BLASTX nr result

ID: Coptis21_contig00009984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009984
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534097.1| conserved hypothetical protein [Ricinus comm...    67   3e-09
ref|XP_002313142.1| predicted protein [Populus trichocarpa] gi|2...    66   5e-09
ref|XP_003577057.1| PREDICTED: uncharacterized protein LOC100837...    64   1e-08
ref|XP_002285342.1| PREDICTED: uncharacterized protein LOC100243...    64   1e-08
emb|CAN60918.1| hypothetical protein VITISV_019333 [Vitis vinifera]    64   1e-08

>ref|XP_002534097.1| conserved hypothetical protein [Ricinus communis]
           gi|223525852|gb|EEF28285.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 157

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/55 (58%), Positives = 39/55 (70%)
 Frame = -3

Query: 566 PGQRHDLTNVKLNSKTRQKLVEKEGRQLKAVLSNPVFLLDPLAAIHQHLERTQPV 402
           P Q      +KLN K+RQKL+ KEG+QL AVL++P F  DPL AIH HL+ TQPV
Sbjct: 70  PQQPTTAAELKLNCKSRQKLILKEGKQLSAVLNHPAFRSDPLGAIHHHLQSTQPV 124


>ref|XP_002313142.1| predicted protein [Populus trichocarpa] gi|222849550|gb|EEE87097.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 32/55 (58%), Positives = 38/55 (69%)
 Frame = -3

Query: 566 PGQRHDLTNVKLNSKTRQKLVEKEGRQLKAVLSNPVFLLDPLAAIHQHLERTQPV 402
           P Q       KLNSK+RQKL+ KEG+QL  VL++P F  DPL +IHQHL  TQPV
Sbjct: 70  PQQSKPTAEFKLNSKSRQKLILKEGKQLSMVLNHPAFQADPLGSIHQHLLSTQPV 124


>ref|XP_003577057.1| PREDICTED: uncharacterized protein LOC100837304 [Brachypodium
           distachyon]
          Length = 405

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/47 (65%), Positives = 36/47 (76%)
 Frame = -3

Query: 545 TNVKLNSKTRQKLVEKEGRQLKAVLSNPVFLLDPLAAIHQHLERTQP 405
           T VKLN K++Q LV++E  QL AVL+NP F LDP AAIHQHL  TQP
Sbjct: 319 TEVKLNCKSKQALVQRESAQLNAVLNNPQFQLDPFAAIHQHLLSTQP 365


>ref|XP_002285342.1| PREDICTED: uncharacterized protein LOC100243540 [Vitis vinifera]
           gi|296090453|emb|CBI40272.3| unnamed protein product
           [Vitis vinifera]
          Length = 156

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/48 (62%), Positives = 38/48 (79%)
 Frame = -3

Query: 548 LTNVKLNSKTRQKLVEKEGRQLKAVLSNPVFLLDPLAAIHQHLERTQP 405
           +T  K+N K+RQKL+ KEG QL+ VL++P+F  DPLAAIHQHL  TQP
Sbjct: 77  VTEFKVNCKSRQKLIMKEGDQLRTVLNHPIFHSDPLAAIHQHLLSTQP 124


>emb|CAN60918.1| hypothetical protein VITISV_019333 [Vitis vinifera]
          Length = 156

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/48 (62%), Positives = 38/48 (79%)
 Frame = -3

Query: 548 LTNVKLNSKTRQKLVEKEGRQLKAVLSNPVFLLDPLAAIHQHLERTQP 405
           +T  K+N K+RQKL+ KEG QL+ VL++P+F  DPLAAIHQHL  TQP
Sbjct: 77  VTEFKVNCKSRQKLIMKEGDQLRTVLNHPIFHSDPLAAIHQHLLSTQP 124


Top