BLASTX nr result

ID: Coptis21_contig00010501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010501
         (1175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307037.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-44
ref|XP_003630285.1| hypothetical protein MTR_8g093850 [Medicago ...   184   3e-44
gb|AFK47782.1| unknown [Lotus japonicus]                              179   2e-42
ref|XP_002866586.1| hypothetical protein ARALYDRAFT_496595 [Arab...   172   2e-40
dbj|BAA96904.1| unnamed protein product [Arabidopsis thaliana]        171   3e-40

>ref|XP_002307037.1| predicted protein [Populus trichocarpa] gi|222856486|gb|EEE94033.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score =  186 bits (471), Expect = 1e-44
 Identities = 123/305 (40%), Positives = 172/305 (56%), Gaps = 35/305 (11%)
 Frame = +1

Query: 1   GFEAFEPIFGKANAEWATKIXXXXXXXXXXXXXXXXHVHALDIYSLRIHVTDFHSYTFES 180
           GF+ FEPIF +    WA                   H+ A D   L+I VTD+HS TFE+
Sbjct: 3   GFQEFEPIFNEPRIGWAKN----SNPGSGLMDQFLMHIFAPDDNHLKIQVTDYHSNTFEA 58

Query: 181 IRSIQQFEDMRDDIGVGGSWSEFVDYVIESLKSDNVKLVVGSAKSMNSNADHGAKLAKLI 360
           ++S+ Q +DMRD IG+GGSW+EFV+Y++ S K+++VKLV+       S++D G   AKL+
Sbjct: 59  VKSVMQLDDMRDCIGIGGSWAEFVEYLVASFKAEDVKLVLEKL----SDSD-GVAYAKLV 113

Query: 361 AHKSKGMPRISISLDRLMESSASDAMANLSLQLFKAFKSKHTLPVKEEQEKCQQLTNKSS 540
           A KSKGMP ISISL +L++++A DAMAN+S  LFKAFK    L V +E+E   QLT   S
Sbjct: 114 AQKSKGMPLISISLTKLLDNAARDAMANMSFGLFKAFKRTKNL-VLQEKEHSLQLTKVIS 172

Query: 541 IEQARHEHIQNQHDPVLFSRKQKLQKLSTSDHIS----PVTTASSN----------LDLI 678
            E+ R E+IQ+Q       ++QKL+K+++SD +     P +  + N            +I
Sbjct: 173 AEKERSENIQSQ-----LGKRQKLEKMNSSDRLDVSGPPASNGAQNSPGCVLSLGGFQII 227

Query: 679 --------------SVSDEHK-------SPKKQPTQDSHSTKVGHRAVPAYRRAKVRGAV 795
                         +VS  +K          K   +D  STKV +R VPA+RRAKVRGA+
Sbjct: 228 CKLSASIYITECDDTVSSINKIFLNQIIDADKLAGRDPASTKVTNRVVPAFRRAKVRGAL 287

Query: 796 LGDTE 810
           L D E
Sbjct: 288 LQDIE 292


>ref|XP_003630285.1| hypothetical protein MTR_8g093850 [Medicago truncatula]
           gi|355524307|gb|AET04761.1| hypothetical protein
           MTR_8g093850 [Medicago truncatula]
          Length = 243

 Score =  184 bits (468), Expect = 3e-44
 Identities = 116/269 (43%), Positives = 159/269 (59%)
 Frame = +1

Query: 4   FEAFEPIFGKANAEWATKIXXXXXXXXXXXXXXXXHVHALDIYSLRIHVTDFHSYTFESI 183
           F+ FEPIF +   EW                    HVH  +   L IHVT+FHS T+E+ 
Sbjct: 3   FQDFEPIFAEPKLEWKPHCSHPLRPFLF-------HVHPPNSSHLVIHVTNFHSDTWEAH 55

Query: 184 RSIQQFEDMRDDIGVGGSWSEFVDYVIESLKSDNVKLVVGSAKSMNSNADHGAKLAKLIA 363
            S+   ED+ D IG+GGSWSEF +Y + SLKS+++KLV+      NSN+D G   AKLIA
Sbjct: 56  LSVSSLEDIMDIIGIGGSWSEFANYFVNSLKSEDLKLVL----EPNSNSD-GVSSAKLIA 110

Query: 364 HKSKGMPRISISLDRLMESSASDAMANLSLQLFKAFKSKHTLPVKEEQEKCQQLTNKSSI 543
            KSKGMP I+I L +L++SSAS+A++NLSL LFKAF+S     V + QE+  QLTN  + 
Sbjct: 111 QKSKGMPLITIPLTKLVDSSASEAVSNLSLSLFKAFRSTKCSLV-DVQERSVQLTNMMAS 169

Query: 544 EQARHEHIQNQHDPVLFSRKQKLQKLSTSDHISPVTTASSNLDLISVSDEHKSPKKQPTQ 723
           E+ R+E I          R+QK QK+S S+              +S +    SP KQ  +
Sbjct: 170 EKERNETIP-------LDRRQKFQKISDSEKAG-----------VSNNGAQNSPDKQKAR 211

Query: 724 DSHSTKVGHRAVPAYRRAKVRGAVLGDTE 810
           D+ +TKV +R +PA+RR KVRGA+L D++
Sbjct: 212 DTGTTKVKNRVMPAHRRTKVRGALLRDSD 240


>gb|AFK47782.1| unknown [Lotus japonicus]
          Length = 240

 Score =  179 bits (453), Expect = 2e-42
 Identities = 113/265 (42%), Positives = 158/265 (59%)
 Frame = +1

Query: 4   FEAFEPIFGKANAEWATKIXXXXXXXXXXXXXXXXHVHALDIYSLRIHVTDFHSYTFESI 183
           FE FEPIFG+   EWA                   H  A D   + + VTDFHS T+E+ 
Sbjct: 3   FEDFEPIFGEPKVEWAAH-------SSCPLRPFLFHATAPDSSHIVVCVTDFHSDTWEAR 55

Query: 184 RSIQQFEDMRDDIGVGGSWSEFVDYVIESLKSDNVKLVVGSAKSMNSNADHGAKLAKLIA 363
            S+   ED+RD IG+GGSW+EFV+Y + SLKS+++KLV+      NSN+D G   AKL+A
Sbjct: 56  LSVSFLEDIRDIIGIGGSWAEFVEYFVTSLKSEDLKLVL----EANSNSD-GVSHAKLVA 110

Query: 364 HKSKGMPRISISLDRLMESSASDAMANLSLQLFKAFKSKHTLPVKEEQEKCQQLTNKSSI 543
            KSKGMP I+I L +L++S+ ++AM+NLSL LF+AFK+  T  + +EQE+   LTN  + 
Sbjct: 111 QKSKGMPLITIPLTKLLDSAVNEAMSNLSLNLFRAFKN-ITCSLVKEQERSVWLTNMIAA 169

Query: 544 EQARHEHIQNQHDPVLFSRKQKLQKLSTSDHISPVTTASSNLDLISVSDEHKSPKKQPTQ 723
           E+A++E +Q ++        QK QK+S S+              +S +   KSP KQ  +
Sbjct: 170 EKAKNETLQTEY--------QKFQKISDSEKAG-----------VSTNGLKKSPDKQAAR 210

Query: 724 DSHSTKVGHRAVPAYRRAKVRGAVL 798
           D   TKV +R VP +RR KVRGA+L
Sbjct: 211 D---TKVKNRVVPVHRRTKVRGALL 232


>ref|XP_002866586.1| hypothetical protein ARALYDRAFT_496595 [Arabidopsis lyrata subsp.
           lyrata] gi|297312421|gb|EFH42845.1| hypothetical protein
           ARALYDRAFT_496595 [Arabidopsis lyrata subsp. lyrata]
          Length = 236

 Score =  172 bits (435), Expect = 2e-40
 Identities = 103/271 (38%), Positives = 155/271 (57%), Gaps = 2/271 (0%)
 Frame = +1

Query: 4   FEAFEPIFGKANAEWATKIXXXXXXXXXXXXXXXXHVHALDIYSLRIHVTDFHSYTFESI 183
           FE FEPIFG+   E +                   HV+A D Y+L +HVTDF S  + +I
Sbjct: 4   FEKFEPIFGEVVPEHSDP-------GSGLLRRCLFHVYASDSYNLTVHVTDFVSGVWATI 56

Query: 184 RSIQQFEDMRDDIGVGGSWSEFVDYVIESLKSDNVKLVVGSAKSMNSNADHGAKLAKLIA 363
            S+ Q +DMRD +G+GGSWSEF+DY + S+KSDNVKL++G     +++  +G K A+L++
Sbjct: 57  LSVSQLDDMRDTVGIGGSWSEFLDYTVASMKSDNVKLLLG-----DNSVSNGVKTARLVS 111

Query: 364 HKSKGMPRISISLDRLMESSASDAMANLSLQLFKAFKSKHTLPVKEEQEKCQQLTNKSSI 543
            K+KGMPR+ + L ++++SSAS+AMANLSL+LF+AFKSK  L  + E       T++   
Sbjct: 112 QKAKGMPRVIVPLTKMVDSSASEAMANLSLELFRAFKSKQHL--QGEVSSSAAATDEKDK 169

Query: 544 EQARHEHIQNQHDPVLFSRKQKLQKLSTSDHISPVTTASSNLDLISVSDEHK--SPKKQP 717
             A H  ++                             S  LD+++ S +++  SP KQ 
Sbjct: 170 RDATHNQVERY---------------------------SGKLDVMAPSTDNRQDSPAKQS 202

Query: 718 TQDSHSTKVGHRAVPAYRRAKVRGAVLGDTE 810
            ++ ++TK   R VPA+RR + RGA+L D+E
Sbjct: 203 AREGYTTKPVKR-VPAHRRTRKRGALLQDSE 232


>dbj|BAA96904.1| unnamed protein product [Arabidopsis thaliana]
          Length = 245

 Score =  171 bits (433), Expect = 3e-40
 Identities = 110/272 (40%), Positives = 158/272 (58%), Gaps = 3/272 (1%)
 Frame = +1

Query: 4   FEAFEPIFGKANAEWATKIXXXXXXXXXXXXXXXXHVHALDIYSLRIHVTDFHSYTFESI 183
           FE FEPIFG+   E +                   HV+A D Y+L +HVTDF S  + +I
Sbjct: 4   FEKFEPIFGEVVPERSDP-------GSGLLRRCLFHVYASDSYNLTVHVTDFISGVWTTI 56

Query: 184 RSIQQFEDMRDDIGVGGSWSEFVDYVIESLKSDNVKLVVGSAKSMNSNADHGAKLAKLIA 363
            S+ Q +DMRD +G+GGSWSEFVDY + SLKSDNVKL++G      ++  +G K A+L++
Sbjct: 57  LSVSQLDDMRDTVGIGGSWSEFVDYTVASLKSDNVKLLLG-----ETSVSNGVKTARLVS 111

Query: 364 HKSKGMPRISISLDRLMESSASDAMANLSLQLFKAFKSKHTLPVKEEQE-KCQQLTNKSS 540
            K+KGMPRI++ L +++ESSAS+AMANLSL+LF+AFKSK  L V       C     KS 
Sbjct: 112 QKAKGMPRINVPLTKMVESSASEAMANLSLELFRAFKSKQHLQVLNTAAIVCSYSGGKSR 171

Query: 541 I--EQARHEHIQNQHDPVLFSRKQKLQKLSTSDHISPVTTASSNLDLISVSDEHKSPKKQ 714
           +  +Q + +   NQ +   +SRK         D ++P           S ++   SP  Q
Sbjct: 172 LYCDQDKRDATYNQLE--RYSRK--------LDVMAP-----------STNNRQDSPANQ 210

Query: 715 PTQDSHSTKVGHRAVPAYRRAKVRGAVLGDTE 810
             +++ +TK   + VPA+RR + RGA+L D+E
Sbjct: 211 SAREA-NTKNPVKRVPAHRRTRKRGALLQDSE 241


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