BLASTX nr result

ID: Coptis21_contig00009940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009940
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269123.1| PREDICTED: uncharacterized protein LOC100251...   200   2e-49
ref|XP_002310782.1| predicted protein [Populus trichocarpa] gi|2...   199   2e-49
ref|XP_004164470.1| PREDICTED: pentatricopeptide repeat-containi...   198   5e-49
ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containi...   198   7e-49
ref|XP_002533269.1| conserved hypothetical protein [Ricinus comm...   197   1e-48

>ref|XP_002269123.1| PREDICTED: uncharacterized protein LOC100251398 [Vitis vinifera]
           gi|297735214|emb|CBI17576.3| unnamed protein product
           [Vitis vinifera]
          Length = 350

 Score =  200 bits (508), Expect = 2e-49
 Identities = 99/162 (61%), Positives = 121/162 (74%), Gaps = 2/162 (1%)
 Frame = -2

Query: 597 QVTKAIQGIIPLSLPQPNDPRRQXXXXXXXXXXEIDKQADSLVRKELWAGLGFLVVQTAG 418
           QV KAIQG+IP+ +   ND R++           IDK+A+SLVR+ELW GLGF +VQT G
Sbjct: 186 QVAKAIQGLIPMPVSFQNDERKEELEGMERQKVVIDKEAESLVRRELWCGLGFFMVQTLG 245

Query: 417 FVRLTFWELSWDVMEPICFYLTSIYFMAGYAFFLRTSKDPSFEGFFESRFSAKQKRLMKI 238
           F+RLTFWELSWDVMEPICF++TSIYFMAGY+FFL+TSK+PSFEGFF+SRF AKQKRLMK 
Sbjct: 246 FMRLTFWELSWDVMEPICFFVTSIYFMAGYSFFLKTSKEPSFEGFFQSRFLAKQKRLMKS 305

Query: 237 KKFDIQRFEELRRAC--YPLSLEPPSSNYPAFDTSDRNLIGA 118
           K FD+ R+ ELR+AC  Y  S E  SS       S+R  +G+
Sbjct: 306 KNFDVGRYNELRKACQSYSSSSEQASSTTSLLYDSERMPLGS 347


>ref|XP_002310782.1| predicted protein [Populus trichocarpa] gi|222853685|gb|EEE91232.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  199 bits (507), Expect = 2e-49
 Identities = 90/138 (65%), Positives = 114/138 (82%)
 Frame = -2

Query: 597 QVTKAIQGIIPLSLPQPNDPRRQXXXXXXXXXXEIDKQADSLVRKELWAGLGFLVVQTAG 418
           QV KAI G+IPL    PNDPRR+           ID++A +LVR+ELW GLGFL++QTAG
Sbjct: 187 QVLKAIGGLIPLPATDPNDPRRKELQEMEKQKAVIDQKAGTLVRRELWCGLGFLILQTAG 246

Query: 417 FVRLTFWELSWDVMEPICFYLTSIYFMAGYAFFLRTSKDPSFEGFFESRFSAKQKRLMKI 238
           F+RLTFWEL+WDVMEPICFY+TS YF+AGY FFLRTSK+PSFEGF++SRFSAKQK+LMK+
Sbjct: 247 FMRLTFWELTWDVMEPICFYVTSFYFVAGYTFFLRTSKEPSFEGFYQSRFSAKQKQLMKL 306

Query: 237 KKFDIQRFEELRRACYPL 184
             F+++R++ELR+ C+PL
Sbjct: 307 NNFNMERYDELRKICHPL 324


>ref|XP_004164470.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Cucumis sativus]
          Length = 361

 Score =  198 bits (504), Expect = 5e-49
 Identities = 97/157 (61%), Positives = 119/157 (75%), Gaps = 2/157 (1%)
 Frame = -2

Query: 597 QVTKAIQGIIPLSLPQPNDPRRQXXXXXXXXXXEIDKQADSLVRKELWAGLGFLVVQTAG 418
           QVTK I+G+IPL    PND  R+           IDK+A++L R+ELW GLGFLV QTA 
Sbjct: 197 QVTKVIEGLIPLPSVIPNDAIRKEFEAMEIQKAAIDKRAETLTRRELWCGLGFLVAQTAA 256

Query: 417 FVRLTFWELSWDVMEPICFYLTSIYFMAGYAFFLRTSKDPSFEGFFESRFSAKQKRLMKI 238
           F+RLTFWEL+WDVMEPICFY+TS YF+AGY FFL+TSK+PSFEGFF+SRFS KQKRLMK+
Sbjct: 257 FMRLTFWELTWDVMEPICFYVTSGYFIAGYTFFLKTSKEPSFEGFFQSRFSTKQKRLMKL 316

Query: 237 KKFDIQRFEELRRACYPLS--LEPPSSNYPAFDTSDR 133
           + FDI R+ +LRRAC+P S   E PSS+   +D S +
Sbjct: 317 QNFDIARYNKLRRACFPNSSAQELPSSDSMVYDNSTK 353


>ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like
            [Cucumis sativus]
          Length = 1058

 Score =  198 bits (503), Expect = 7e-49
 Identities = 97/158 (61%), Positives = 119/158 (75%), Gaps = 3/158 (1%)
 Frame = -2

Query: 597  QVTKAIQGIIPLSLPQPNDPRRQXXXXXXXXXXEIDKQADSLVRKELWAGLGFLVVQTAG 418
            QVTKAI+G+IPL    PND  R+           IDK+A++L R+ELW GLGFLV QTA 
Sbjct: 893  QVTKAIEGLIPLPSVIPNDAIRKEFEAMEIQKAAIDKRAETLTRRELWCGLGFLVAQTAA 952

Query: 417  FVRLTFWELSWDVMEPICFYLTSIYFMAGYAFFLRTSKDPSFEGFFESRFSAKQKRLMKI 238
            F+RLTFWEL+WDVMEPICFY+TS YF+AGY FFL+TSK+PSFEGFF+SRFS KQKRLMK+
Sbjct: 953  FMRLTFWELTWDVMEPICFYVTSGYFIAGYTFFLKTSKEPSFEGFFQSRFSTKQKRLMKL 1012

Query: 237  KKFDIQRFEELRRACYPLSLE---PPSSNYPAFDTSDR 133
            + FDI R+ +LRRAC+P S     P SS+   +D S +
Sbjct: 1013 QNFDIARYNKLRRACFPNSSAQELPSSSDSMVYDNSTK 1050


>ref|XP_002533269.1| conserved hypothetical protein [Ricinus communis]
           gi|223526894|gb|EEF29101.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 346

 Score =  197 bits (501), Expect = 1e-48
 Identities = 90/137 (65%), Positives = 112/137 (81%)
 Frame = -2

Query: 597 QVTKAIQGIIPLSLPQPNDPRRQXXXXXXXXXXEIDKQADSLVRKELWAGLGFLVVQTAG 418
           QV KAI G+IPL    PNDPRR+           ID++AD+LVR+ELW GLG+LVVQTA 
Sbjct: 195 QVVKAIGGLIPLPATNPNDPRRKELEEMEKKKVVIDRKADTLVRRELWCGLGYLVVQTAA 254

Query: 417 FVRLTFWELSWDVMEPICFYLTSIYFMAGYAFFLRTSKDPSFEGFFESRFSAKQKRLMKI 238
           F+RLTFWEL+WDVMEPICFY+TS+Y MAGYAFFLRTSK+PSFEGF++SRF+AKQ+RLMK+
Sbjct: 255 FMRLTFWELTWDVMEPICFYVTSMYCMAGYAFFLRTSKEPSFEGFYQSRFNAKQQRLMKL 314

Query: 237 KKFDIQRFEELRRACYP 187
             FD +R+++L + CYP
Sbjct: 315 HNFDAKRYQQLLKICYP 331


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