BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009961
         (802 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276795.1| PREDICTED: protein TIC 20-II, chloroplastic ...   240   2e-61
ref|XP_002328962.1| predicted protein [Populus trichocarpa] gi|1...   221   1e-55
ref|XP_004139099.1| PREDICTED: protein TIC 20-II, chloroplastic-...   211   1e-52
ref|NP_566112.1| uncharacterized protein [Arabidopsis thaliana] ...   197   3e-48
ref|XP_002882135.1| hypothetical protein ARALYDRAFT_483969 [Arab...   196   4e-48

>ref|XP_002276795.1| PREDICTED: protein TIC 20-II, chloroplastic [Vitis vinifera]
           gi|147792791|emb|CAN71033.1| hypothetical protein
           VITISV_000355 [Vitis vinifera]
          Length = 218

 Score =  240 bits (613), Expect = 2e-61
 Identities = 131/221 (59%), Positives = 159/221 (71%), Gaps = 8/221 (3%)
 Frame = +3

Query: 6   MAATTLLRFSLHPSP--QTLKSPFISHT---PLPHYNFPAPRISPIKLSHKS--SNSKPI 164
           MA+  LLR SLH     + L  P+ + +    LP  NFP P    +++S +     S+P 
Sbjct: 1   MASIPLLRLSLHRQTPLKPLHQPYSAASITAQLP--NFPHPLKPTLQISPRPLRPRSRPS 58

Query: 165 IAMSSYQPVPATERLISACAYFLPFFNGLQYGRYLFMKYPSLGLLIEPIFPLLKAYRSVP 344
           I MS Y  VPATERLISA AY LPFFNGLQYGR+L M+YP+LGL++EPI P+L  YRS+P
Sbjct: 59  ITMS-YSAVPATERLISAAAYCLPFFNGLQYGRFLLMQYPALGLVLEPILPILSLYRSIP 117

Query: 345 YASFVAFFALYLGVVKNPSFSKYVRFNSMQXXXXXXXXXXXXXFQRIFSPDK-GLGLQLL 521
           YASFVAFFALYLGVV+NPSFS++VRFNSMQ               RIF+P + G+G +L+
Sbjct: 118 YASFVAFFALYLGVVRNPSFSRFVRFNSMQAVVLDVLLVVPLLVNRIFNPGRAGVGFRLM 177

Query: 522 VMGYNGIFVFIVFCFLYSLGFCVLGRTPYLPFVADAADRQL 644
           VMG+N IFVF+V CFLYSLGFC+LGRTPYLPFVADAA RQL
Sbjct: 178 VMGHNAIFVFVVACFLYSLGFCILGRTPYLPFVADAAGRQL 218


>ref|XP_002328962.1| predicted protein [Populus trichocarpa] gi|118482664|gb|ABK93251.1|
           unknown [Populus trichocarpa]
           gi|222839196|gb|EEE77547.1| predicted protein [Populus
           trichocarpa]
          Length = 209

 Score =  221 bits (563), Expect = 1e-55
 Identities = 118/218 (54%), Positives = 147/218 (67%), Gaps = 5/218 (2%)
 Frame = +3

Query: 6   MAATTLLRFSLHPSPQTLKS--PFISHTP--LPHYNFPAPRISPIKLSHKSSNSKPIIAM 173
           MA+ +LLR SL P+P+TL    PF S  P   P   FP       +LS KS+     +  
Sbjct: 1   MASISLLRLSLIPTPKTLSKSHPFSSFNPPLTPFLKFPPKT----RLSQKST-----VTR 51

Query: 174 SSYQPVPATERLISACAYFLPFFNGLQYGRYLFMKYPSLGLLIEPIFPLLKAYRSVPYAS 353
            SY P PAT+RL+SA +Y LPFFN LQYGR+LF  YPSL LL++P+ PLL  YRS+PYAS
Sbjct: 52  MSYNPTPATDRLVSAVSYTLPFFNSLQYGRFLFTTYPSLALLVDPLIPLLSLYRSIPYAS 111

Query: 354 FVAFFALYLGVVKNPSFSKYVRFNSMQXXXXXXXXXXXXXFQRIFSPDK-GLGLQLLVMG 530
           FVAFFALYLGVV+NPSFS+YVRFN+MQ               RI SP + GLG +L+V G
Sbjct: 112 FVAFFALYLGVVRNPSFSQYVRFNAMQAVTLDVLLVVPLLLTRILSPGRAGLGFKLMVWG 171

Query: 531 YNGIFVFIVFCFLYSLGFCVLGRTPYLPFVADAADRQL 644
           +N +F+F  FCF+Y L   VLG+TPYLPF+A+AA RQ+
Sbjct: 172 HNALFLFSCFCFVYGLASSVLGKTPYLPFIAEAAGRQV 209


>ref|XP_004139099.1| PREDICTED: protein TIC 20-II, chloroplastic-like [Cucumis sativus]
           gi|449485336|ref|XP_004157137.1| PREDICTED: protein TIC
           20-II, chloroplastic-like [Cucumis sativus]
          Length = 208

 Score =  211 bits (538), Expect = 1e-52
 Identities = 109/214 (50%), Positives = 142/214 (66%), Gaps = 1/214 (0%)
 Frame = +3

Query: 6   MAATTLLRFSLHPSPQTLKSPFISHTPLPHYNFPAPRISPIKLSHKSSNSKPIIAMSSYQ 185
           ++A T +R +L P    +KS    H+ LP     +P+ +PI++S              Y 
Sbjct: 11  LSAKTSIRAALFPHSSAIKSRH--HSSLPFLPSKSPKFTPIRMS--------------YN 54

Query: 186 PVPATERLISACAYFLPFFNGLQYGRYLFMKYPSLGLLIEPIFPLLKAYRSVPYASFVAF 365
           P PAT+RLISA AY LPFFN LQYGR+LF +YP+LG   EP+ P+L  YRS+P++SFVAF
Sbjct: 55  PTPATDRLISAVAYTLPFFNSLQYGRFLFAQYPALGFAFEPLLPILGLYRSIPHSSFVAF 114

Query: 366 FALYLGVVKNPSFSKYVRFNSMQXXXXXXXXXXXXXFQRIFSPDK-GLGLQLLVMGYNGI 542
           FALYLGVV+NPSF+ YVRFNSMQ              QRI SP + G+G +++V  +NG+
Sbjct: 115 FALYLGVVRNPSFNHYVRFNSMQAVTLDVLLVVPLLIQRILSPGRSGIGFKIMVWSHNGL 174

Query: 543 FVFIVFCFLYSLGFCVLGRTPYLPFVADAADRQL 644
           FVF V CFLYS+  C+LGRTP+LP VADAA RQ+
Sbjct: 175 FVFSVLCFLYSVVSCLLGRTPHLPIVADAAGRQI 208


>ref|NP_566112.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75100577|sp|O82251.1|TI202_ARATH RecName:
           Full=Protein TIC 20-II, chloroplastic; AltName:
           Full=Translocon at the inner envelope membrane of
           chloroplasts 20-II; Short=AtTIC20-II; Flags: Precursor
           gi|3738296|gb|AAC63638.1| expressed protein [Arabidopsis
           thaliana] gi|330255801|gb|AEC10895.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 208

 Score =  197 bits (500), Expect = 3e-48
 Identities = 105/209 (50%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
 Frame = +3

Query: 24  LRFSLHPSPQTLKSPFISHTPLPHYNFPAPRISPIKLSHKSSNSKPIIAMSSYQPVPATE 203
           L  SLH   QTL +P  +    P  +   P  S   +   S  +  +   +SY P PATE
Sbjct: 4   LCLSLH---QTLTNPLSAPRCRP-LSLSFPGSSTFSIRPSSRRATALTTRASYTPTPATE 59

Query: 204 RLISACAYFLPFFNGLQYGRYLFMKYPSLGLLIEPIFPLLKAYRSVPYASFVAFFALYLG 383
           R+IS  +Y LPFFN LQYGR+LF +YP LGLL EPIFP+L  YRSVPYASFVAFF LYLG
Sbjct: 60  RVISIASYALPFFNSLQYGRFLFAQYPRLGLLFEPIFPILNLYRSVPYASFVAFFGLYLG 119

Query: 384 VVKNPSFSKYVRFNSMQXXXXXXXXXXXXXFQRIFSPDK--GLGLQLLVMGYNGIFVFIV 557
           VV+N SFS+YVRFN+MQ               RI  P +  G G++ ++ G+ G+FVF  
Sbjct: 120 VVRNTSFSRYVRFNAMQAVTLDVLLAVPVLLTRILDPGQGGGFGMKAMMWGHTGVFVFSF 179

Query: 558 FCFLYSLGFCVLGRTPYLPFVADAADRQL 644
            CF+Y +   +LG+TPY+PFVADAA RQL
Sbjct: 180 MCFVYGVVSSLLGKTPYIPFVADAAGRQL 208


>ref|XP_002882135.1| hypothetical protein ARALYDRAFT_483969 [Arabidopsis lyrata subsp.
           lyrata] gi|297327974|gb|EFH58394.1| hypothetical protein
           ARALYDRAFT_483969 [Arabidopsis lyrata subsp. lyrata]
          Length = 209

 Score =  196 bits (499), Expect = 4e-48
 Identities = 102/209 (48%), Positives = 130/209 (62%), Gaps = 2/209 (0%)
 Frame = +3

Query: 24  LRFSLHPSPQTLKSPFISHTPLPHYNFPAPRISPIKLSHKSSNSKPIIAMSSYQPVPATE 203
           L  SLH +  T     +   PL   +   P  S + +      +  +   +SY P PATE
Sbjct: 4   LCLSLHQTLNTNPLAALRGRPL---SLSFPGSSTVSIRPSGRRATAVTTRASYTPTPATE 60

Query: 204 RLISACAYFLPFFNGLQYGRYLFMKYPSLGLLIEPIFPLLKAYRSVPYASFVAFFALYLG 383
           R+IS  +Y LPFFN LQYGR+LF +YP LGLL EPIFP+L  YRSVPYASFVAFF LYLG
Sbjct: 61  RVISIASYALPFFNSLQYGRFLFAQYPRLGLLFEPIFPILNLYRSVPYASFVAFFGLYLG 120

Query: 384 VVKNPSFSKYVRFNSMQXXXXXXXXXXXXXFQRIFSPDK--GLGLQLLVMGYNGIFVFIV 557
           VV+N S S+YVRFN+MQ               RI  P +  G G++ ++ G+ G+FVF  
Sbjct: 121 VVRNTSLSRYVRFNAMQAVTLDVLLAVPVLLTRILDPGQGGGFGMKAMMWGHTGVFVFSS 180

Query: 558 FCFLYSLGFCVLGRTPYLPFVADAADRQL 644
            CF+Y +  C+LG+TPY+PFVADAA RQL
Sbjct: 181 MCFVYGVVSCLLGKTPYIPFVADAAGRQL 209