BLASTX nr result

ID: Coptis21_contig00010264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010264
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593970.1| Monothiol glutaredoxin-S2 [Medicago truncatu...   122   7e-26
gb|ACJ83991.1| unknown [Medicago truncatula] gi|388516969|gb|AFK...   122   1e-25
ref|XP_002328608.1| glutaredoxin [Populus trichocarpa] gi|222838...   119   6e-25
ref|XP_002275384.1| PREDICTED: monothiol glutaredoxin-S2 [Vitis ...   119   8e-25
gb|AFK39077.1| unknown [Lotus japonicus]                              118   1e-24

>ref|XP_003593970.1| Monothiol glutaredoxin-S2 [Medicago truncatula]
           gi|355483018|gb|AES64221.1| Monothiol glutaredoxin-S2
           [Medicago truncatula]
          Length = 102

 Score =  122 bits (307), Expect = 7e-26
 Identities = 58/89 (65%), Positives = 72/89 (80%)
 Frame = -3

Query: 550 VARLASRSAVVIFSKTTCCMSHTIKTLFHELRVNFAVHELDQDRNGREMERVLLTLGCKP 371
           V +LAS  +VVIFSK++CCM HTIKTLF +  VN  VHELD+   GR++E+ LL LGC P
Sbjct: 4   VTQLASERSVVIFSKSSCCMCHTIKTLFSDFGVNPEVHELDEMSGGRDIEQALLRLGCNP 63

Query: 370 AIPAVFIGGALIGGANEIMSLHLSGSLIP 284
           ++PAVFIGG L+GGANE+MSLHL+ SLIP
Sbjct: 64  SVPAVFIGGELVGGANEVMSLHLNRSLIP 92


>gb|ACJ83991.1| unknown [Medicago truncatula] gi|388516969|gb|AFK46546.1| unknown
           [Medicago truncatula]
          Length = 102

 Score =  122 bits (305), Expect = 1e-25
 Identities = 58/89 (65%), Positives = 71/89 (79%)
 Frame = -3

Query: 550 VARLASRSAVVIFSKTTCCMSHTIKTLFHELRVNFAVHELDQDRNGREMERVLLTLGCKP 371
           V +LAS  +VVIFSK++CCM HTIKTLF +  VN  VHELD+   GR+ E+ LL LGC P
Sbjct: 4   VTQLASERSVVIFSKSSCCMCHTIKTLFSDFGVNPEVHELDEMSGGRDTEQALLRLGCNP 63

Query: 370 AIPAVFIGGALIGGANEIMSLHLSGSLIP 284
           ++PAVFIGG L+GGANE+MSLHL+ SLIP
Sbjct: 64  SVPAVFIGGELVGGANEVMSLHLNRSLIP 92


>ref|XP_002328608.1| glutaredoxin [Populus trichocarpa] gi|222838590|gb|EEE76955.1|
           glutaredoxin [Populus trichocarpa]
          Length = 101

 Score =  119 bits (299), Expect = 6e-25
 Identities = 60/89 (67%), Positives = 69/89 (77%)
 Frame = -3

Query: 550 VARLASRSAVVIFSKTTCCMSHTIKTLFHELRVNFAVHELDQDRNGREMERVLLTLGCKP 371
           V  LAS   VVIFSK+TCCM HTIKTLF+E  VN AVHELD+   GRE+E+ L   GC P
Sbjct: 4   VTNLASERPVVIFSKSTCCMCHTIKTLFNEFGVNVAVHELDEMPRGREIEQALSRFGC-P 62

Query: 370 AIPAVFIGGALIGGANEIMSLHLSGSLIP 284
            +PAVFIGG L+GGANE+MSLHL+ SLIP
Sbjct: 63  TLPAVFIGGELVGGANEVMSLHLNRSLIP 91


>ref|XP_002275384.1| PREDICTED: monothiol glutaredoxin-S2 [Vitis vinifera]
           gi|297736899|emb|CBI26100.3| unnamed protein product
           [Vitis vinifera]
          Length = 103

 Score =  119 bits (298), Expect = 8e-25
 Identities = 58/89 (65%), Positives = 68/89 (76%)
 Frame = -3

Query: 550 VARLASRSAVVIFSKTTCCMSHTIKTLFHELRVNFAVHELDQDRNGREMERVLLTLGCKP 371
           VARLAS   VVIFSK++CCM HTIKTLF +  VN AVHELD+   GRE+E+ L  LGC P
Sbjct: 5   VARLASERPVVIFSKSSCCMCHTIKTLFSDFGVNPAVHELDEMPRGREIEQALARLGCNP 64

Query: 370 AIPAVFIGGALIGGANEIMSLHLSGSLIP 284
            +P VFIGG  +GG NEIM+LHL+ SLIP
Sbjct: 65  TVPTVFIGGERVGGTNEIMTLHLNRSLIP 93


>gb|AFK39077.1| unknown [Lotus japonicus]
          Length = 102

 Score =  118 bits (296), Expect = 1e-24
 Identities = 57/89 (64%), Positives = 69/89 (77%)
 Frame = -3

Query: 550 VARLASRSAVVIFSKTTCCMSHTIKTLFHELRVNFAVHELDQDRNGREMERVLLTLGCKP 371
           V  LAS  +VVIFSK+TCCM HTI TLF +  VN  VHE+D+   GR++E+ L  LGC P
Sbjct: 4   VTTLASERSVVIFSKSTCCMCHTIITLFSDFGVNPTVHEIDEMPRGRDIEQALSRLGCSP 63

Query: 370 AIPAVFIGGALIGGANEIMSLHLSGSLIP 284
           A+PAVFIGG L+GGANE+MSLHL+ SLIP
Sbjct: 64  AVPAVFIGGELVGGANEVMSLHLNRSLIP 92


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