAALSHTVSKYPIDIQPFKDMIDGMRLD 201
           DGPNAS+ITP ALDRWE+RL DLF GRPYD+YDAALS TV+KYP+DIQPFKDM++GMRLD
Sbjct: 149 DGPNASYITPKALDRWEKRLTDLFEGRPYDMYDAALSDTVTKYPVDIQPFKDMVEGMRLD 208

Query: 200 LKKARYKNFDELYLYCYYVAGTVGLMSVPVMGIAPNXXXXXXXXXXXXXALGIANQLTNI 21
           L+K+RY+NFDELYLYCYYVAGTVGLMSVPVMGIAP              ALGIANQLTNI
Sbjct: 209 LRKSRYQNFDELYLYCYYVAGTVGLMSVPVMGIAPESKASTESVYNAALALGIANQLTNI 268

Query: 20  LRDVGE 3
           LRDVGE
Sbjct: 269 LRDVGE 274


>ref|XP_003519534.1| PREDICTED: phytoene synthase, chloroplastic-like [Glycine max]
          Length = 399

 Score =  341 bits (874), Expect = 2e-91
 Identities = 175/248 (70%), Positives = 198/248 (79%), Gaps = 1/248 (0%)
 Frame = -2

Query: 743 GIKFKK*EKGFSFVNFSPEYS-VLGSEVVRTSEEKVYEVVLKQAALVGEEKLLKRRSLDH 567
           G + +K   G SF + +  +S  + +E +R+SEE+VYEVVLKQAALV E K   + +LD 
Sbjct: 30  GERTQKRFSGISFASGASAFSSAVAAETLRSSEERVYEVVLKQAALVKENKRGTKIALD- 88

Query: 566 RTEDAADAMTNPNLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERQRAIWAIYVWCRRTDE 387
             +D     TN +LLN AYDRCGEVCAEYAKTFYLGT LMT ER++AIWAIYVWCRRTDE
Sbjct: 89  LDKDVEGDFTNVDLLNAAYDRCGEVCAEYAKTFYLGTQLMTAERRKAIWAIYVWCRRTDE 148

Query: 386 LVDGPNASHITPMALDRWEQRLVDLFGGRPYDLYDAALSHTVSKYPIDIQPFKDMIDGMR 207
           LVDGPNASHITP ALDRWEQRL D+F GRPYD+YDAALSHTVSKYP+DIQPFKDMI+GMR
Sbjct: 149 LVDGPNASHITPGALDRWEQRLSDVFEGRPYDMYDAALSHTVSKYPVDIQPFKDMIEGMR 208

Query: 206 LDLKKARYKNFDELYLYCYYVAGTVGLMSVPVMGIAPNXXXXXXXXXXXXXALGIANQLT 27
           +DL+K+RY NFDELYLYCYYVAGTVGLMSVPVMGIAP              ALGIANQLT
Sbjct: 209 MDLRKSRYDNFDELYLYCYYVAGTVGLMSVPVMGIAPEANASTESIYNAALALGIANQLT 268

Query: 26  NILRDVGE 3
           NILRDVGE
Sbjct: 269 NILRDVGE 276


>ref|XP_003545292.1| PREDICTED: phytoene synthase, chloroplastic-like [Glycine max]
          Length = 400

 Score =  339 bits (869), Expect = 7e-91
 Identities = 176/249 (70%), Positives = 197/249 (79%), Gaps = 2/249 (0%)
 Frame = -2

Query: 743 GIKFKK*EKGFSFVNFSPEYS--VLGSEVVRTSEEKVYEVVLKQAALVGEEKLLKRRSLD 570
           G + +K   G SF + +  +S  V  +E  R+SEE+VYEVVLKQAALV E K   + +LD
Sbjct: 30  GERTQKRFSGISFASGTSAFSSAVAATETSRSSEERVYEVVLKQAALVKEHKRGTKIALD 89

Query: 569 HRTEDAADAMTNPNLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERQRAIWAIYVWCRRTD 390
              +  AD   N +LLN AYDRCGEVCAEYAKTFYLGT LMT ER++AIWAIYVWCRRTD
Sbjct: 90  LDKDVEAD-FNNVDLLNAAYDRCGEVCAEYAKTFYLGTQLMTAERRKAIWAIYVWCRRTD 148

Query: 389 ELVDGPNASHITPMALDRWEQRLVDLFGGRPYDLYDAALSHTVSKYPIDIQPFKDMIDGM 210
           ELVDGPNASHITP ALDRWEQRL D+F GRPYD+YDAALSHTVSKYP+DIQPFKDMI+GM
Sbjct: 149 ELVDGPNASHITPGALDRWEQRLSDVFEGRPYDMYDAALSHTVSKYPVDIQPFKDMIEGM 208

Query: 209 RLDLKKARYKNFDELYLYCYYVAGTVGLMSVPVMGIAPNXXXXXXXXXXXXXALGIANQL 30
           R+DL+K+RY NFDELYLYCYYVAGTVGLMSVPVMGIAP              ALGIANQL
Sbjct: 209 RVDLRKSRYNNFDELYLYCYYVAGTVGLMSVPVMGIAPESNASSESIYNAALALGIANQL 268

Query: 29  TNILRDVGE 3
           TNILRDVGE
Sbjct: 269 TNILRDVGE 277


>sp|Q9SSU8.1|PSY_DAUCA RecName: Full=Phytoene synthase, chloroplastic; Flags: Precursor
           gi|6002459|dbj|BAA84763.1| phytoene synthase [Daucus
           carota] gi|79154687|gb|ABB52067.1| putative phytoene
           synthase [Daucus carota subsp. sativus]
          Length = 398

 Score =  338 bits (868), Expect = 9e-91
 Identities = 175/245 (71%), Positives = 191/245 (77%), Gaps = 11/245 (4%)
 Frame = -2

Query: 704 VNFSPEYSVLGSEVVRTSEEKVYEVVLKQAALVGEEKLLKR-----------RSLDHRTE 558
           +  S   S + +  VRTSEE+VYEVVLKQAALV EEK   R           +S D    
Sbjct: 37  MKLSTGVSAVAANPVRTSEERVYEVVLKQAALVREEKRSSRGLCLDTKRTGSKSFDKSEN 96

Query: 557 DAADAMTNPNLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERQRAIWAIYVWCRRTDELVD 378
           D A  M + NLLNEAYDRCGEVCAEYAKTFYLGTLLMTPER+RA+WAIYVWCRRTDELVD
Sbjct: 97  DDA-GMKSWNLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVD 155

Query: 377 GPNASHITPMALDRWEQRLVDLFGGRPYDLYDAALSHTVSKYPIDIQPFKDMIDGMRLDL 198
           GPNASHITP ALDRWE+RL DLF G+PYD+YDAAL+ TVS YP+DIQPFKDMIDGMR+DL
Sbjct: 156 GPNASHITPKALDRWEKRLNDLFDGQPYDMYDAALADTVSTYPVDIQPFKDMIDGMRMDL 215

Query: 197 KKARYKNFDELYLYCYYVAGTVGLMSVPVMGIAPNXXXXXXXXXXXXXALGIANQLTNIL 18
           KK+RY+ FDELYLYCYYVAGTVGLMSVPVMGIAP              ALGIANQLTNIL
Sbjct: 216 KKSRYQTFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNIL 275

Query: 17  RDVGE 3
           RDVGE
Sbjct: 276 RDVGE 280


>gb|AFP65822.1| phytoene synthase, partial [Eriobotrya japonica]
          Length = 382

 Score =  337 bits (864), Expect = 3e-90
 Identities = 168/228 (73%), Positives = 188/228 (82%)
 Frame = -2

Query: 686 YSVLGSEVVRTSEEKVYEVVLKQAALVGEEKLLKRRSLDHRTEDAADAMTNPNLLNEAYD 507
           YS   +   R+SEEKVYEVVLKQAALV E   +K++SLD   E   D   N +LLN+AYD
Sbjct: 32  YSGAVANPARSSEEKVYEVVLKQAALVREPNTVKKKSLD-LDERITDGWNNWDLLNKAYD 90

Query: 506 RCGEVCAEYAKTFYLGTLLMTPERQRAIWAIYVWCRRTDELVDGPNASHITPMALDRWEQ 327
           RCGEVCAEYAKTFYLGTLLMTPER+RA+WAIYVWCRRTDELVDGPNAS+ITP ALDRWE+
Sbjct: 91  RCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASYITPKALDRWEK 150

Query: 326 RLVDLFGGRPYDLYDAALSHTVSKYPIDIQPFKDMIDGMRLDLKKARYKNFDELYLYCYY 147
           RL DLF GRPYD+ DAALS TV+KYP+DIQPF+DM++GMRLDL+K+RY+NFDELYLYCYY
Sbjct: 151 RLTDLFEGRPYDMLDAALSDTVTKYPVDIQPFRDMVEGMRLDLRKSRYQNFDELYLYCYY 210

Query: 146 VAGTVGLMSVPVMGIAPNXXXXXXXXXXXXXALGIANQLTNILRDVGE 3
           VAGTVGLMSVPVMGI P              ALGIANQLTNILRDVGE
Sbjct: 211 VAGTVGLMSVPVMGICPESRASTESVYNAALALGIANQLTNILRDVGE 258


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