BLASTX nr result

ID: Coptis21_contig00009963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009963
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517012.1| hypothetical protein RCOM_0908960 [Ricinus c...    65   6e-09
ref|XP_003631971.1| PREDICTED: uncharacterized protein LOC100853...    61   8e-08
emb|CBI26371.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_002312573.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_003610789.1| hypothetical protein MTR_5g007040 [Medicago ...    55   6e-06

>ref|XP_002517012.1| hypothetical protein RCOM_0908960 [Ricinus communis]
           gi|223543647|gb|EEF45175.1| hypothetical protein
           RCOM_0908960 [Ricinus communis]
          Length = 1067

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/75 (48%), Positives = 43/75 (57%)
 Frame = -3

Query: 259 DYNGGPSTELGLSLDPANVCTQPERQTDTXXXXXXXXNSRDEMVFLKTTPVSELVWSPHK 80
           D N  PST L L+L  +N C Q  R             S  ++ F+ T P+SELVWSPHK
Sbjct: 5   DKNIEPSTNLSLALGYSNQCIQ--RNLSNDPGAGANAASTADITFVATDPLSELVWSPHK 62

Query: 79  GLSLKCADCSLSDKK 35
           GLSL+CAD S  DKK
Sbjct: 63  GLSLRCADGSFIDKK 77


>ref|XP_003631971.1| PREDICTED: uncharacterized protein LOC100853028 [Vitis vinifera]
          Length = 714

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
 Frame = -3

Query: 304 NGCPAERMIVQKSNIDYNGGPST-ELGLSLDPANVCTQPERQTDTXXXXXXXXNSRDEMV 128
           +G P E +I  K N D +      +LGL+L  ++ C       D+         SR +M 
Sbjct: 12  SGLPIEEIIQPKMNADNDNKEQLFDLGLALGYSSQCIGKALNNDSGAGANAG--SRVDMT 69

Query: 127 FLKTTPVSELVWSPHKGLSLKCADCSLSDKK 35
            + T P+SELVWSPHKGLSLKCA+ S  +K+
Sbjct: 70  LVATDPLSELVWSPHKGLSLKCAENSTDEKR 100


>emb|CBI26371.3| unnamed protein product [Vitis vinifera]
          Length = 975

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
 Frame = -3

Query: 304 NGCPAERMIVQKSNIDYNGGPST-ELGLSLDPANVCTQPERQTDTXXXXXXXXNSRDEMV 128
           +G P E +I  K N D +      +LGL+L  ++ C       D+         SR +M 
Sbjct: 60  SGLPIEEIIQPKMNADNDNKEQLFDLGLALGYSSQCIGKALNNDSGAGANAG--SRVDMT 117

Query: 127 FLKTTPVSELVWSPHKGLSLKCADCSLSDKK 35
            + T P+SELVWSPHKGLSLKCA+ S  +K+
Sbjct: 118 LVATDPLSELVWSPHKGLSLKCAENSTDEKR 148


>ref|XP_002312573.1| predicted protein [Populus trichocarpa] gi|222852393|gb|EEE89940.1|
           predicted protein [Populus trichocarpa]
          Length = 970

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/75 (44%), Positives = 43/75 (57%)
 Frame = -3

Query: 259 DYNGGPSTELGLSLDPANVCTQPERQTDTXXXXXXXXNSRDEMVFLKTTPVSELVWSPHK 80
           D N  P  +LG SL  +N C Q   + D+         S  +M F+ T  +SELVWSP K
Sbjct: 5   DKNIEPVIDLGFSLGYSNQCIQRRLKNDSGAGANAA--SSVDMTFVATNALSELVWSPKK 62

Query: 79  GLSLKCADCSLSDKK 35
           GLSLKCAD + S++K
Sbjct: 63  GLSLKCADGTFSNQK 77


>ref|XP_003610789.1| hypothetical protein MTR_5g007040 [Medicago truncatula]
           gi|355512124|gb|AES93747.1| hypothetical protein
           MTR_5g007040 [Medicago truncatula]
          Length = 845

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/71 (43%), Positives = 39/71 (54%)
 Frame = -3

Query: 244 PSTELGLSLDPANVCTQPERQTDTXXXXXXXXNSRDEMVFLKTTPVSELVWSPHKGLSLK 65
           P T+  L L+ AN C     + D+         SR +M    T P+SELVWS  KGLSLK
Sbjct: 11  PKTDSELFLNNANQCDWKNLKNDSCAGANAA--SRADMTLATTDPLSELVWSSDKGLSLK 68

Query: 64  CADCSLSDKKT 32
           CAD S +DK +
Sbjct: 69  CADSSFADKNS 79


Top