BLASTX nr result

ID: Coptis21_contig00009954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009954
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280849.1| PREDICTED: UPF0136 membrane protein At2g2624...   209   3e-52
ref|NP_001235243.1| uncharacterized protein LOC100306195 [Glycin...   193   2e-47
ref|XP_004151955.1| PREDICTED: UPF0136 membrane protein At2g2624...   192   4e-47
ref|XP_002319838.1| predicted protein [Populus trichocarpa] gi|1...   192   4e-47
ref|XP_002522968.1| transmembrane protein 14, putative [Ricinus ...   191   8e-47

>ref|XP_002280849.1| PREDICTED: UPF0136 membrane protein At2g26240 [Vitis vinifera]
           gi|297737418|emb|CBI26619.3| unnamed protein product
           [Vitis vinifera]
          Length = 119

 Score =  209 bits (533), Expect = 3e-52
 Identities = 100/119 (84%), Positives = 109/119 (91%)
 Frame = -2

Query: 602 MHDFCFTIPYGLLLLSGGVIGYAKKGSTASLAGGCGTGFILILAGVLSLNAFKKRKNSPL 423
           MHDFCFTIPYGL+L+ GG++GYAKKGS ASL GG GTGF+LILAG LSL AFKK+KNS L
Sbjct: 1   MHDFCFTIPYGLVLVGGGIVGYAKKGSLASLGGGLGTGFVLILAGYLSLKAFKKKKNSYL 60

Query: 422 ALVLETVCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 246
           AL+LETVCA  LTWVMGQRY+QTSKIMPAG+VAGISALMT FYLYKIATGGNHIPTKAE
Sbjct: 61  ALILETVCAAALTWVMGQRYMQTSKIMPAGIVAGISALMTTFYLYKIATGGNHIPTKAE 119


>ref|NP_001235243.1| uncharacterized protein LOC100306195 [Glycine max]
           gi|255627833|gb|ACU14261.1| unknown [Glycine max]
          Length = 119

 Score =  193 bits (491), Expect = 2e-47
 Identities = 94/119 (78%), Positives = 104/119 (87%)
 Frame = -2

Query: 602 MHDFCFTIPYGLLLLSGGVIGYAKKGSTASLAGGCGTGFILILAGVLSLNAFKKRKNSPL 423
           MHDFCFTIPYGL+L+ GG+  Y  KGS ASLAGG G+G +LI+AG LSLNAF KRKNS L
Sbjct: 1   MHDFCFTIPYGLMLVGGGLFAYISKGSIASLAGGVGSGLLLIVAGYLSLNAFGKRKNSYL 60

Query: 422 ALVLETVCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 246
           AL LETVCA +LTWVMGQRYL TSKIMPAG+VAGISALMT FYLYK+ATGGNH+PTKAE
Sbjct: 61  ALFLETVCAAILTWVMGQRYLGTSKIMPAGLVAGISALMTLFYLYKLATGGNHLPTKAE 119


>ref|XP_004151955.1| PREDICTED: UPF0136 membrane protein At2g26240-like [Cucumis
           sativus] gi|449489972|ref|XP_004158473.1| PREDICTED:
           UPF0136 membrane protein At2g26240-like [Cucumis
           sativus]
          Length = 119

 Score =  192 bits (489), Expect = 4e-47
 Identities = 94/119 (78%), Positives = 103/119 (86%)
 Frame = -2

Query: 602 MHDFCFTIPYGLLLLSGGVIGYAKKGSTASLAGGCGTGFILILAGVLSLNAFKKRKNSPL 423
           MHDFCFTIPYGL+L+ GG+ GY +KGS  SLAGG GTG  LILAG LSL AFKK+KNS L
Sbjct: 1   MHDFCFTIPYGLILVGGGIFGYLRKGSIVSLAGGVGTGLALILAGYLSLGAFKKKKNSYL 60

Query: 422 ALVLETVCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 246
           AL+LETVC+  LTWVMGQRYLQTSKIMPAGVVAGIS+LMT FYLYK+ATGGNHI  KAE
Sbjct: 61  ALILETVCSGALTWVMGQRYLQTSKIMPAGVVAGISSLMTLFYLYKLATGGNHISPKAE 119


>ref|XP_002319838.1| predicted protein [Populus trichocarpa] gi|118488838|gb|ABK96229.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222858214|gb|EEE95761.1| predicted protein [Populus
           trichocarpa]
          Length = 119

 Score =  192 bits (489), Expect = 4e-47
 Identities = 94/119 (78%), Positives = 103/119 (86%)
 Frame = -2

Query: 602 MHDFCFTIPYGLLLLSGGVIGYAKKGSTASLAGGCGTGFILILAGVLSLNAFKKRKNSPL 423
           MHDFCFTIPYGL+L+ GGVIGY KKGS ASL GG GTG +LI AG LSL AF+KRKNS L
Sbjct: 1   MHDFCFTIPYGLVLVIGGVIGYLKKGSMASLGGGAGTGLVLIFAGYLSLKAFEKRKNSFL 60

Query: 422 ALVLETVCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 246
            L +ETVCA +LT+VMGQRY+QTSKIMPAG+VAGISALMT FYLYKIA GGNHIP KAE
Sbjct: 61  GLAIETVCAAILTFVMGQRYMQTSKIMPAGIVAGISALMTLFYLYKIAAGGNHIPAKAE 119


>ref|XP_002522968.1| transmembrane protein 14, putative [Ricinus communis]
           gi|223537780|gb|EEF39398.1| transmembrane protein 14,
           putative [Ricinus communis]
          Length = 119

 Score =  191 bits (486), Expect = 8e-47
 Identities = 93/119 (78%), Positives = 103/119 (86%)
 Frame = -2

Query: 602 MHDFCFTIPYGLLLLSGGVIGYAKKGSTASLAGGCGTGFILILAGVLSLNAFKKRKNSPL 423
           MHDFC TIPYGL+L+ GGVIGY K+GS ASL GG GTG +L+LAG LSL AF KRKNS L
Sbjct: 1   MHDFCLTIPYGLILIVGGVIGYLKRGSMASLGGGVGTGLLLLLAGYLSLKAFGKRKNSYL 60

Query: 422 ALVLETVCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 246
           AL +ETVCA VLT+VMGQRY+QTSKIMPAG+V GISALMTGFYL+KIAT GNHIP KAE
Sbjct: 61  ALAIETVCAAVLTFVMGQRYMQTSKIMPAGIVGGISALMTGFYLFKIATSGNHIPAKAE 119


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