BLASTX nr result

ID: Coptis21_contig00009974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009974
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15836.3| unnamed protein product [Vitis vinifera]              101   8e-20
ref|XP_002269081.1| PREDICTED: uncharacterized protein LOC100267...   101   1e-19
ref|XP_003553225.1| PREDICTED: uncharacterized protein LOC100306...    89   5e-16
gb|AFK47458.1| unknown [Medicago truncatula]                           87   2e-15
ref|XP_002325654.1| predicted protein [Populus trichocarpa] gi|2...    86   6e-15

>emb|CBI15836.3| unnamed protein product [Vitis vinifera]
          Length = 119

 Score =  101 bits (252), Expect = 8e-20
 Identities = 49/85 (57%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
 Frame = -2

Query: 456 KMCPLRLILLFLSATLAGFFVLRNFKSKPE--EEQVSQPIKTIDQSSDSLPRSKKIVSGI 283
           +MCPLRLIL+FLSATLAGFFVLRN KS+P+   +  +   +  +   DS P+S K++S I
Sbjct: 32  EMCPLRLILIFLSATLAGFFVLRNLKSQPQVVADAPADGDRDDNDPHDSTPKSSKVLSAI 91

Query: 282 CTGFWVCVDMASGKYLWRNLTSAGK 208
            +GFW CVDMASG+YLWR+L S+ K
Sbjct: 92  GSGFWTCVDMASGRYLWRHLVSSSK 116


>ref|XP_002269081.1| PREDICTED: uncharacterized protein LOC100267277 [Vitis vinifera]
          Length = 87

 Score =  101 bits (251), Expect = 1e-19
 Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
 Frame = -2

Query: 453 MCPLRLILLFLSATLAGFFVLRNFKSKPE--EEQVSQPIKTIDQSSDSLPRSKKIVSGIC 280
           MCPLRLIL+FLSATLAGFFVLRN KS+P+   +  +   +  +   DS P+S K++S I 
Sbjct: 1   MCPLRLILIFLSATLAGFFVLRNLKSQPQVVADAPADGDRDDNDPHDSTPKSSKVLSAIG 60

Query: 279 TGFWVCVDMASGKYLWRNLTSAGK 208
           +GFW CVDMASG+YLWR+L S+ K
Sbjct: 61  SGFWTCVDMASGRYLWRHLVSSSK 84


>ref|XP_003553225.1| PREDICTED: uncharacterized protein LOC100306619 [Glycine max]
           gi|255629099|gb|ACU14894.1| unknown [Glycine max]
          Length = 89

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 4/83 (4%)
 Frame = -2

Query: 453 MCPLRLILLFLSATLAGFFVLRNFKSKP---EEEQVSQPIKTIDQSSD-SLPRSKKIVSG 286
           MCPLRLIL+FLSATLAGFFVLRN +S+P   E++ V  P   I  SSD S   + K+ + 
Sbjct: 1   MCPLRLILIFLSATLAGFFVLRNLRSQPQIEEDDAVVPPNPKISDSSDASSNGTSKVRAV 60

Query: 285 ICTGFWVCVDMASGKYLWRNLTS 217
           + +GFW  VDMASG+YLWR+L S
Sbjct: 61  VESGFWTFVDMASGRYLWRHLVS 83


>gb|AFK47458.1| unknown [Medicago truncatula]
          Length = 91

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 5/90 (5%)
 Frame = -2

Query: 453 MCPLRLILLFLSATLAGFFVLRNFKSKPEEEQVSQPI-----KTIDQSSDSLPRSKKIVS 289
           MCPLRLIL+FLSATLAG FVLRNF+++P+ +   + +     K  D S+ S   + K+ +
Sbjct: 1   MCPLRLILIFLSATLAGIFVLRNFRNQPKIDDEDEDLAPTNPKISDSSNASSNENSKVRA 60

Query: 288 GICTGFWVCVDMASGKYLWRNLTSAGKNDS 199
            I +GFW  VDMASG+YLWR++ S+    S
Sbjct: 61  VIESGFWTFVDMASGRYLWRHMVSSSSKKS 90


>ref|XP_002325654.1| predicted protein [Populus trichocarpa] gi|222862529|gb|EEF00036.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 48/98 (48%), Positives = 58/98 (59%), Gaps = 13/98 (13%)
 Frame = -2

Query: 453 MCPLRLILLFLSATLAGFFVLRNFKSKP-----EEEQVSQPIKTIDQS--------SDSL 313
           MCPLRLIL+FLSATLAGFFV++N KS+P     +         T D +        S S 
Sbjct: 1   MCPLRLILVFLSATLAGFFVIKNLKSRPFSASTDTGDDDNSTTTTDSNKNSPHPSDSSSS 60

Query: 312 PRSKKIVSGICTGFWVCVDMASGKYLWRNLTSAGKNDS 199
            R  K+ SG+  GFW  VDMASGKYLWR L  + K +S
Sbjct: 61  SRFSKVKSGVEMGFWTLVDMASGKYLWRQLGFSSKRES 98


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