BLASTX nr result

ID: Coptis21_contig00009955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009955
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280849.1| PREDICTED: UPF0136 membrane protein At2g2624...   116   2e-24
ref|XP_004151955.1| PREDICTED: UPF0136 membrane protein At2g2624...   108   6e-22
ref|NP_001235243.1| uncharacterized protein LOC100306195 [Glycin...   106   2e-21
ref|XP_002319838.1| predicted protein [Populus trichocarpa] gi|1...   106   2e-21
ref|XP_002317590.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21

>ref|XP_002280849.1| PREDICTED: UPF0136 membrane protein At2g26240 [Vitis vinifera]
           gi|297737418|emb|CBI26619.3| unnamed protein product
           [Vitis vinifera]
          Length = 119

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/75 (76%), Positives = 63/75 (84%)
 Frame = -3

Query: 284 YAKKGSTASLAGGCATGFILIFAGVLSLNAFKKWKNSPLALLLQTVCAVVLTWIMGQRYL 105
           YAKKGS ASL GG  TGF+LI AG LSL AFKK KNS LAL+L+TVCA  LTW+MGQRY+
Sbjct: 22  YAKKGSLASLGGGLGTGFVLILAGYLSLKAFKKKKNSYLALILETVCAAALTWVMGQRYM 81

Query: 104 QTSKIMPAGVVAAIS 60
           QTSKIMPAG+VA IS
Sbjct: 82  QTSKIMPAGIVAGIS 96


>ref|XP_004151955.1| PREDICTED: UPF0136 membrane protein At2g26240-like [Cucumis
           sativus] gi|449489972|ref|XP_004158473.1| PREDICTED:
           UPF0136 membrane protein At2g26240-like [Cucumis
           sativus]
          Length = 119

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/75 (73%), Positives = 60/75 (80%)
 Frame = -3

Query: 284 YAKKGSTASLAGGCATGFILIFAGVLSLNAFKKWKNSPLALLLQTVCAVVLTWIMGQRYL 105
           Y +KGS  SLAGG  TG  LI AG LSL AFKK KNS LAL+L+TVC+  LTW+MGQRYL
Sbjct: 22  YLRKGSIVSLAGGVGTGLALILAGYLSLGAFKKKKNSYLALILETVCSGALTWVMGQRYL 81

Query: 104 QTSKIMPAGVVAAIS 60
           QTSKIMPAGVVA IS
Sbjct: 82  QTSKIMPAGVVAGIS 96


>ref|NP_001235243.1| uncharacterized protein LOC100306195 [Glycine max]
           gi|255627833|gb|ACU14261.1| unknown [Glycine max]
          Length = 119

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/75 (72%), Positives = 60/75 (80%)
 Frame = -3

Query: 284 YAKKGSTASLAGGCATGFILIFAGVLSLNAFKKWKNSPLALLLQTVCAVVLTWIMGQRYL 105
           Y  KGS ASLAGG  +G +LI AG LSLNAF K KNS LAL L+TVCA +LTW+MGQRYL
Sbjct: 22  YISKGSIASLAGGVGSGLLLIVAGYLSLNAFGKRKNSYLALFLETVCAAILTWVMGQRYL 81

Query: 104 QTSKIMPAGVVAAIS 60
            TSKIMPAG+VA IS
Sbjct: 82  GTSKIMPAGLVAGIS 96


>ref|XP_002319838.1| predicted protein [Populus trichocarpa] gi|118488838|gb|ABK96229.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222858214|gb|EEE95761.1| predicted protein [Populus
           trichocarpa]
          Length = 119

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/75 (69%), Positives = 61/75 (81%)
 Frame = -3

Query: 284 YAKKGSTASLAGGCATGFILIFAGVLSLNAFKKWKNSPLALLLQTVCAVVLTWIMGQRYL 105
           Y KKGS ASL GG  TG +LIFAG LSL AF+K KNS L L ++TVCA +LT++MGQRY+
Sbjct: 22  YLKKGSMASLGGGAGTGLVLIFAGYLSLKAFEKRKNSFLGLAIETVCAAILTFVMGQRYM 81

Query: 104 QTSKIMPAGVVAAIS 60
           QTSKIMPAG+VA IS
Sbjct: 82  QTSKIMPAGIVAGIS 96


>ref|XP_002317590.1| predicted protein [Populus trichocarpa] gi|222860655|gb|EEE98202.1|
           predicted protein [Populus trichocarpa]
          Length = 119

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/75 (69%), Positives = 60/75 (80%)
 Frame = -3

Query: 284 YAKKGSTASLAGGCATGFILIFAGVLSLNAFKKWKNSPLALLLQTVCAVVLTWIMGQRYL 105
           Y +KGS ASL GG  TG +LIFAG LSL AF K KNS L L ++TVCA VLT++MGQRY+
Sbjct: 22  YLRKGSVASLGGGVGTGLVLIFAGYLSLKAFSKGKNSFLGLAIETVCAAVLTFVMGQRYM 81

Query: 104 QTSKIMPAGVVAAIS 60
           QTSKIMPAG+VA IS
Sbjct: 82  QTSKIMPAGIVAGIS 96


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