BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010166
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]    77   1e-17
ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloro...    77   1e-17
ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like...    76   8e-17
ref|XP_003543816.1| PREDICTED: 50S ribosomal protein L7/L12-like...    71   9e-15
ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|2...    72   2e-14

>emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]
          Length = 615

 Score = 76.6 bits (187), Expect(2) = 1e-17
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = -3

Query: 126 AAKIKIINEVQTFTDLGLKEAKDLLEKVPVVLKKGVTKEEGN 1
           AAKIKII EV+TFTDLGLKEAKDL+EK PVVLKKGVTKEEGN
Sbjct: 558 AAKIKIIKEVRTFTDLGLKEAKDLVEKAPVVLKKGVTKEEGN 599



 Score = 38.1 bits (87), Expect(2) = 1e-17
 Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -2

Query: 376 ILYRLKLGLNQYGMAISGL-DXXXXXXXXXXXXXXXXXXXXXAFEIKLEKFD 224
           IL+RLKLGLN+YG A+SGL                       AF+IKLEKFD
Sbjct: 505 ILFRLKLGLNKYGPAVSGLASADSASAGSGSAPADAKAAEKTAFDIKLEKFD 556


>ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
           vinifera]
          Length = 165

 Score = 76.6 bits (187), Expect(2) = 1e-17
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = -3

Query: 126 AAKIKIINEVQTFTDLGLKEAKDLLEKVPVVLKKGVTKEEGN 1
           AAKIKII EV+TFTDLGLKEAKDL+EK PVVLKKGVTKEEGN
Sbjct: 108 AAKIKIIKEVRTFTDLGLKEAKDLVEKAPVVLKKGVTKEEGN 149



 Score = 38.1 bits (87), Expect(2) = 1e-17
 Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -2

Query: 376 ILYRLKLGLNQYGMAISGL-DXXXXXXXXXXXXXXXXXXXXXAFEIKLEKFD 224
           IL+RLKLGLN+YG A+SGL                       AF+IKLEKFD
Sbjct: 55  ILFRLKLGLNKYGPAVSGLASADSASAGSGSAPADAKAAEKTAFDIKLEKFD 106


>ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like [Cucumis sativus]
           gi|449499867|ref|XP_004160938.1| PREDICTED: 50S
           ribosomal protein L7/L12-like [Cucumis sativus]
          Length = 168

 Score = 75.9 bits (185), Expect(2) = 8e-17
 Identities = 37/42 (88%), Positives = 41/42 (97%)
 Frame = -3

Query: 126 AAKIKIINEVQTFTDLGLKEAKDLLEKVPVVLKKGVTKEEGN 1
           AAKIKII EV+TFTDLGLKEAKDL+EKVPVVLKKGVTK++GN
Sbjct: 111 AAKIKIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGN 152



 Score = 35.8 bits (81), Expect(2) = 8e-17
 Identities = 21/51 (41%), Positives = 26/51 (50%)
 Frame = -2

Query: 376 ILYRLKLGLNQYGMAISGLDXXXXXXXXXXXXXXXXXXXXXAFEIKLEKFD 224
           IL+R K+GLN+YG A+SGL                       F+IKLEKFD
Sbjct: 60  ILFRYKMGLNKYGPAVSGLS-APGSAAAGSAAAETKEAEKTVFDIKLEKFD 109


>ref|XP_003543816.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 161

 Score = 71.2 bits (173), Expect(2) = 9e-15
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = -3

Query: 126 AAKIKIINEVQTFTDLGLKEAKDLLEKVPVVLKKGVTKEEGN 1
           AAKIKII EV++FTDLGLKEAKDL+EKVP VLKKG+TKEE N
Sbjct: 104 AAKIKIIKEVRSFTDLGLKEAKDLVEKVPCVLKKGLTKEEAN 145



 Score = 33.5 bits (75), Expect(2) = 9e-15
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -2

Query: 376 ILYRLKLGLNQYGMAISGLDXXXXXXXXXXXXXXXXXXXXXAFEIKLEKFD 224
           +L+RLK+GL++YG  ++G+                      AF++KLEK+D
Sbjct: 52  VLWRLKMGLHRYGAPVAGMTMPSVGAAARAEAGAAAVAEKMAFDLKLEKYD 102


>ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|222839078|gb|EEE77429.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score = 72.0 bits (175), Expect(2) = 2e-14
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = -3

Query: 126 AAKIKIINEVQTFTDLGLKEAKDLLEKVPVVLKKGVTKEE 7
           AAKIK+I EV+TFTDLGLKEAKDL+EKVPVVLKKG+TKEE
Sbjct: 116 AAKIKVIKEVRTFTDLGLKEAKDLVEKVPVVLKKGLTKEE 155



 Score = 32.0 bits (71), Expect(2) = 2e-14
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = -2

Query: 376 ILYRLKLGLNQYGMAISG--LDXXXXXXXXXXXXXXXXXXXXXAFEIKLEKFD 224
           IL+R K+GL +YG A+SG  L                      AF+IKLEKFD
Sbjct: 62  ILFRHKMGLGRYGPAVSGAILSGPAAPGSASGDVKTAAAAEKTAFDIKLEKFD 114