BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009980
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269617.1| PREDICTED: ferredoxin-1, chloroplastic-like ...   196   4e-48
gb|AEI83424.1| chloroplast ferredoxin I [Camellia sinensis]           191   2e-46
gb|AFK35324.1| unknown [Lotus japonicus]                              186   6e-45
ref|XP_002888117.1| fed A [Arabidopsis lyrata subsp. lyrata] gi|...   181   2e-43
ref|NP_176291.1| ferredoxin-2 [Arabidopsis thaliana] gi|119975|s...   180   4e-43

>ref|XP_002269617.1| PREDICTED: ferredoxin-1, chloroplastic-like [Vitis vinifera]
          Length = 142

 Score =  196 bits (499), Expect = 4e-48
 Identities = 94/137 (68%), Positives = 110/137 (80%)
 Frame = +2

Query: 173 TLSGTMFNTSFVRRQPAMSLRSLPNVGQALFGVKAGRGRITAMASYKVTLITPEGKEEFE 352
           TLSG M +TSF+RRQP  SLR+LPNVGQALFG+KAGRGR+TAMA YKV LITPEG +EFE
Sbjct: 3   TLSGAMVSTSFIRRQPVTSLRALPNVGQALFGLKAGRGRVTAMAVYKVKLITPEGAKEFE 62

Query: 353 CPDDVYILDQAEEVGIDVPYXXXXXXXXXXXXKIVAGAVDQSDQSFLDDEQIGAGFVLTC 532
           CPDDVY+LD AEE+GID+PY            ++V G VDQSD SFL+DEQ+  G+VLTC
Sbjct: 63  CPDDVYVLDHAEEIGIDLPYSCRAGSCSSCAGRVVEGTVDQSDGSFLEDEQMEEGWVLTC 122

Query: 533 IAYPTSDVTIETHKEEE 583
           +AYP SD+ IETHKEEE
Sbjct: 123 VAYPQSDLVIETHKEEE 139


>gb|AEI83424.1| chloroplast ferredoxin I [Camellia sinensis]
          Length = 147

 Score =  191 bits (485), Expect = 2e-46
 Identities = 97/144 (67%), Positives = 112/144 (77%), Gaps = 2/144 (1%)
 Frame = +2

Query: 158 MAASTTLSGTMFNTSFVRRQ-PAMSLRSLPNVGQALFGVKAGRG-RITAMASYKVTLITP 331
           MA + +LS TM +TSF++RQ P  SLRSLPNVGQALFGVK GRG R+TAMA YKV L+TP
Sbjct: 1   MAMAASLSSTMVSTSFLQRQQPVTSLRSLPNVGQALFGVKGGRGGRVTAMAMYKVKLLTP 60

Query: 332 EGKEEFECPDDVYILDQAEEVGIDVPYXXXXXXXXXXXXKIVAGAVDQSDQSFLDDEQIG 511
           EG +EFECPDDVYILDQAEE+GID+PY            K+  G VDQSD SFLDD+Q+ 
Sbjct: 61  EGPQEFECPDDVYILDQAEEIGIDLPYSCRAGSCSSCAGKLTGGKVDQSDGSFLDDDQMD 120

Query: 512 AGFVLTCIAYPTSDVTIETHKEEE 583
            G+VLTC+AYP SDV IETHKEEE
Sbjct: 121 GGWVLTCVAYPQSDVVIETHKEEE 144


>gb|AFK35324.1| unknown [Lotus japonicus]
          Length = 142

 Score =  186 bits (471), Expect = 6e-45
 Identities = 95/142 (66%), Positives = 106/142 (74%)
 Frame = +2

Query: 158 MAASTTLSGTMFNTSFVRRQPAMSLRSLPNVGQALFGVKAGRGRITAMASYKVTLITPEG 337
           MA +  LSGTM NTSF+RRQP   L++ PNVGQALFG+K+G G    MA+YKV LITPEG
Sbjct: 1   MATTPALSGTMVNTSFLRRQP---LKAFPNVGQALFGLKSGCGGRVTMAAYKVKLITPEG 57

Query: 338 KEEFECPDDVYILDQAEEVGIDVPYXXXXXXXXXXXXKIVAGAVDQSDQSFLDDEQIGAG 517
             EFECPDDVYILD AEE GID+PY            K+V G VDQSD SFLDD+QI AG
Sbjct: 58  PFEFECPDDVYILDHAEEQGIDIPYSCRAGSCSSCAGKVVGGNVDQSDGSFLDDDQIDAG 117

Query: 518 FVLTCIAYPTSDVTIETHKEEE 583
           FVLTC+AYP SDV IETHKEEE
Sbjct: 118 FVLTCVAYPQSDVVIETHKEEE 139


>ref|XP_002888117.1| fed A [Arabidopsis lyrata subsp. lyrata]
           gi|297333958|gb|EFH64376.1| fed A [Arabidopsis lyrata
           subsp. lyrata]
          Length = 148

 Score =  181 bits (458), Expect = 2e-43
 Identities = 94/147 (63%), Positives = 112/147 (76%), Gaps = 5/147 (3%)
 Frame = +2

Query: 164 ASTTLSGTMFNTSFVRRQPA-MSLRSLPNVG-QALFGVKAGR---GRITAMASYKVTLIT 328
           AST LS  +  TSF+RR PA +SLRSLP+   Q+LFG+K+G    GR+TAMA+YKV  IT
Sbjct: 2   ASTALSSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFIT 61

Query: 329 PEGKEEFECPDDVYILDQAEEVGIDVPYXXXXXXXXXXXXKIVAGAVDQSDQSFLDDEQI 508
           PEG++E EC DDVY+LD AEE GID+PY            K+V+G+VDQSDQSFLDDEQI
Sbjct: 62  PEGEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQI 121

Query: 509 GAGFVLTCIAYPTSDVTIETHKEEECV 589
           G GFVLTC AYPTSDVTIETHKE++ V
Sbjct: 122 GQGFVLTCAAYPTSDVTIETHKEDDLV 148


>ref|NP_176291.1| ferredoxin-2 [Arabidopsis thaliana]
           gi|119975|sp|P16972.1|FER2_ARATH RecName:
           Full=Ferredoxin-2, chloroplastic; Short=AtFd2; Flags:
           Precursor gi|11692908|gb|AAG40057.1|AF324706_1 At1g60950
           [Arabidopsis thaliana]
           gi|11908076|gb|AAG41467.1|AF326885_1 putative ferrodoxin
           precursor protein [Arabidopsis thaliana]
           gi|12323344|gb|AAG51652.1|AC018908_18 ferrodoxin
           precursor; 39650-40096 [Arabidopsis thaliana]
           gi|12642890|gb|AAK00387.1|AF339705_1 putative ferrodoxin
           precursor protein [Arabidopsis thaliana]
           gi|16437|emb|CAA35754.1| ferredoxin precursor
           [Arabidopsis thaliana] gi|166698|gb|AAA32790.1|
           ferrodoxin A [Arabidopsis thaliana]
           gi|20260270|gb|AAM13033.1| ferrodoxin precursor
           [Arabidopsis thaliana] gi|22136516|gb|AAM91336.1|
           ferrodoxin precursor [Arabidopsis thaliana]
           gi|110740859|dbj|BAE98526.1| ferrodoxin precursor
           [Arabidopsis thaliana] gi|332195631|gb|AEE33752.1|
           ferredoxin-2 [Arabidopsis thaliana]
          Length = 148

 Score =  180 bits (456), Expect = 4e-43
 Identities = 95/147 (64%), Positives = 111/147 (75%), Gaps = 5/147 (3%)
 Frame = +2

Query: 164 ASTTLSGTMFNTSFVRRQPA-MSLRSLPNVG-QALFGVKAGR---GRITAMASYKVTLIT 328
           AST LS  +  TSF+RR PA +SLRSLP+   Q+LFG+K+G    GR+TAMA+YKV  IT
Sbjct: 2   ASTALSSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFIT 61

Query: 329 PEGKEEFECPDDVYILDQAEEVGIDVPYXXXXXXXXXXXXKIVAGAVDQSDQSFLDDEQI 508
           PEG+ E EC DDVY+LD AEE GID+PY            K+V+G+VDQSDQSFLDDEQI
Sbjct: 62  PEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQI 121

Query: 509 GAGFVLTCIAYPTSDVTIETHKEEECV 589
           G GFVLTC AYPTSDVTIETHKEE+ V
Sbjct: 122 GEGFVLTCAAYPTSDVTIETHKEEDIV 148